EY688622

Overview
NameEY688622
Unique NameEY688622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: NED4L_PONAB (E3 ubiquitin-protein ligase NEDD4-like OS=Pongo abelii GN=NEDD4L PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.028e-24
Identity = 61/193 (31.61%), Postives = 108/193 (55.96%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYL-ENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +SK  F P YGLF  ++T +  L  N  +    E+ +  F F+GRV G A++ G LLD  F   F + +LG+   L+++ ++D E Y +L ++   + D  EL L F + EE+FG+ + ++L+P G +  VTN+NK +Y+  +  ++   ++    NAF  G T+L+    +K F+ +E    + G
Sbjct:  648 AREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWI--LENDPTELDLMFCIDEENFGQTYQVDLEPNGSEIMVTNENKREYIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCG 838          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: PTR1_SCHPO (E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe GN=ptr1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.870e-24
Identity = 59/193 (30.57%), Postives = 106/193 (54.92%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCL-DFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+L  +++  F P+Y LF   +       PN  +    + +  F+F GR++GKALY+G LLD  FS    + +L R   + ++ +LDP+ Y++L+++   + D+ ++   +F V ++ FG++ V++L P G +  VT  NK  YV+ M DYKL   +     +   G +D+I    ++ FN  E    +SG
Sbjct: 2916 TREWLQVLARQMFNPDYALFLPVTGDATTFHPNRDSSVNPDHLSFFKFTGRIIGKALYDGRLLDCHFSRAVYKHMLHRSVSVKDIESLDPDYYKSLVWM--LNNDITDIITEEFAVEKDVFGEKTVVDLIPNGRNIPVTELNKQNYVNRMVDYKLRESVKDQLKSLLDGFSDIIPSHLIQIFNEQELELLISG 3106          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HUL5_YEAST (Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae GN=HUL5 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.870e-24
Identity = 78/200 (39.00%), Postives = 115/200 (57.50%), Query Frame = 2
Query:    2 SKEFLTDISKSAFA-PEYGLFSQTSTSDRL-LIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLL----GRYSFLDELSTLDPELYRNLMYVKHYDGD-VKELCLDFTVTE-ESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            +KEFLT +S   F  P++ LF    T+DR  L P+    Y    ++   FLG+VVGK LYE +L+D +F+  F++KLL    G  S   +L + D  LY NL+ + +   D +K L L F + E ES  K  V++L P G  T VT DN + YV  + DYKLN++ F   +AF+ GL+ +I+P  ++ FN+ E    +SG
Sbjct:  602 TKEFLTTVSDEGFKDPKHELFR---TNDRYELYPSVV--YDATKLKYIWFLGKVVGKCLYEHVLIDVSFADFFLKKLLNYSNGFLSSFSDLGSYDSVLYNNLIKLLNMTTDEIKSLDLTFEIDEPESSAK--VVDLIPNGSKTYVTKDNVLLYVTKVTDYKLNKRCFKPVSAFHGGLSVIIAPHWMEMFNSIELQMLISG 794          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: NEDD4_RAT (E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus GN=Nedd4 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.999e-23
Identity = 66/195 (33.85%), Postives = 104/195 (53.33%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLI---PNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   ISK  F P YGLF  ++T D   +   PN+     E+ +  F+F+GRV G A+Y G LLD  F   F + +L +   L ++ ++D E Y +L ++   + D  EL L F + EE FG+ H  ELK GG +  VTN NK +Y++ +  ++   +I     AF  G  +LI    +K F+ +E    + G
Sbjct:  575 AREWFFLISKEMFNPYYGLFEYSATEDNYTLQINPNSGLCN-EDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLQKLITLHDMESVDSEYYSSLRWI--LENDPTELDLRFIIDEELFGQTHQHELKTGGSEVVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCG 766          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: NEDD4_MOUSE (E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus GN=Nedd4 PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 7.596e-23
Identity = 65/193 (33.68%), Postives = 103/193 (53.37%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYL-ENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   ISK  F P YGLF  ++T +  L  N  +    E+ +  F+F+GRV G A+Y G LLD  F   F + +L +   L ++ ++D E Y +L ++   + D  EL L F + EE FG+ H  ELK GG +  VTN NK +Y++ +  ++   +I     AF  G  +LI    +K F+ +E    + G
Sbjct:  576 AREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLQKLITLHDMESVDSEYYSSLRWI--LENDPTELDLRFIIDEELFGQTHQHELKTGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCG 766          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HECW1_HUMAN (E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens GN=HECW1 PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 9.921e-23
Identity = 64/193 (33.16%), Postives = 104/193 (53.89%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKE-LCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            S+EF   +S+  F P YGLF  ++     +  +  + ++EN ++ F F GR++G AL    LLD  F+  F + LL     L +L  LD E +++L ++K  D ++ + L L FTV EE FG+    ELK GG +T VT  NK +Y+  M  +++ R +   + A  RG  +++    V  F+A E    ++G
Sbjct: 1296 SREFFFLLSQELFNPYYGLFEYSANDTYTVQISPMSAFVENHLEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRLPCDLSDLEYLDEEFHQSLQWMK--DNNITDILDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYIERMVKWRVERGVVQQTEALVRGFYEVVDSRLVSVFDARELELVIAG 1486          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: NEDD4_HUMAN (E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens GN=NEDD4 PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.296e-22
