EY688575

Overview
NameEY688575
Unique NameEY688575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length419
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY688575 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11
Identity = 32/87 (36.78%), Postives = 50/87 (57.47%), Query Frame = 3 
Query:    3 PERFL----GPFIDVKGRNFELIPFVAGRRICPGLPLAIRMLYLMLGSLINSFDWKFEDGITQHNMDMEEKFGLTLNKAQPLHAIPI 251
            PERF+    G  +DV+G +  L PF AGRR+CPG  L +  + L +  L++ F+W       +H +D+ E   L+   A+PLH +P+
Sbjct:  460 PERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLPH---AEHPVDLSEVLKLSCEMARPLHCVPV 543
[Close]
BLAST of EY688575 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11
Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 3 
Query:    3 PERFLGPFIDVKGRNFELIPFVAGRRICPGLPLAIRMLYLMLGSLINSFDWKFEDGITQHNMDMEEKFGLTLNKAQPLHAIPI 251
            P+RFL   +D KG +FE +PF  GRRICPG+  A+  + L L  L+  FDW+         ++M+E  G+T+ +   L+  P+
Sbjct:  409 PDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQ----SNTEKLNMKESRGVTVRREDDLYLTPV 487
The following BLAST results are available for this feature:
BLAST of EY688575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
C78A4_PINRA9.714e-1136.78Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71DC_CATRO9.714e-1137.35Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-089-G03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688575 ID=EY688575; Name=EY688575; organism=Citrus sinensis; type=EST; length=419bp
TGCCCGAGAGATTCTTGGGGCCTTTCATTGATGTCAAAGGCCGGAATTTT
GAGTTAATACCATTTGTTGCTGGACGACGAATATGTCCTGGTTTGCCGTT
GGCTATAAGAATGTTATATCTAATGTTGGGTTCACTTATTAATTCCTTTG
ATTGGAAATTTGAAGATGGAATTACTCAACATAACATGGACATGGAAGAG
AAGTTTGGTCTCACCTTAAATAAGGCTCAGCCACTTCATGCAATCCCTAT
TGCCATTTAAGTAGTAACATATAGTTTAGTCTTTTATGTACCACAATGAC
GTGAATAAGGTTATAGCCAAGGGCTTTGTCCCTGTTTGTTATGTAAATCA
TCATAGTTGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAATAG
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