EY688622

Overview
NameEY688622
Unique NameEY688622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: SUDX_DROME (E3 ubiquitin-protein ligase Su(dx) OS=Drosophila melanogaster GN=Su(dx) PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.357e-18
Identity = 56/192 (29.17%), Postives = 97/192 (50.52%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            S+E+   +S     P Y LF   + ++  L  N A+    + +Q F+F+GR +  ALY G  +   F+  F +++L +   + ++ T+DPE Y +L++VK  + D   L L F+V  E  G+    ELK  G    VT +NK +Y+  M ++++ R I   +  F  G  +++    +K F+  E    L G
Sbjct:  639 SREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLKYFDERELELILCG 830          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: SMUF1_DROME (E3 ubiquitin-protein ligase Smurf1 OS=Drosophila melanogaster GN=lack PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 7.357e-18
Identity = 59/194 (30.41%), Postives = 97/194 (50.00%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNL--MYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+L  +S+    P+YGLF  +      L  N  +    + +  F F+GR +G A++ G  LD  F+  F ++LL +   L ++  +DP+L+R+L  M   +  G ++     F+V   SFG   V ELKPGG    VT +NK +YV    +Y+  R I     A  +G  +LI    ++ F+  E    + G
Sbjct:  747 AREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGIIES---TFSVENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGG 937          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.357e-18
Identity = 58/196 (29.59%), Postives = 96/196 (48.98%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHY-DGDVKE-LCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSGRTH 586
            KEF   I +    P+YG+F     S  +   +   +  E+   +F  +G + G A+Y   ++D  F     +KLL R   LD+L  L P + R++  +  Y + D++E  CL+FT+T E+FG   V EL   G DT+V   N+ ++V A  DY  N+ +    +AF+ G   +     +  F  +E    + G T+
Sbjct:  755 KEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD---KTFEDS-DLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNRQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTN 946          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.357e-18
Identity = 57/196 (29.08%), Postives = 97/196 (49.49%), Query Frame = 2
Query:    5 KEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHY-DGDVKE-LCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSGRTH 586
            KEF   I +    P+YG+F     S  +   +   +  E+   +F  +G + G A+Y   ++D  F     +KLL +   LD+L  L P++ R++  +  Y + D++E  CL+FT+T E+FG   V EL   G DT+V   N+ ++V A  DY  N+ +    +AF+ G   +     +  F  +E    + G T+
Sbjct:  755 KEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD---KTFEDS-DLFHLIGVICGLAIYNCTIVDLHFPLALYKKLLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTN 946          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: WWP2_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus musculus GN=Wwp2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.255e-17
Identity = 53/192 (27.60%), Postives = 94/192 (48.96%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +S     P Y LF     ++  L  N A+    + +  F F+GR +  ALY G  +D  F+  F +++L +   L +L ++DPE Y +++++K  + +   L L F    E  GK    ELK GG +  VT +NK +Y+  + D++  R +   + AF  G  ++     ++ F+  E    L G
Sbjct:  560 AREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWIKENNLEECGLELFFIQDMEILGKVTTHELKEGGENIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVAPLEWLRYFDEKELELMLCG 751          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: WWP2_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.639e-17
Identity = 53/192 (27.60%), Postives = 93/192 (48.44%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +S     P Y LF     ++  L  N A+    + +  F F+GR +  ALY G  +D  F+  F +++L +   L +L ++DPE Y +++++K  + +   L L F    E  GK    ELK GG    VT +NK +Y+  + D++  R +   + AF  G  ++     ++ F+  E    L G
Sbjct:  560 AREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWIKENNLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVAPLEWLRYFDEKELELMLCG 751          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: SMUF1_HUMAN (E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens GN=SMURF1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.769e-17
Identity = 55/192 (28.65%), Postives = 99/192 (51.56%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+L  +      P YGLF  ++ +  +L  N  +    + +  F F+GR++G A++ G  ++  F+  F ++LLG+   L +L ++DPEL+++L+++   D     L   F V   +FG+    ELKP G +  VT +NK +YV    +++  R I     A  +G  +LI    +K F+  E    + G
