EY688432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBG_RETFI (Tubulin gamma chain OS=Reticulomyxa filosa PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15 Identity = 59/197 (29.95%), Postives = 95/197 (48.22%), Query Frame = 2 Query: 95 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYP-ISSGLHICC*PLNRVLSTHSLV 676 RE I++ +GQ G Q+G W EHGI PDG + T G D + FF + ++PRA+ +DLEP VI+ ++ ++ L++PE + + A NN+A G YT E + +D I + DN L+GF++ +++ Y KK ++V+P S + P N VL+ L+ Sbjct: 3 REIITLQVGQCGNQIGTEFWGRLIAEHGIGPDGIVKEFATEG--TDRKDVFFYQADDQHYIPRALLIDLEPRVINSLQESEFKNLWNPENVYIDSQGGGAGNNWAVG-YTHATEKYEHIMDMIDR-EDNSDSLEGFVLTHSIAGGTGSGFGSHMLEQLTDRYPKKIIQTYSVFPNDSERSSVVVHPYNSVLALKRLI 195
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBG_CANGA (Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.054e-15 Identity = 64/230 (27.83%), Postives = 98/230 (42.61%), Query Frame = 2 Query: 98 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP-SDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSPNQNYPH 778 E I+I +GQ G VG W EHGI DG +D +D N FF + ++VPRA+ +DLEP + +V++ ++ LF+P E A N+++ G Y G + D +D I + D+ +GF + ++V Y K ++V+P S + P N VL+ L E + F T R D PN +Y H Sbjct: 4 EIITIQVGQCGNHVGKYFWNQLLKEHGIDKDGYSKYNDDLTHIREDDTNPFFKQITNNRYVPRAIMIDLEPAAVTDVQS-SFNDLFNPRNTWVSSEGLGAGNSWSTG-YDRGVQNQDRIMDIIDRELDSTDNFEGFQLLHSVAGGTGSGLGSSLLEALTDRYSKSFITTYSVFP-SKQSEVVVGPYNTVLTLRRLCEDADASIIFDNNALLNLTARTFRD---PNTSYEH 227
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBG_YEAST (Tubulin gamma chain OS=Saccharomyces cerevisiae GN=TUB4 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.125e-14 Identity = 61/198 (30.81%), Postives = 86/198 (43.43%), Query Frame = 2 Query: 98 ECISIHIGQAGIQVGNACWELYCLEHGIQPDG--QMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQ--LISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVE 679 E I++ GQ G VG W EH I DG Q+P T DD FF E K PRA+ +D EP+VI +V T+R F P + S A N++A G Y IG D L++I K D+ +GF + ++V Y KK ++V+P S + N +L+ L+E Sbjct: 4 EIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQLPDSSTER--DDDTKPFFRENSRNKFTPRAIMMDSEPSVIADVE-NTFRGFFDPRNTWVASDGASAGNSWANG-YDIGTRNQDDILNKIDKEIDSTDNFEGFQLLHSVAGGTGSGLGSNLLEALCDRYPKKILTTYSVFPARSS-EVVVQSYNTILALRRLIE 196
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBG_ASHGO (Tubulin gamma chain OS=Ashbya gossypii GN=TUB4 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.544e-13 Identity = 62/206 (30.10%), Postives = 90/206 (43.69%), Query Frame = 2 Query: 98 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQM--PSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFF 703 E ISI +GQ G QVG W EHGI DGQ P D V DD N FF + + PRA+ DLEP+ I +V+ + F+ + KE+ A N ++ G Y G E D ++ I K D +GF + ++V Y KK ++V+P S + P N +L+ L++ + F Sbjct: 4 EIISIQVGQCGNQVGKQFWGQLAREHGIGVDGQSLHPEDANVVREDDT-NVFFRQNDHNRFTPRALLYDLEPSAIGDVQ-NCFPGFFNERNVWISKEELGAGNTWSIG-YDYGLEKQDEFMNMIDKEIDATGNFEGFQLIHSVAGGTGSGLGSNLLEALSDRYHKKIVSTYSVFP-SRESEVVVQPYNTILTLRRLIDNSDASVLF 205
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBB_HALDI (Tubulin beta chain (Fragment) OS=Haliotis discus PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.544e-13 Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = 2 Query: 323 VRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSP 760 VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C LQGF + +++ +Y + F+V P P N LS H LVE + YD C +L + +P Sbjct: 2 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTD-ETYCIDNEALYDICFRTLKLTTP 146
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBG_CAEEL (Tubulin gamma chain OS=Caenorhabditis elegans GN=tbg-1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12 Identity = 56/196 (28.57%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 104 ISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVID-EVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPIS-SGLHICC*PLNRVLSTHSLVE 679 +++H+GQ G Q+ A W+ EHGI GQ + + +D + F + +VPRAV VDLEP VI+ +++ + LF+ + + A NN+A G Y G+E+ + +D I + A+N L G L ++V + KK ++V+ S + + P N VLS L+E Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIE 199
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12 Identity = 55/216 (25.46%), Postives = 93/216 (43.06%), Query Frame = 2 Query: 92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSET-----GAGKHVP---------RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGL 697 M + + + +GQ G Q+G W+L EH + G D+A ++FF G G + RAV +D+E V++E+ G R +F +QLI+ + NN+A GH G D L++ RK A++C LQ F + +++ ++ + + ++YP S + P N +L+ L E C L Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRVVGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYP-SGEDDVITSPYNSILAMKELNEHADCVL 207
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12 Identity = 57/216 (26.39%), Postives = 93/216 (43.06%), Query Frame = 2 Query: 92 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSET-----GAGKHVP---------RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGL 697 M + + + +GQ G Q+G W+L EH + G DDA ++FF G G + RAV +D+E V++E+ G R +F +QLI+ + NN+A GH G + L+++RK A+ C LQ F + +++ ++ + + VYP SS + P N +L+ L E C L Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDDAISSFFRNVDTRAVGDGGSISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYREQILEKLRKSAEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYP-SSEDDVITSPYNSMLAMKELNEHADCVL 207
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: TBA8_CHICK (Tubulin alpha-8 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11 Identity = 38/97 (39.18%), Postives = 47/97 (48.45%), Query Frame = 2 Query: 470 DNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSP 760 D CTGLQGFL+F++ VDYGKKSKL F +YP P N +L+TH+ +E C F YD CR +LDI P Sbjct: 2 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEQSDCA-FMVDNEAIYDICRRNLDIERP 97
BLAST of EY688432 vs. ExPASy Swiss-Prot
Match: YI016_HUMAN (Putative tubulin beta chain-like protein ENSP00000290377 OS=Homo sapiens PE=5 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11 Identity = 42/149 (28.19%), Postives = 68/149 (45.64%), Query Frame = 2 Query: 314 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPISSGLHICC*PLNRVLSTHSLVEAYGCGLFFSQMRPFYDTCRPSLDIGSP 760 +D VR+G + Q+ P+ I G+ A NN+A+G YT G E+ + +D +RK A++C LQGF + +++ +Y + F++ P P N LS H L+E F YD C +L + +P Sbjct: 1 MDSVRSGPFGQVLRPDNFIFGQCGAGNNWAKGRYTEGAELTESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMVTLLISKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIE-NADETFCIDNEALYDICSKTLKLPTP 148 The following BLAST results are available for this feature:
BLAST of EY688432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 410
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY688432 ID=EY688432; Name=EY688432; organism=Citrus sinensis; type=EST; length=860bpback to top |