EY688442
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY688442 vs. ExPASy Swiss-Prot
Match: RBS2_ACECL (Ribulose bisphosphate carboxylase small chain 2 (Fragment) OS=Acetabularia cliftonii GN=RBCS-2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12 Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 3 Query: 369 SPGYYDGRYWTMWKLPMYGCTDATQVLNEVGEVQKEYPHSFVRIIRFDNERQGNASISLLPSHQP 563 S Y D RYWTMWKLPM+GCTD +QVL+E+ K +P +++R++ FD RQ IS H+P Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQ--VQISGFLVHRP 72
BLAST of EY688442 vs. ExPASy Swiss-Prot
Match: RBS_RHOCA (Ribulose bisphosphate carboxylase small chain OS=Rhodobacter capsulatus GN=cbbS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.037e-11 Identity = 33/104 (31.73%), Postives = 54/104 (51.92%), Query Frame = 3 Query: 225 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLNEVGEVQKEYPHSFVRIIRFDNERQGNAS 536 +K T SYLPP+ + + +++ +++++GW P +E H P + YW MWKLPM+G TD +L E+ + P VR+I +DN Q + Sbjct: 17 RKMGTFSYLPPMGEAEIRRQVEWIVKNGWNPGIE------------HTEPDFAAQIYWYMWKLPMFGETDVDAILAELKACHEANPGHHVRLIGYDNFTQSQGA 108
BLAST of EY688442 vs. ExPASy Swiss-Prot
Match: RBS_NITVU (Ribulose bisphosphate carboxylase small chain OS=Nitrobacter vulgaris GN=cbbS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11 Identity = 38/109 (34.86%), Postives = 55/109 (50.46%), Query Frame = 3 Query: 198 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLNEVGEVQKEYPHSFVRIIRFDNERQ 524 M V LKK+ET SYLP ++ E + ++I + I GW P +E EKG + YW MWKLP++G V+ E+ +E+P VR + +DN Q Sbjct: 1 MAVQAYRSLKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVE-HTEKGTPAK----------ASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQ 98
BLAST of EY688442 vs. ExPASy Swiss-Prot
Match: RBS1_THIFE (Ribulose bisphosphate carboxylase small chain 1 OS=Thiobacillus ferrooxidans GN=cbbS1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11 Identity = 36/103 (34.95%), Postives = 50/103 (48.54%), Query Frame = 3 Query: 228 KFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLNEVGEVQKEYPHSFVRIIRFDNERQGNAS 536 K+ET SYLP + E + ++I YLI GW P +E H P YW MWKLPM+G V+ E+ + +P VR++ +DN Q S Sbjct: 12 KYETFSYLPAMGPEKMRRQIAYLINQGWNPGIE------------HVEPERASTYYWYMWKLPMFGEQSVDTVIMELEACHRAHPGHHVRLVGYDNYSQSQGS 102 The following BLAST results are available for this feature:
BLAST of EY688442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY688442 ID=EY688442; Name=EY688442; organism=Citrus sinensis; type=EST; length=845bpback to top |