EY688405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.418e-14 Identity = 59/204 (28.92%), Postives = 92/204 (45.10%), Query Frame = 3 Query: 6 SRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 608 S D +I+ W+ + +G A+ W + SP +L S S DRT ++W+ AGH V+ V P+ + A+G D + LW +G RL++ G V+ +L FSPN +Y A +Q +K+WDL S ++ ++L+ NI TSL +S D + S D +RVW I Sbjct: 361 SEDMSIRYWDLGSFTNTVLYQGHAYPVWD--LDISPYSLY--FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL-SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR------------------GHTDNI--TSLTFSPDSGLIASASMDNSVRVWDI 539 HSP 2 Score: 77.0258 bits (188), Expect = 1.436e-13 Identity = 49/144 (34.03%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 6 SRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV--IHALCFSPNRYWLCAAT-EQSIKIWDLES 428 S DRT +LW+ + Y ++ H V CV+F PN+ + + S D+TV++W+ GH G V ++A SP+G AS G+D + LWDLA G LY G I +L FSP+ + +A+ + S+++WD+ + Sbjct: 403 SHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHPNSNY--LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG-TLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRN 541
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: GBB3_MOUSE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Mus musculus GN=Gnb3 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.418e-14 Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = 3 Query: 63 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 602 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + + +I C TS+ +S+ G LF+GY D VW Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQE--------------------SIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: Y1491_SYNY3 (Uncharacterized WD repeat-containing protein sll1491 OS=Synechocystis sp. (strain PCC 6803) GN=sll1491 PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.099e-13 Identity = 57/202 (28.22%), Postives = 95/202 (47.03%), Query Frame = 3 Query: 12 DRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV-IHALCFSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 608 DRTI++W G T+ + T + V F+P+ Q + DRT+K W+ + +L T G++N +AV+PDG G + W+LA+ K L+S+ ++ I+ + SPN W+ A E +I I+DL + V L+ + SL +S DG+TL+SG D +++W + Sbjct: 166 DRTIRIWERASGNLIQTLADNLGPT---TSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLV-GAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLR--------------------GHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDL 343
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: WD51B_MOUSE (WD repeat-containing protein 51B OS=Mus musculus GN=Wdr51b PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.099e-13 Identity = 53/203 (26.11%), Postives = 95/203 (46.80%), Query Frame = 3 Query: 3 ASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV-IHALCFSP-NRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVW 602 AS D++IK+W+ + Y++ HT WV C +FSP+ IVS S D+T+K+W+ +N + + G+ N V +P+G+ AS G D + +WD+ K L + ++ L F P + A+++ ++K+ DL ++ L+ ++++S DG L SG D + +W Sbjct: 120 ASEDKSIKVWSMFRQRFLYSLYR---HTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVF--------------------TVSFSKDGELLTSGGADAQVLIW 297 HSP 2 Score: 74.3294 bits (181), Expect = 9.307e-13 Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 3 ASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL-DAGAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLKV 455 ASRDRT++LW + + K E AHT V V FS + +V+AS D+++KVW++ + +L HT +V SPDG L S +D I +WD + + + D+ + + F+PN + +A ++ ++KIWD+ +++ +V Sbjct: 78 ASRDRTVRLW--VLDRKGKSSEFKAHTAPVRSVDFSADG--QLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQV 226
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.099e-13 Identity = 44/144 (30.56%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 3 ASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA--VIHALCFS-PNRYWLCAATEQSIKIWDLE 425 AS D+T +LW+ + Y ++ H V CV F PN + + S D+T ++W++S GHT V ++AV PDG ++G +DG+I +WD+ GKRL + I++L +S + + ++++WDL+ Sbjct: 585 ASHDQTARLWSC--DHIYPLRIFAGHLNDVDCVSFHPNGCY--VFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724 HSP 2 Score: 70.8626 bits (172), Expect = 1.029e-11 Identity = 54/204 (26.47%), Postives = 91/204 (44.61%), Query Frame = 3 Query: 6 SRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPNRYWLCAATEQS-IKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 608 S D+T++LW+ +G H W V FSP L +AS D+T ++W+ + AGH V+ V+ P+G +G D +WD++ G RL+ L A + ++ P+ WL +E I +WD+ + ++ ++ IY SL++S +G+ L SG D +RVW + Sbjct: 544 SEDKTVRLWSMDTHTALVSYKGHNHPVWD--VSFSP--LGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLF-LGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMR-----------------GHGKNAIY--SLSYSKEGNVLISGGADHTVRVWDL 723
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.099e-13 Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 3 Query: 6 SRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA-VIHALCFSPNRYWLCAAT-EQSIKIWDLES 428 S DRT +LW+ + Y ++ H V CV+F PN+ + + S D+TV++W+ GH G V +++ SP+G AS G+D + LWDLA G L I +L FSP+ + +A+ + S+++WD+ S Sbjct: 403 SHDRTARLWSF--DRTYPLRIYAGHLADVDCVKFHPNSNY--LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 541 HSP 2 Score: 76.2554 bits (186), Expect = 2.449e-13 Identity = 58/204 (28.43%), Postives = 90/204 (44.12%), Query Frame = 3 Query: 6 SRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 608 S D +I+ W+ + +G A+ W V SP +L S S DRT ++W+ AGH V+ V P+ + A+G D + LW +G RL++ G V+ +L FSPN +Y A +Q +K+WDL S ++ ++L+ TSL +S D + S D +RVW I Sbjct: 361 SEDMSIRYWDLGSFTNTVLYQGHAYPVWD--VDISPFSLY--FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL-SLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR--------------------GHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: GBB3_RAT (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus GN=Gnb3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.099e-13 Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = 3 Query: 63 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 602 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + + +I C TS+ +S+ G LF+GY D VW Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHE--------------------SIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: GBB3_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Homo sapiens GN=GNB3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.099e-13 Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = 3 Query: 63 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 602 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD +L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + +I C TS+ +S+ G LF+GY D VW Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQEL--------------------ICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.436e-13 Identity = 50/148 (33.78%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 12 DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-AVIHALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDL 449 D T+ LW EG H V V F P+ +VSAS+D T ++W++ GH+ + ++A PDGSL +SGG D + +WDL GK + LD I A+ +SPN Y L ++ + ++KIWDL S+ + Sbjct: 244 DNTVCLWKASQSTPLLRLEG--HLARVGRVAFHPSG--DYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTI 387
BLAST of EY688405 vs. ExPASy Swiss-Prot
Match: GBB3_CANFA (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Canis familiaris GN=GNB3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.436e-13 Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = 3 Query: 63 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 602 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + + +I C TS+ +S+ G LF+GY D +W Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDE--------------------SIICGITSVAFSLSGRLLFAGYDDFNCNIW 297 The following BLAST results are available for this feature:
BLAST of EY688405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >EY688405 ID=EY688405; Name=EY688405; organism=Citrus sinensis; type=EST; length=838bpback to top |