EY688622

Overview
NameEY688622
Unique NameEY688622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HECW1_MOUSE (E3 ubiquitin-protein ligase HECW1 OS=Mus musculus GN=Hecw1 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.692e-22
Identity = 64/193 (33.16%), Postives = 104/193 (53.89%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKE-LCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            S+EF   +S+  F P YGLF  ++     +  +  + ++EN ++ F F GR++G AL    LLD  F+  F + LL     L +L  LD E +++L ++K  D ++ + L L FTV EE FG+    ELK GG +T VT  NK +Y+  M  +++ R +   + A  RG  +++    V  F+A E    ++G
Sbjct: 1294 SREFFFLLSQELFNPYYGLFEYSANDTYTVQISPMSAFVENYLEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLKLPCDLSDLEYLDEEFHQSLQWMK--DNNITDILDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYIERMVKWRVERGVVQQTEALLRGFYEVVDSRLVSVFDARELELVIAG 1484          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: NEDD4_DROME (E3 ubiquitin-protein ligase Nedd-4 OS=Drosophila melanogaster GN=Nedd4 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.924e-22
Identity = 60/193 (31.09%), Postives = 105/193 (54.40%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLL-IPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +SK  F P YGLF  ++  +  L I N +    E  +  F+F+GR+ G A+Y G LLD  F   F + +L +   L ++ ++D E Y +LM++K  D  + E  L F + E+ FG++   ELKPGG +  VTN+NK +Y+  + +++   ++    ++F  G   +I  + +K F+  E    + G
Sbjct:  696 AREWFYLLSKEMFNPYYGLFEYSAMDNYTLQINNGSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWIKENDPRILE--LTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLNLIKIFDEHELELLMCG 886          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: ITCH_HUMAN (E3 ubiquitin-protein ligase Itchy homolog OS=Homo sapiens GN=ITCH PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.097e-21
Identity = 56/192 (29.17%), Postives = 105/192 (54.69%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +S     P Y LF      +  L  N A+    + ++ F F+GR +  AL+ G  +D  FS  F +++L +   L +L ++DPE Y +L++VK  + +  +L + F+V +E  G+    +LKP GG+  VT +NK +Y+  +A+++L+R +   + AF+ G  +++    ++ F+A E    L G
Sbjct:  593 AREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCG 784          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: PUB2_SCHPO (E3 ubiquitin-protein ligase pub2 OS=Schizosaccharomyces pombe GN=pub2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.871e-21
Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSGR 580
            S+EF   +S + F P Y LF   +  +  L  +  +    +    F F+GRV+G A+Y    LD  F   F +++L +   L+++  +D   Y +L ++K+ D D + LCL+F+V E  FG+   ++L P G + +V N NKM Y+ A+ ++KL        NA   GL +LI  S ++ FN +E    L+G+
Sbjct:  362 SREFFYILSHAIFNPGYSLFEYATDDNYGLQISPLSSVNPDFRSYFRFVGRVMGLAIYHRRYLDVQFVLPFYKRILQKPLCLEDVKDVDEVYYESLKWIKNNDVD-ESLCLNFSVEENRFGESVTVDLIPNGRNIAVNNQNKMNYLKALTEHKLVTSTEEQFNALKGGLNELIPDSVLQIFNENELDTLLNGK 553          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: ITCH_MOUSE (E3 ubiquitin-protein ligase Itchy OS=Mus musculus GN=Itch PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.191e-21
Identity = 56/192 (29.17%), Postives = 104/192 (54.17%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +S     P Y LF      +  L  N A+    + ++ F F+GR +  AL+ G  +D  FS  F +++L +   L +L ++DPE Y +L++VK  + +   L + F+V +E  G+    +LKP GG+  VT +NK +Y+  +A+++L+R +   + AF+ G  +++    ++ F+A E    L G
Sbjct:  554 AREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCG 745          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HACE1_XENTR (E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropicalis GN=hace1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.168e-21
Identity = 60/193 (31.09%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLD--FTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            +E+   +S     P+Y LF+Q S       PN+ +    + +  F F G ++G ALY   L++  F+  F + +LG      +++++DPE  +NL ++   D D+ +L L+  F+V  + FG    + LKPGG    VT +NK +YV  + + ++ R I P  N F +G    I PS ++ F+  E    LSG
Sbjct:  601 REWFDILSSEIINPDYALFTQ-SADGTTFQPNSNSSVNPDHLNYFRFAGEILGLALYHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWI--LDNDISDLGLELTFSVETDVFGAMEEVPLKPGGASILVTQENKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQLFDEYELELLLSG 790          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HACE1_XENLA (E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevis GN=hace1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.168e-21
