EY688432

Overview
NameEY688432
Unique NameEY688432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 3.614e-68
Identity = 123/224 (54.91%), Postives = 152/224 (67.86%), Query Frame = 2
Query:   92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSPN 763
            MRE ISI++GQAG Q+ N+CWELYCLEHGIQPDG +  ++     D  F+TFFSETG GKHVPRA++ DLEP V+DEVRTG YR LFHPE +I+GKEDA+NN+ARGHYT+GKE++D  LD+IR++ADNC GLQGFLVF++                  VDYGKKSKL F VYP          P N +L+TH+ +E   C  F       YD CR +L +  PN
Sbjct:    1 MREVISINVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAQDPDQGFSTFFSETGNGKHVPRAIYCDLEPNVVDEVRTGAYRNLFHPEMMITGKEDASNNYARGHYTVGKELIDGVLDKIRRVADNCAGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYNSILTTHTTLEHSDCS-FMVDNEAIYDICRRNLGLERPN 223          
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.373e-67
Identity = 121/224 (54.02%), Postives = 152/224 (67.86%), Query Frame = 2
Query:   92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSPN 763
            MRE IS+++GQAG Q+ N+CWELYCLEHGIQPDG +  ++     DD F+TFFSETG GK+VPR ++ DLEP V+DEVRTGTYR LFHPE +I+GKEDA+NN+ARGHYT+GKE++D  LD++R +ADNC+GLQGFLVF++                  VDYGKK KL F VYP          P N +L+TH+ +E   C  F       YD CR +L I  PN
Sbjct:    1 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAAEDDDGFSTFFSETGNGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPELMITGKEDASNNYARGHYTVGKELIDQVLDKVRHVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKCKLEFCVYPAPQVATSVVEPYNSILTTHTTLEHSDCS-FMVDNEAIYDICRRNLGIERPN 223          
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 1.373e-67
Identity = 125/224 (55.80%), Postives = 155/224 (69.20%), Query Frame = 2
Query:   92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSPN 763
            MRE ISIH+GQAG Q+GNACWELYCLEHGIQP+G M  +      D  F+TFFSETG GK+VPR+++VDLEP VID+VRTG YR LFHPEQLI+GKEDA+NN+ARGHYT+GKE+VD   D+IR++ADNC+GLQGFLVF++                  ++Y KKSKL F+VYP          P N VL+TH+ ++   C  F       YD CR +LDI  P+
Sbjct:    1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATLDLADC-TFMVDNESCYDICRRNLDIERPS 223          
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.794e-67
Identity = 121/224 (54.02%), Postives = 152/224 (67.86%), Query Frame = 2
Query:   92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSPN 763
            MRE IS+++GQAG Q+ N+CWELYCLEHGIQPDG +  ++     D  F+TFFSETG GK+VPR ++ DLEP VIDEVRTG YR LFHPE +ISGKEDA+NN+ARGHYT+GKE++D  LD++R++ADNC+GLQGFLVF++                  VDYGKKSKL F VYP          P N +L+TH+ +E   C  F       YD CR +L +  PN
Sbjct:    1 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYNSILTTHTTLEHADCS-FMVDNEAIYDICRRNLGLERPN 223          
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.059e-67
Identity = 119/224 (53.12%), Postives = 154/224 (68.75%), Query Frame = 2
Query:   92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSPN 763
            MRE +S+++GQAG Q+ N+CWELYCLEHGIQPDG +  ++     D  FNTFFSETG GK+VPR ++ DLEP V+DEVRTG YR LFHPEQ+I+GKEDA+NN+ARGHYT+GKE++D CLD++R++ADNC+GLQGFLVF++                  VDYGKK+KL F VYP          P N +L+TH+ +E +    F       YD CR +L I  P+
