EY688403

Overview
NameEY688403
Unique NameEY688403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.887e-17
Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 3
Query:   39 QQPPQP-NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            ++P Q  NRC +CRK++GLTGF+CRCG ++CG HRY + H CS+++K    E+I + NP++  EK++KI
Sbjct:  140 EKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 3
Query:   57 NRCSVCRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            NRC  CRK++GL GF CRCG +FCG       H C+FD+K  GRE IAR NPL+ A K+ KI
Sbjct:   97 NRCKACRKKVGLLGFPCRCGGMFCGA------HACAFDYKAAGREAIARHNPLVVAPKINKI 152          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 3
Query:   36 QQQPPQPNRCSVCRKRIGL-TGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            Q +    N C +C K+ GL + ++CRCG  FC +HRY E HGC++D+K  GR  +  ANP++ A KL KI
Sbjct:  658 QTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNAPKLPKI 727          
BLAST of EY688403 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.670e-12
Identity = 26/57 (45.61%), Postives = 41/57 (71.93%), Query Frame = 3
Query:   72 CRKRIGLTGFKCRCGTIFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLEKI 242
            C+K++GL GF CRCG +F  +HRYPE+H C  D+K    + +A+ NP++K +KL ++
Sbjct:   69 CKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKLFRL 125          
The following BLAST results are available for this feature:
BLAST of EY688403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ZFAN6_BOVIN6.887e-1749.28AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP10_ORYSJ1.875e-1456.45Zinc finger A20 and AN1 domain-containing stress-a... [more]
ANUB1_HUMAN2.074e-1345.71AN1-type zinc finger and ubiquitin domain-containi... [more]
SAP8_ARATH6.670e-1245.61Putative zinc finger A20 and AN1 domain-containing... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-070-C09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688403 ID=EY688403; Name=EY688403; organism=Citrus sinensis; type=EST; length=895bp
AGGATGCCGACGTGGCTGTGGTCCTCGAGCACCAGCAGCAGCAGCCACCG
CAGCCGAATCGGTGTTCGGTTTGTAGGAAACGGATCGGGTTGACGGGTTT
CAAGTGCAGGTGCGGGACCATCTTCTGTGGGACCCACCGGTACCCGGAGA
AGCACGGATGCTCGTTTGATTTCAAGAAGGTTGGCCGAGAGGAGATTGCT
CGAGCTAATCCTTTGATCAAAGCCGAGAAGCTCGAGAAGATTTGATTCCC
ACCGTCCGGATCTCATTACTTTTTAGGAAATGAAGACGTCGTGTAATCAA
CGTCGTCAGGACCGTACATCCGGTCATGCCTGAGGCTTGATGGTTGATAA
ATATTCTCTCTTTTTTCTTTTTTTCTTAATTTTAATTTTTACTAACGCTA
ATTTTGGCTTCTTCTTTTTTTCTTTTTCTTTTTTTAAATGCATGTAAAAA
GTTTGGGTTAAAAAAGAAATTGGGAGGAGGTTTCATCCCTTTAAAGACAC
AAATAAAAATTTTTAAATATTTATTCGGCTACTACGAGATTATATTATAT
AATTTCAAAAAAACCAACACAAAAAGGGGGGGCCCACTTAAAAGAGATAA
AATTTAAATACGCGGGGTTGCAACGGCCTACCTCCATCAAAAGGAGCCCC
AAAATTTATTTTTGTTGGCCCCCCTTTTTCACGCCCTGGGATGGGGAAAA
AACCGACACGTCCACAAATCAACACCCTCCGCCCATTATTTTCTCTATTT
TTATTTTGGGTTAATTATTGAAGAAGGCCCTCCGGGCGTTCGCTTTTTCA
ATATATTTTCATACTTTAAACGGGGTATAGGGTTCTGCCCCCCGTCGCTT
CGGGCCGCACCCCCCCGGGGCCCCCGCCCCCGGAGCCCCCCGCCA
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