EY688405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: LIS1B_DANRE (Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11 Identity = 54/222 (24.32%), Postives = 95/222 (42.79%), Query Frame = 3 Query: 3 ASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD--------------------GSLCASGGKDGVILLWDLAEGKRLYSL-DAGAVIHALCFSP-NRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVW 602 ASRD+T+K+W Y ++ H EWV VR PN + S S D+TV+VW ++ + +A L H V ++ +P+ G SG +D I +WD++ G L +L + + F P R+ + A +++++IWD ++K ++ L + TSL++ + +G D ++VW Sbjct: 210 ASRDKTMKMWEVA--TGYCVKTFTGHREWVRMVR--PNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSA--------------------HEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.994e-11 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 3 Query: 6 SRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYWLCAAT-EQSIKIWD 419 S DRT+K+W+T+ G +T+Q HT V C+ + + L V+ S D T++VW++ + + ATL GH V V DG+ SGG D + +W+ G+ + +L +++L F R +C+ + + SI++WD Sbjct: 315 STDRTVKVWSTVDGSLLHTLQ---GHTSTVRCMAMAGSIL----VTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WDR61_DANRE (WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 55/178 (30.90%), Postives = 80/178 (44.94%), Query Frame = 3 Query: 87 WVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRA--TLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV-IHALCFSPNRYWLCAATE-QSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 608 W + S TIV+ S D VKVW S+ KL TL GH V +V +S +G++ AS D I LWDL GK++ S+DAG V + FSP+ ++ + + I+ +ES L + S+ +S DG L SG DG+I ++ I Sbjct: 20 WTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDT--------------------RGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 50/213 (23.47%), Postives = 98/213 (46.01%), Query Frame = 3 Query: 3 ASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGRY*KLLE 632 AS D+TIK+W G+ + T++ H E +S + +S ++ I SAS D+T+K+W++ + K+ TL GH YV V+ +P +L SG D + +WD+ G+ ++ S + V + + + +++IWD + ++ + + + + +S +G + +G D +R+W K L+ Sbjct: 64 ASADKTIKIWGAYDGKFERTLE---GHKEGISDIAWSQDS--KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTE-------------------DGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLK 252
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: SPG16_MOUSE (Sperm-associated antigen 16 protein OS=Mus musculus GN=Spag16 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 47/156 (30.13%), Postives = 79/156 (50.64%), Query Frame = 3 Query: 3 ASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA-VIHALCFSPNRYWLCAATEQSI-KIWDLESKSIVEDLKVDL 461 +S D TIKLW+ GEC T+ EG H W SC S + SAS D T K+W++++ + R TL GHT VN++ P ++ + D + +WD GK SL ++ F+P + + + + + K+WD + ++ + +D+ Sbjct: 420 SSGDSTIKLWDLNKGECTLTL-EGHNHAVW-SCTWHSCGDF---VASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDF--RKLIPIVSIDV 568
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: SNR40_PONAB (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii GN=SNRNP40 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 53/205 (25.85%), Postives = 85/205 (41.46%), Query Frame = 3 Query: 3 ASRDRTIKLWNTLGEC-KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG-SLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFS-PNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 608 A DR I LWN G+C Y +G + + + NT + SAS D+TV VW+ + L GHT +VN+ + G L +G DG + LWD+ + + + + A+ F+ + + + IK+WDL + ++ T L+ S +GS L S D +RVW + Sbjct: 84 AGFDRLILLWNVYGDCGNYATLKGYSG----AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS--------------------VTGLSLSSEGSYLLSNAMDNTVRVWDV 264
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: PRP4_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 45/145 (31.03%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 3 ASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-AVIHALCFSPNRYWLCAATEQS-IKIWDLESK 431 AS DRT KLW T G +Q + H + ++ V F P+ + + S+D+T ++W+++ GH+ V +A DG+L AS G D + +WDL G+ + + ++ FSPN Y L + E + +IWDL + Sbjct: 316 ASADRTAKLWKTDGTL---LQTFEGHLDRLARVAFHPSGKY--LGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMR 455
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = 3 Query: 78 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA-VIHALCFSPNRYWLCAAT-EQSIKIWDLESKSIVEDL 449 HT V VRF N + IV+ S ++++W+L K+ TL GH V+++ P G ASG D I LWD+ ++ + L FSP+ WL +A+ + S+K+WDL + ++ +L Sbjct: 62 HTTPVESVRF--NNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAEL 185 HSP 2 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 45/151 (29.80%), Postives = 76/151 (50.33%), Query Frame = 3 Query: 6 SRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV-IHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKV 455 S D IKLW+ K + HT+ V C+RFSP+ + SAS D +VK+W+L+ K+ A L+ H G VN + P+ L ASG D + WDL + + + + + + A+ FS + + + S++++ E + + V Sbjct: 124 SLDTNIKLWDV--RRKGCVFRYKGHTQAVRCLRFSPDG--KWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDSLRVYGWEPDQCFDTVPV 270
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: KTNB1_STRPU (Katanin p80 WD40-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 44/149 (29.53%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 12 DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA-VIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLK 452 D+ + LW +G+ I HT V V+F N+ + +V+ S T+K+++L K+ TL GH + + P G ASG D + LWD+ +Y+ + ++ + FSP+ WL A+E +IK+WDL + ++ K Sbjct: 38 DKKVNLW-AVGKQNCIISLS-GHTSPVDSVKF--NSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFK 182 HSP 2 Score: 68.9366 bits (167), Expect = 3.910e-11 Identity = 43/142 (30.28%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 6 SRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA-VIHALCFSPNRYWLCAATEQSIKIWDLE 425 S D +KLW+ + C YT + H++ V+ ++FSP+ +V+AS D T+K+W+L+ KL HTG V + P+ L ASG D + WDL + + S GA + ++ F P+ +L +++ + + E Sbjct: 120 STDTNVKLWDVRRKGCIYTYK---GHSDQVNMIKFSPDG--KWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSISFHPDGSYLFCSSQDMLHAFGWE 256
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.107e-11 Identity = 45/150 (30.00%), Postives = 70/150 (46.67%), Query Frame = 3 Query: 6 SRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDL 449 S D TI+LW+ L G + W VRF+P+ VS S+D+T ++W + + GH V+ V P+ + A+G D + LWD G+ RL + G+V + RY + + +I IWDL + S+V L Sbjct: 469 SEDSTIRLWSLLTWSCVVTYRGHVYPVWD--VRFAPHGYY--FVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTL 614 The following BLAST results are available for this feature:
BLAST of EY688405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >EY688405 ID=EY688405; Name=EY688405; organism=Citrus sinensis; type=EST; length=838bpback to top |