Sbjct:    1 MREVVSLNVGQAGGQIANSCWELYCLEHGIQPDGYLTEERKAADPDQGFNTFFSETGQGKYVPRTIYCDLEPNVVDEVRTGPYRALFHPEQMITGKEDASNNYARGHYTVGKEMIDQCLDKVRRVADNCSGLQGFLVFHSFGGGQGSGFGALLMERLSVDYGKKTKLEFCVYPAPQNATSVVEPYNSILTTHTTLE-HSDVQFMVDNEAIYDICRRNLGIERPS 223          
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 5.218e-67
Identity = 120/224 (53.57%), Postives = 153/224 (68.30%), Query Frame = 2
Query:   92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSPN 763
            MRE IS+++GQAG Q+ N+CWELYCLEHGIQPDG +  ++     D  F+TFFSETG GK+VPR ++ DLEP V+DEVRTGTYR LFHPE LI+GKEDA+NN+ARGHYT+GKE++D  LD++R++AD+C+GLQGFLVF++                  VDYGKKSKL F VYP          P N +L+TH+ +E   C  F       YD CR +L I  P+
Sbjct:    1 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKKEDPDHGFSTFFSETGQGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPENLITGKEDASNNYARGHYTVGKEMIDQVLDKVRRMADSCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQNATSVVEPYNSILTTHTTLEHSDCS-FMVDNEAIYDICRRNLGIERPS 223          
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 7.535e-66
Identity = 119/224 (53.12%), Postives = 151/224 (67.41%), Query Frame = 2
Query:   92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSPN 763
            MRE IS+++GQAG Q+ N+CWELYCLEHGIQPDG +  ++     D  F+TFFSETG GK+VPR ++ DLEP VIDEVRTG YR LFHPE +ISGKEDA+NN+ARGHYT+GKE++D  LD++R++ADNC+GLQGFLVF++                  VDYGKKSKL F VYP          P +  L+T++ +E   C  F       YD CR +L +  PN
Sbjct:    1 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYHNFLTTNTTLEQADCS-FMVDNEAIYDICRRNLGLERPN 223          
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.679e-65
Identity = 119/223 (53.36%), Postives = 154/223 (69.06%), Query Frame = 2
Query:   92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSP 760
            MRE +SIH+GQAG+Q+GNACWELY +EHG+ PDG++ SD +    DD F+TFFSET +GK+VPR+++VDLEP VIDEVR G YR LFHPE +I+GKEDAA+N+ARGHYTIGKE +D+ +D++R+L DNC GLQGF VF++                   DYGKKSKL F+VYP  +       P N VL+TH+ +E   C  F       YD C+ +L+I  P
Sbjct:    1 MREVVSIHVGQAGVQIGNACWELYTIEHGLSPDGRL-SDDSPSKHDDGFSTFFSETSSGKYVPRSLYVDLEPNVIDEVRNGPYRSLFHPETMITGKEDAASNYARGHYTIGKEQIDVVMDKVRRLVDNCNGLQGFFVFHSFGGGTGSGFGALILERLSTDYGKKSKLEFSVYPAPTLASSVVEPYNSVLTTHTTLEHSDCS-FMVDNEAIYDICKKNLNIAQP 221          
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.192e-65
Identity = 124/225 (55.11%), Postives = 154/225 (68.44%), Query Frame = 2
Query:   92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD-KTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSPN 763
            MRE ISI++GQAG Q+GNACWELY  EHGI+PDG +        GG++ F+TFFSETG+GK+VPRA++VDLEP VIDEVRTG Y+ LFHPEQLI+GKEDAANN+ARGHYT+G+EI+D  LDR+R+++D C GLQGFL  +++                 +DYGKKSKL F VYP          P N VL+TH+ +E   C  F       YD CR +LDI  PN
Sbjct:    1 MREVISINVGQAGCQIGNACWELYSQEHGIRPDGYLQEGLDRPKGGEEGFSTFFSETGSGKYVPRALYVDLEPNVIDEVRTGVYKDLFHPEQLIAGKEDAANNYARGHYTVGREILDDILDRVRRMSDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSLDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADC-TFMVDNEAIYDMCRRNLDIARPN 224          
