EY688405

Overview
NameEY688405
Unique NameEY688405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.994e-16
Identity = 57/206 (27.67%), Postives = 98/206 (47.57%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGST-LFSGYTDGVIRVWGI 608
            AS D+T+K++  +        +G  H  +V C  F+P +    +VS S+D +V++W++       TL  H+  V+ V+ + DGSL ASG  DG++ +WD A G+ + +L  D    +  + FSPN +Y L +  + ++K+WD      ++                         + YC   N+SV G   + SG  D  I +W +
Sbjct:  147 ASDDKTLKIFEIVTSRMTKTLKG--HNNYVFCCNFNPQS--SLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQ------------------YTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330          
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: TG125_CAEBR (WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae GN=tag-125 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.994e-16
Identity = 59/206 (28.64%), Postives = 98/206 (47.57%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGST-LFSGYTDGVIRVWGI 608
            AS D+T+K++           +G  HT +V C  F+P +    +VS S+D +V++W++       TL  H+  V+ V+ + DGSL  SG  DG++ +WD A G+ + +L  D    +  + FSPN +Y L +  + ++K+WD      ++  +                      N YC   N+SV G   + SG  D  I VW +
Sbjct:  139 ASDDKTLKIYEVPTVKMAKTLKG--HTNYVFCCNFNPQS--SLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQ------------------GHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNL 322          
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: POF1_SCHPO (F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe GN=pof1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.534e-15
Identity = 67/203 (33.00%), Postives = 93/203 (45.81%), Query Frame = 3
Query:    6 SRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-AVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSV--DGSTLFSGYTDGVIRVW 602
            S D+TI++WN    EC  +I  G  HT+ V C+ F    L    VS S D TVK+W+ S  K R TL GHTG VN+V +  D  L  SG  D  I +W L     L++  A    + +L  + +R + C + + +IK WD+E K  V  L   +                           W +  D   L SG  DGV++VW
Sbjct:  330 SMDKTIRIWNYRTSEC-ISILHG--HTDSVLCLTFDSTLL----VSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSC-SLDGTIKQWDIEKKKCVHTLFGHIEGV------------------------WEIAADHLRLISGAHDGVVKVW 499          
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WDR48_DROPS (WD repeat-containing protein 48 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21511 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.944e-15
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 614
            A RD  I++WNT  E   KY IQ  + H +WV+ +    N     ++SAS D TVKVWN       +TL  H  YV  +A + D    AS G D  I LWD+     L + +              I++L  +P+    +  +TE  ++IWD   ++ +  +K+                     N+ C  L  S DG+ + SG +DG I+VW +G+
Sbjct:   46 AGRDAIIRVWNTRSESSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239          
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WDR48_DROPE (WD repeat-containing protein 48 homolog OS=Drosophila persimilis GN=GL16745 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.944e-15
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 614
            A RD  I++WNT  E   KY IQ  + H +WV+ +    N     ++SAS D TVKVWN       +TL  H  YV  +A + D    AS G D  I LWD+     L + +              I++L  +P+    +  +TE  ++IWD   ++ +  +K+                     N+ C  L  S DG+ + SG +DG I+VW +G+
Sbjct:   46 AGRDAIIRVWNTRSESSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239          
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.944e-15
Identity = 49/154 (31.82%), Postives = 85/154 (55.19%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLK 452
            AS D++IK+W+   +   Y++     HT WV C +FSP+     IVS S D+T+K+W+ +N +     +   G+ N V  +P G+  AS G D  + +WD+   K L  Y + +G V + + F P+  Y + A+++ ++KI DL    ++  L+
Sbjct:  120 ASEDKSIKVWSMYRQRFLYSLYR---HTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267          

HSP 2 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 45/153 (29.41%), Postives = 83/153 (54.25%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL-DAGAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLKV 455
            ASRDRT++LW  + + +    E  AHT  V  V FS +     + +AS D+++KVW++   +   +L  HT +V     SPDG L  S  +D  I +WD    + + +  D+    + + F+P+   + +A ++Q++K+WD+    +++  +V
Sbjct:   78 ASRDRTVRLW--IPDKRGKFSEFKAHTAPVRSVDFSADG--QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 226          
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14
Identity = 49/154 (31.82%), Postives = 85/154 (55.19%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAVIHALCFSP-NRYWLCAATEQSIKIWDLESKSIVEDLK 452
            AS D++IK+W+   +   Y++     HT WV C +FSP+     IVS S D+T+K+W+ +N +     +   G+ N V  +P G+  AS G D  + +WD+   K L  Y + +G V + + F P + Y + A+++ ++KI DL    ++  L+
Sbjct:  120 ASEDKSIKVWSMYRQRFLYSLYR---HTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ 267          

