EY728372

Overview
NameEY728372
Unique NameEY728372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig819 contig Csv1_Contig819:382..1174. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_THETN (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter tengcongensis GN=mtnA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 64/248 (25.81%), Postives = 107/248 (43.15%), Query Frame = 3
Query:   63 TSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAES----YKFARLYPLDQKDMGPALRPIDFGVPI-PSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            T+++LT         + +   L   D   A   L E A K      +  K +A +  + I     IL H         G+   +  + +     K +F V   E RP   G +L A EL +  +P KL+ DS  A  + +  +D++ VGAD +  +G   N +GT+ +++VA   N P YV A +    +       +  ++  P       GV I P  ++V   A D TP + +T + T+ G++ P
Sbjct:   92 TAVNLTWAIGRMRGVLEKVKDLSVSDIYEA---LKEEANKIYFEDLETNKKMAKIGNEVIKPNAVILTHCNTGALATVGYGTALGVIREAHYSGKNIF-VYADETRPRLQGAKLTAWELVQEGIPAKLIADSVAATLIRDGKIDIILVGADRIALNGDTANKIGTFMLSVVAKVYNVPFYVVAPTSTIDFNIETGAEIVIEERSPEEVTHINGVRIAPEGIDVYNPAFDVTPHENITGIITEKGIIRP 335          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_THEPX (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter sp. (strain X514) GN=mtnA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 65/262 (24.81%), Postives = 114/262 (43.51%), Query Frame = 3
Query:   21 KMTIPLRVSQSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAES----YKFARLYPLDQKDMGPALRPIDFGVPI-PSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            K+   L V  +   T+++L        + + +   LE  D   A   L + A+       +  K +A    + I +   IL H         G+   +  + +     K +F V   E RP   G +L A EL +  +P KL+ DS  A  + +  +D++ VGAD +  +G   N +GT+ ++++A   N P YV A +    ++      +  ++  P       GV I P  +EV   A D TP + +T + T+ G++ P
Sbjct:   78 KIEEALEVIANSRPTAVNLMWAVKRMKKVIEKNKELELIDIYQA---LKKEADSIYLEDIETNKKMAKFGNEVIKENAVILTHCNTGALATVGYGTALGVIREAHYSGKNIF-VYADETRPRLQGSKLTAWELVQEGIPAKLIADSVAATLIRDGKIDVILVGADRIALNGDTANKIGTFMLSVIAKVYNVPFYVVAPTSTIDFEIESGKEIIIEERSPEEVTHINGVRIAPEGIEVYNPAFDVTPHENITGIITEKGIIKP 335          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_THEP3 (Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=mtnA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 65/262 (24.81%), Postives = 114/262 (43.51%), Query Frame = 3
Query:   21 KMTIPLRVSQSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAES----YKFARLYPLDQKDMGPALRPIDFGVPI-PSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            K+   L V  +   T+++L        + + +   LE  D   A   L + A+       +  K +A    + I +   IL H         G+   +  + +     K +F V   E RP   G +L A EL +  +P KL+ DS  A  + +  +D++ VGAD +  +G   N +GT+ ++++A   N P YV A +    ++      +  ++  P       GV I P  +EV   A D TP + +T + T+ G++ P
Sbjct:   78 KIEEALEVIANSRPTAVNLMWAVKRMKKVIEKNKELELIDIYQA---LKKEADSIYLEDIETNKKMAKFGNEVIKENAVILTHCNTGALATVGYGTALGVIREAHYSGKNIF-VYADETRPRLQGSKLTAWELVQEGIPAKLIADSVAATLIRDGKIDVILVGADRIALNGDTANKIGTFMLSVIAKVYNVPFYVVAPTSTIDFEIESGKEIIIEERSPEEVTHINGVRIAPEGIEVYNPAFDVTPHENITGIITEKGIIKP 335          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_ROSCS (Methylthioribose-1-phosphate isomerase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=mtnA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 51/161 (31.68%), Postives = 77/161 (47.83%), Query Frame = 3
Query:  297 LKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYP----LDQKDMGPALRPIDFGVPI-PSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            ++MA +  +   V   E RP   G RL A EL +  +P+ L+ D+   + M    +D V VGAD +V +G + N +GTY +A++A +   P YVAA S       P    +  ++  P      FG  I P        A D TP   +T + T+ GV+ P