Identity = 60/193 (31.09%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLD--FTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            +E+   +S     P+Y LF+Q S       PN+ +    + +  F F G ++G ALY   L++  F+  F + +LG      +++++DPE  +NL ++   D D+ +L L+  F+V  + FG    + LKPGG    VT +NK +YV  + + ++ R I P  N F +G    I PS ++ F+  E    LSG
Sbjct:  633 REWFDILSSEMINPDYALFTQ-SADGTTFQPNSNSSVNPDHLNYFRFAGEILGLALYHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWI--LDNDISDLGLELTFSVETDVFGAMEEVPLKPGGASILVTQENKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQLFDEYELELLLSG 822          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.444e-21
Identity = 66/201 (32.84%), Postives = 107/201 (53.23%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVI---------ELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +S+  F     LF+ T  +D    PN  + Y    +  F+F+GR+V KAL++G LLD  F+  F + +LG      ++  +DP+ Y+NL ++   + DV ++ LD T + ++  ++H++         ELKPGG +  VT + K +YV  +AD+ L   I P  NAF  GL +LI    V  FN  E    +SG
Sbjct: 3341 TREWYQLLSRVIFDKGALLFT-TVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWL--LENDVSDI-LDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTSAIRPQINAFLEGLNELIPRELVSIFNDKELELLISG 3537          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.444e-21
Identity = 61/193 (31.61%), Postives = 102/193 (52.85%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEES--FGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            +E+   +S     P+Y LF+Q S       PN+ +    + +  F F G+++G AL    L++  F+  F + +LG      +++++DPE  +NL ++   D D+ +L L+ T + E+  FG    + LKPGGG   VT +NK +YV  + + ++ R I P  NAF +G    I PS ++ F+  E    LSG
Sbjct:  598 REWFDILSNEIVNPDYALFTQ-SADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWI--LDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSG 787          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HACE1_HUMAN (E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.444e-21
Identity = 61/193 (31.61%), Postives = 102/193 (52.85%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEES--FGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            +E+   +S     P+Y LF+Q S       PN+ +    + +  F F G+++G AL    L++  F+  F + +LG      +++++DPE  +NL ++   D D+ +L L+ T + E+  FG    + LKPGGG   VT +NK +YV  + + ++ R I P  NAF +G    I PS ++ F+  E    LSG
Sbjct:  598 REWFDILSNEIVNPDYALFTQ-SADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWI--LDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSG 787          
The following BLAST results are available for this feature:
BLAST of EY688622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
HECW1_MOUSE1.692e-2233.16E3 ubiquitin-protein ligase HECW1 OS=Mus musculus ... [more]
NEDD4_DROME4.924e-2231.09E3 ubiquitin-protein ligase Nedd-4 OS=Drosophila m... [more]
ITCH_HUMAN1.097e-2129.17E3 ubiquitin-protein ligase Itchy homolog OS=Homo ... [more]
PUB2_SCHPO1.871e-2132.12E3 ubiquitin-protein ligase pub2 OS=Schizosaccharo... [more]
ITCH_MOUSE3.191e-2129.17E3 ubiquitin-protein ligase Itchy OS=Mus musculus ... [more]
HACE1_XENTR4.168e-2131.09E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropi... [more]
HACE1_XENLA4.168e-2131.09E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevi... [more]
UPL2_ARATH5.444e-2132.84E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis th... [more]
HACE1_MOUSE5.444e-2131.61E3 ubiquitin-protein ligase HACE1 OS=Mus musculus ... [more]
HACE1_HUMAN5.444e-2131.61E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-090-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688622 ID=EY688622; Name=EY688622; organism=Citrus sinensis; type=EST; length=837bp
ATCAAAAGAGTTTTTGACTGATATATCAAAATCAGCTTTTGCTCCTGAGT
ATGGGCTATTTTCCCAAACCTCAACTTCAGACAGGCTCCTGATCCCTAAT
GCTGCCGCAAGATATCTAGAGAACGGTATCCAGATGTTTGAGTTCCTTGG
GAGAGTTGTTGGTAAAGCACTTTATGAAGGGATATTACTTGATTATGCCT
TTTCACATGTTTTTGTGCAAAAGTTGTTAGGCCGATATAGCTTCCTTGAT
GAGCTGTCAACACTTGATCCAGAGCTCTACCGGAATCTAATGTATGTCAA
GCATTATGATGGTGACGTCAAAGAACTGTGTCTGGATTTCACTGTCACAG
AAGAGTCATTTGGTAAACGACATGTTATTGAGCTAAAACCTGGTGGTGGG
GATACTAGTGTGACAAATGACAACAAGATGCAATATGTTCATGCTATGGC
TGATTATAAACTCAACCGGCAGATTTTTCCCTTCTCAAATGCATTTTACA
GAGGGTTAACTGATCTCATATCACCGTCTTGCGTGAAGTGATTTAATGCC
AGCGAATTCCATCAGTTCCTTTCGGGACGAACACATGACCGTAGATGGGT
ATCATTTGGGAGACGATACACGCGCAGACCGCGGCGATGACACACCGGAC
ACGGGACGCACACACATCACCCAGGACGCGAGAGAAGAGAAAACAACGAA
AAAAGAAAGAGAAAAGAAGCAACCAGGGACAACACAACAGACAGAACGCC
ACACCAACGCACCACCAAAAAGAGCAGCACCAGCCGACGCCCGCATCCCC
AAGAATCCCGCCAACAAGCCAACAAAGAGAGACATGA
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