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.740e-65
Identity = 130/228 (57.02%), Postives = 156/228 (68.42%), Query Frame = 2
Query:   95 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFN----TFFSETGAGKHV-PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDY-GKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSP 760
            RE ISIHIGQAG+QVGN+CWELYCLEHGI+ DG +P+D+      +  N    TFFSE+  GK V PRA+F+DLEPTVIDE+RTG Y+ LFHPEQLI+GKEDAANN+ARGHYT+GKE++D+C+DRIR+LAD C GLQGFLVF++V                 +DY GKKSKL F VYP          P N VLSTHSL+E      F       Y+ C+ SLDI  P
Sbjct:    3 REIISIHIGQAGVQVGNSCWELYCLEHGIERDGSIPADRKQSSDVNNLNKDLGTFFSESTNGKKVVPRAIFLDLEPTVIDEIRTGDYKNLFHPEQLITGKEDAANNYARGHYTVGKELIDVCVDRIRRLADQCDGLQGFLVFHSVGGGTGSGFGSLLLQKLALDYGGKKSKLDFCVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVS-FMLDNEAIYNICKNSLDIEKP 229          
The following BLAST results are available for this feature:
BLAST of EY688432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 410
Match NameE-valueIdentityDescription
TBA_GIBZE3.614e-6854.91Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=... [more]
TBA_MYCGR1.373e-6754.02Tubulin alpha chain OS=Mycosphaerella graminicola ... [more]
TBA2_SCHPO1.373e-6755.80Tubulin alpha-2 chain OS=Schizosaccharomyces pombe... [more]
TBA2_NEUCR1.794e-6754.02Tubulin alpha-B chain OS=Neurospora crassa GN=tba-... [more]
TBA_AJECA3.059e-6753.13Tubulin alpha chain (Fragment) OS=Ajellomyces caps... [more]
TBA1_EMENI5.218e-6753.57Tubulin alpha-1 chain OS=Emericella nidulans GN=tu... [more]
TBA_SORMA7.535e-6653.13Tubulin alpha chain OS=Sordaria macrospora GN=TUBA... [more]
TBAA_SCHCO1.679e-6553.36Tubulin alpha-1A chain OS=Schizophyllum commune GN... [more]
TBA_CANAL2.192e-6555.11Tubulin alpha chain OS=Candida albicans GN=TUB1 PE... [more]
TBA_DICDI3.740e-6557.02Tubulin alpha chain OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-070-F10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688432 ID=EY688432; Name=EY688432; organism=Citrus sinensis; type=EST; length=860bp
AAGAGGCGTCTTATAAACCCCTTCGTTTAGATTCAATTACTTCTTCTTTT
GGCTGTGTACCTCGTCGTTTTTCTTCTCTTAATCTGCGAAAATGAGAGAG
TGCATTTCAATCCATATCGGTCAGGCCGGTATCCAGGTCGGAAATGCCTG
CTGGGAACTCTACTGCCTCGAGCACGGCATTCAGCCTGATGGCCAAATGC
CAAGTGATAAGACAGTCGGAGGTGGCGACGATGCTTTCAACACCTTTTTC
AGTGAAACAGGTGCAGGGAAGCACGTGCCTCGTGCTGTCTTTGTTGATCT
TGAGCCCACTGTCATTGATGAAGTGAGGACCGGAACTTACCGCCAGCTCT
TCCACCCTGAGCAGCTCATCAGTGGCAAGGAAGACGCTGCCAACAACTTC
GCCCGTGGCCACTATACCATTGGTAAGGAGATTGTTGATCTCTGCCTTGA
CCGCATCAGGAAGCTGGCTGATAACTGCACTGGTCTCCAGGGATTCCTTG
TTTTCAATGCTGTTGGTGGAGGAACTGGCTCTGGTCTTGGGTCTCTTCTT
CTGGAGAGGTTGTCTGTTGACTATGGAAAGAAGTCAAAGTTGGGCTTCAC
TGTCTACCCCATCTCCTCAGGTCTCCACATCTGTTGTTGACCCTTAAACA
GGGTCCTCTCAACCCACTCCCTGGTGGAAGCATACGGATGTGGGCTGTTC
TTCTCCCAAATGAGGCCATTTTATGACACCTGCCGGCCCTCCCTTGACAT
TGGAAGCCCCAACCAAAACTACCCTCACTAAACTTGGTCCTCAGGTAACT
TCTTCCCAGCACGCCCGCACGCAGAGCTGGGAAGGGGATCTCAATGGAGA
GGGGCACATA
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