Identity = 65/193 (33.68%), Postives = 103/193 (53.37%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYL-ENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   ISK  F P YGLF  ++T +  L  N  +    E+ +  F+F+GRV G A+Y G LLD  F   F + +L +   L ++ ++D E Y +L ++   + D  EL L F + EE FG+ H  ELK GG +  VTN NK +Y++ +  ++   +I     AF  G  +LI    +K F+ +E    + G
Sbjct: 1008 AREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLHKPITLHDMESVDSEYYNSLRWI--LENDPTELDLRFIIDEELFGQTHQHELKNGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCG 1198          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HECW2_MOUSE (E3 ubiquitin-protein ligase HECW2 OS=Mus musculus GN=Hecw2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.296e-22
Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKE-LCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            S+EF   +S+  F P YGLF  ++     +  +  + +++N  + F F GR++G AL    LLD  F+  F + LL     L +L  LD E +++L ++K  D D+ + L L FTV EE FG+    ELKPGG +  VT  NK +Y+  M  +++ R +   + +  RG  +++    V  F+A E    ++G
Sbjct: 1268 SREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRILCDLSDLEYLDEEFHQSLQWMK--DNDIHDILDLTFTVNEEVFGQITERELKPGGANIPVTEKNKKEYIERMVKWRIERGVVQQTESLVRGFYEVVDARLVSVFDARELELVIAG 1458          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HECW2_HUMAN (E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens GN=HECW2 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.296e-22
Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKE-LCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            S+EF   +S+  F P YGLF  ++     +  +  + +++N  + F F GR++G AL    LLD  F+  F + LL     L +L  LD E +++L ++K  D D+ + L L FTV EE FG+    ELKPGG +  VT  NK +Y+  M  +++ R +   + +  RG  +++    V  F+A E    ++G
Sbjct: 1262 SREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRILCDLSDLEYLDEEFHQSLQWMK--DNDIHDILDLTFTVNEEVFGQITERELKPGGANIPVTEKNKKEYIERMVKWRIERGVVQQTESLVRGFYEVVDARLVSVFDARELELVIAG 1452          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.692e-22
Identity = 56/193 (29.02%), Postives = 106/193 (54.92%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLD-FTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +S+  F P Y LF   S+      PN  +   +  +  F+F+GR++GKALYEG LL+  FS    +++LG+   + ++ + DP+ Y++L+++   + D+ ++  + F+V ++ FG+  V++L   G +  VT +NK +YV  + ++KL   +     AF  G  ++I    +  FN  E    +SG
Sbjct: 3715 TREWFQVLSRQMFDPNYVLFVPVSSDRTTFHPNKLSPINDEHLPFFKFIGRIIGKALYEGRLLECYFSRAVYKRILGKPVSVKDMESFDPDYYKSLVWM--LENDITDIITETFSVEDDVFGEVKVVDLIENGRNIPVTEENKHEYVRLIVEHKLITSVKDQMKAFLTGFHEIIPEELIAIFNEQELELLISG 3905          
The following BLAST results are available for this feature:
BLAST of EY688622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
NED4L_PONAB4.028e-2431.61E3 ubiquitin-protein ligase NEDD4-like OS=Pongo ab... [more]
PTR1_SCHPO6.870e-2430.57E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharo... [more]
HUL5_YEAST6.870e-2439.00Probable E3 ubiquitin-protein ligase HUL5 OS=Sacch... [more]
NEDD4_RAT1.999e-2333.85E3 ubiquitin-protein ligase NEDD4 OS=Rattus norveg... [more]
NEDD4_MOUSE7.596e-2333.68E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus ... [more]
HECW1_HUMAN9.921e-2333.16E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens ... [more]
NEDD4_HUMAN1.296e-2233.68E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens ... [more]
HECW2_MOUSE1.296e-2232.64E3 ubiquitin-protein ligase HECW2 OS=Mus musculus ... [more]
HECW2_HUMAN1.296e-2232.64E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens ... [more]
TOM1_NEUCR1.692e-2229.02E3 ubiquitin-protein ligase TOM1-like OS=Neurospor... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-090-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688622 ID=EY688622; Name=EY688622; organism=Citrus sinensis; type=EST; length=837bp
ATCAAAAGAGTTTTTGACTGATATATCAAAATCAGCTTTTGCTCCTGAGT
ATGGGCTATTTTCCCAAACCTCAACTTCAGACAGGCTCCTGATCCCTAAT
GCTGCCGCAAGATATCTAGAGAACGGTATCCAGATGTTTGAGTTCCTTGG
GAGAGTTGTTGGTAAAGCACTTTATGAAGGGATATTACTTGATTATGCCT
TTTCACATGTTTTTGTGCAAAAGTTGTTAGGCCGATATAGCTTCCTTGAT
GAGCTGTCAACACTTGATCCAGAGCTCTACCGGAATCTAATGTATGTCAA
GCATTATGATGGTGACGTCAAAGAACTGTGTCTGGATTTCACTGTCACAG
AAGAGTCATTTGGTAAACGACATGTTATTGAGCTAAAACCTGGTGGTGGG
GATACTAGTGTGACAAATGACAACAAGATGCAATATGTTCATGCTATGGC
TGATTATAAACTCAACCGGCAGATTTTTCCCTTCTCAAATGCATTTTACA
GAGGGTTAACTGATCTCATATCACCGTCTTGCGTGAAGTGATTTAATGCC
AGCGAATTCCATCAGTTCCTTTCGGGACGAACACATGACCGTAGATGGGT
ATCATTTGGGAGACGATACACGCGCAGACCGCGGCGATGACACACCGGAC
ACGGGACGCACACACATCACCCAGGACGCGAGAGAAGAGAAAACAACGAA
AAAAGAAAGAGAAAAGAAGCAACCAGGGACAACACAACAGACAGAACGCC
ACACCAACGCACCACCAAAAAGAGCAGCACCAGCCGACGCCCGCATCCCC
AAGAATCCCGCCAACAAGCCAACAAAGAGAGACATGA
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