Sbjct:  444 AREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILEND-ITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGG 634          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: SMUF1_XENLA (E3 ubiquitin-protein ligase SMURF1 OS=Xenopus laevis GN=smurf1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.134e-17
Identity = 55/192 (28.65%), Postives = 97/192 (50.52%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+L  +      P YGLF  ++ +   L  N  +    + +  F F+GR++G A++ G  ++  F+  F ++LLG+   L +L ++DPEL+++L+++   D     L   F V   +FG+    ELKP G +  VT +NK +YV    +++  R I     A  +G  +LI    +K F   E    + G
Sbjct:  418 AREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILEND-ITSVLDHTFCVEHNAFGRLLQHELKPNGKNLQVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFEQKELELIIGG 608          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: SMUF1_MOUSE (E3 ubiquitin-protein ligase SMURF1 OS=Mus musculus GN=Smurf1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.062e-16
Identity = 55/192 (28.65%), Postives = 98/192 (51.04%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLDFTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+L  +      P YGLF  ++ +   L  N  +    + +  F F+GR++G A++ G  ++  F+  F ++LLG+   L +L ++DPEL+++L+++   D     L   F V   +FG+    ELKP G +  VT +NK +YV    +++  R I     A  +G  +LI    +K F+  E    + G
Sbjct:  418 AREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILEND-ITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGG 608          
BLAST of EY688622 vs. ExPASy Swiss-Prot
Match: WWP1_MOUSE (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus musculus GN=Wwp1 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.367e-16
Identity = 52/194 (26.80%), Postives = 100/194 (51.55%), Query Frame = 2
Query:    2 SKEFLTDISKSAFAPEYGLFSQTSTSDRLLIPNAAARYLENGIQMFEFLGRVVGKALYEGILLDYAFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKELCLD--FTVTEESFGKRHVIELKPGGGDTSVTNDNKMQYVHAMADYKLNRQIFPFSNAFYRGLTDLISPSCVK*FNASEFHQFLSG 577
            ++E+   +S     P Y LF     ++  L  N A+    + +  F F+GR +  AL+ G  +D  FS  F +++L +   + +L ++D E Y +L++++  D +++E  L+  F+V  E  GK    +LK GG +  VT +NK +Y+  M +++ +R +   + AF  G  +++    ++ F+  E    L G
Sbjct:  608 AREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIR--DNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCG 799          
The following BLAST results are available for this feature:
BLAST of EY688622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
SUDX_DROME7.357e-1829.17E3 ubiquitin-protein ligase Su(dx) OS=Drosophila m... [more]
SMUF1_DROME7.357e-1830.41E3 ubiquitin-protein ligase Smurf1 OS=Drosophila m... [more]
HERC4_MOUSE7.357e-1829.59Probable E3 ubiquitin-protein ligase HERC4 OS=Mus ... [more]
HERC4_HUMAN7.357e-1829.08Probable E3 ubiquitin-protein ligase HERC4 OS=Homo... [more]
WWP2_MOUSE1.255e-1727.60NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Mus... [more]
WWP2_HUMAN1.639e-1727.60NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Hom... [more]
SMUF1_HUMAN4.769e-1728.65E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens... [more]
SMUF1_XENLA8.134e-1728.65E3 ubiquitin-protein ligase SMURF1 OS=Xenopus laev... [more]
SMUF1_MOUSE1.062e-1628.65E3 ubiquitin-protein ligase SMURF1 OS=Mus musculus... [more]
WWP1_MOUSE2.367e-1626.80NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-090-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688622 ID=EY688622; Name=EY688622; organism=Citrus sinensis; type=EST; length=837bp
ATCAAAAGAGTTTTTGACTGATATATCAAAATCAGCTTTTGCTCCTGAGT
ATGGGCTATTTTCCCAAACCTCAACTTCAGACAGGCTCCTGATCCCTAAT
GCTGCCGCAAGATATCTAGAGAACGGTATCCAGATGTTTGAGTTCCTTGG
GAGAGTTGTTGGTAAAGCACTTTATGAAGGGATATTACTTGATTATGCCT
TTTCACATGTTTTTGTGCAAAAGTTGTTAGGCCGATATAGCTTCCTTGAT
GAGCTGTCAACACTTGATCCAGAGCTCTACCGGAATCTAATGTATGTCAA
GCATTATGATGGTGACGTCAAAGAACTGTGTCTGGATTTCACTGTCACAG
AAGAGTCATTTGGTAAACGACATGTTATTGAGCTAAAACCTGGTGGTGGG
GATACTAGTGTGACAAATGACAACAAGATGCAATATGTTCATGCTATGGC
TGATTATAAACTCAACCGGCAGATTTTTCCCTTCTCAAATGCATTTTACA
GAGGGTTAACTGATCTCATATCACCGTCTTGCGTGAAGTGATTTAATGCC
AGCGAATTCCATCAGTTCCTTTCGGGACGAACACATGACCGTAGATGGGT
ATCATTTGGGAGACGATACACGCGCAGACCGCGGCGATGACACACCGGAC
ACGGGACGCACACACATCACCCAGGACGCGAGAGAAGAGAAAACAACGAA
AAAAGAAAGAGAAAAGAAGCAACCAGGGACAACACAACAGACAGAACGCC
ACACCAACGCACCACCAAAAAGAGCAGCACCAGCCGACGCCCGCATCCCC
AAGAATCCCGCCAACAAGCCAACAAAGAGAGACATGA
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