HSP 2 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 45/153 (29.41%), Postives = 83/153 (54.25%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL-DAGAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLKV 455
            ASRDRT++LW  + + +    E  AHT  V  V FS +     + +AS D+++KVW++   +   +L  HT +V     SPDG L  S  +D  I +WD    + + +  D+    + + F+P+   + +A ++Q++K+WD+    +++  +V
Sbjct:   78 ASRDRTVRLW--IPDKRGKFSEFKAHTAPVRSVDFSADG--QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQV 226          
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WDR48_DROMO (WD repeat-containing protein 48 homolog OS=Drosophila mojavensis GN=GI19644 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.696e-14
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 614
            A RD  I++WNT  E   KY IQ  + H +WV+ +    N     ++SAS D TVKVWN       +TL  H  YV  +A + D    AS G D  I LWD+     L + +              I++L  +P+    +  +TE  ++IWD   ++ +  +K+                     N+ C  L  S DG+ + SG +DG I+VW +G+
Sbjct:   46 AGRDAIIRVWNTRTEANEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239          
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WDR48_DROAN (WD repeat-containing protein 48 homolog OS=Drosophila ananassae GN=GF12420 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.696e-14
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 614
            A RD  I++WNT  E   KY IQ  + H +WV+ +    N     ++SAS D TVKVWN       +TL  H  YV  +A + D    AS G D  I LWD+     L + +              I++L  +P+    +  +TE  ++IWD   ++ +  +K+                     N+ C  L  S DG+ + SG +DG I+VW +G+
Sbjct:   46 AGRDAIIRVWNTRTESNEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239          
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WD51A_BOVIN (WD repeat-containing protein 51A OS=Bos taurus GN=WDR51A PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.696e-14
Identity = 51/143 (35.66%), Postives = 82/143 (57.34%), Query Frame = 3
Query:    3 ASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDL 422
            AS D+T+K+W+T  + K+       H  WV C +FSP+     IVSAS D+TVK+W+ ++ +   +   H G+V  V   P G+  A+ G D  + +WD+   + L  Y L + AV +AL F P+  Y + A+++ ++KI DL
Sbjct:  121 ASDDKTVKVWSTHRQ-KFLFSLSQ-HINWVRCAKFSPD--GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV-NALSFHPSGNYLVTASSDSTLKILDL 258          

HSP 2 Score: 70.4774 bits (171), Expect = 1.344e-11
Identity = 46/150 (30.67%), Postives = 76/150 (50.67%), Query Frame = 3
Query:    6 SRDRTIKLW--NTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYS-LDAGAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVE 443
            SRD+T+++W  N  GE         AHT  V  V F  +    + V+AS D+TVKVW+    K   +L+ H  +V     SPDG L  S   D  + LWD    + ++S  + G  +  + F P+   + AA  + ++K+WD+ +  +++
Sbjct:   80 SRDKTVRIWVPNVKGESTVF----RAHTATVRSVHFCSDG--QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223          
The following BLAST results are available for this feature:
BLAST of EY688405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TG125_CAEEL8.994e-1627.67WD repeat-containing protein tag-125 OS=Caenorhabd... [more]
TG125_CAEBR8.994e-1628.64WD repeat-containing protein tag-125 OS=Caenorhabd... [more]
POF1_SCHPO1.534e-1533.00F-box/WD repeat-containing protein pof1 OS=Schizos... [more]
WDR48_DROPS9.944e-1529.95WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROPE9.944e-1529.95WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WD51B_HUMAN9.944e-1531.82WD repeat-containing protein 51B OS=Homo sapiens G... [more]
WD51B_PONAB1.299e-1431.82WD repeat-containing protein 51B OS=Pongo abelii G... [more]
WDR48_DROMO1.696e-1429.95WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROAN1.696e-1429.95WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WD51A_BOVIN1.696e-1435.66WD repeat-containing protein 51A OS=Bos taurus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-070-C11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688405 ID=EY688405; Name=EY688405; organism=Citrus sinensis; type=EST; length=838bp
CGGCCTCTCGTGACCGTACGATCAAGTTGTGGAACACGCTCGGCGAGTGC
AAGTACACGATTCAAGAGGGAGACGCTCACACTGAGTGGGTTTCTTGTGT
TAGGTTCAGCCCCAACACGCTTCAGCCCACTATCGTTTCCGCCTCGTGGG
ACCGTACGGTCAAAGTGTGGAATTTGAGCAACTGCAAGCTTAGGGCTACT
CTTGCCGGGCACACTGGATACGTGAACACCGTCGCAGTGTCGCCGGATGG
TTCGTTGTGTGCCAGTGGAGGGAAAGATGGTGTGATTCTGTTGTGGGATT
TGGCTGAGGGAAAAAGACTCTACTCGCTCGACGCTGGTGCTGTCATTCAC
GCGCTCTGCTTCAGTCCTAATAGGTATTGGTTGTGTGCGGCGACTGAGCA
GAGTATAAAGATCTGGGATTTGGAGAGCAAGAGCATTGTCGAGGATCTTA
AGGTTGATCTTAAGACCGAGGCCGAGAAATCTGAGGCCACCACCGCCACC
ACCACCATAAAAAAGAAGAACATTTACTGCACAAGCTTGAACTGGAGTGT
TGATGGAAGCACCTTGTTCAGTGGTTATACAGATGGTGTGATCAGAGTCT
GGGGTATTGGCCGTTATTGAAAACTGCTTGAGTAATTGCAAAATGCTGTT
CTTTTTCGATTACAAACTAGTTTCTCGACTTTGTAGGCAGTTTCAAACCT
ATTTAGAATTTAAGAATTTTGTTCAAAATGGTTTTAAGGATATTTTGTTC
TCCTTTTTTTGGAATCTAAATTGGCTTTTGAGGGCCCCGGGGGTTTGGGT
TTGGGTTTATTAATTTTAAATGGTGGAAAATTTAAAAA
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