Sbjct:  180 IRMAHEQGRPIHVYVDETRPFLQGARLTAWELLQERIPMTLITDTMAGHFMQRGAIDCVIVGADRIVANGDVANKIGTYSLAVLARAHGIPFYVAAPSSTIDLSLPNGEAIPIEERSPDEVTTCFGRRIAPEGAVAAHPAFDVTPSHLVTAIITECGVIYP 340          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_NATTJ (Methylthioribose-1-phosphate isomerase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=mtnA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 57/216 (26.39%), Postives = 98/216 (45.37%), Query Frame = 3
Query:  162 LIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMD--EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA--ESYKFARLYPLD---QKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTPS 758
            ++  A K  +   +    IA      I +G  IL H         G+    + V++ A  N K   V   E RP   G +L A EL +  +P  L+ DS+ A  +   ++D++FVGAD +  +G   N +GT+ ++++A     P YV A   +  F      D   ++     +  ID     P+ ++V   A D TP + +T + T+ G++ P+
Sbjct:  124 ILNEAHKISDQELQRNYRIAEFGDQVISNGDKILTHCNTGALATTGYG-TALGVIRQAHYNHKDIFVYVDETRPRLQGAKLTAWELKQEQLPFALIPDSSAAVLIKNGDIDVIFVGADRIASNGDTANKIGTFMLSILAKKYKVPFYVVAPVSTIDFQAKNGDDITIEERSSKEVTEIDGVRVAPTDIQVYNPAFDITPAENITGIITEKGIIGPN 338          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_ENT38 (Methylthioribose-1-phosphate isomerase OS=Enterobacter sp. (strain 638) GN=mtnA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 74/256 (28.91%), Postives = 103/256 (40.23%), Query Frame = 3
Query:   57 DTTSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH----GFSRV----VMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKF------ARLYPLDQKDMGPALRPI-DFGVP--IPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVV 764
            DT   S     +L         AL  EDF  A   L+  A +  E   +    IA      +  G  +L H    G +       + V+  A     +  V   E RP   G RL A EL +L VP +L+ DS  A  M   +VD V+VGAD +  +G + N +GTY +A++A     P YVAA               P++Q+D          FG     P   +V   A D TP   ++    D GV+ P  V
Sbjct:   80 DTLRASRPTAVNLMNNLDRMKQALWQEDFVPA---LVTEALRLIEEDKQLCDAIARAGSQLVKPGSRLLTHCNTGGLATAGVGTALGVIAHAFAAGNVNNVWVDETRPLLQGGRLTAWELGELGVPYQLITDSMAASLMAKGQVDAVWVGADRIAANGDVANKIGTYSLAVLAKFHGIPFYVAAPQTTLDPHCPNGEAIPIEQRDAREVTGVAGSFGAVQWAPENAQVYNPAFDVTPAALISGWVLDTGVVLPEAV 332          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_ANAVT (Methylthioribose-1-phosphate isomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=mtnA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 3
Query:  294 VLKMAAQNKKLFRVLCTEGRPDRSGLRLAN-ELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMGPALRPIDFGVPI-----------PSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            V++ A +  +L R+   E RP   G +L   E  +  +PV L+ D+  A+ M +  +D V VGAD +  +G   N +GTY +A+VA + N P +VAA       +  +D +    +  PI+   P+           P  VE    A D TP + +T + T+ G   P
Sbjct:  174 VVRSAWREGRLERLFADETRPRLQGAKLTTWECVQEGIPVTLITDNMAAHCMKQGLIDAVVVGADRIAANGDAANKIGTYSLAIVAKAHNVPFFVAAP------VSTIDFELTDGSQIPIEERNPVEIYQVGDTTLTPPGVEFYNPAFDVTPAELITAIITENGAFAP 335          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_ACIBL (Methylthioribose-1-phosphate isomerase OS=Acidobacteria bacterium (strain Ellin345) GN=mtnA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 50/160 (31.25%), Postives = 77/160 (48.12%), Query Frame = 3
Query:  294 VLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGV 746
            V++ A ++ K  RV   E RP   G RL A EL K  +   ++ D+     M +  +  V VGAD +  +G + N +GTY +A++A     P YVAA               P++Q++ G  +  I      P  V +E  A D TP +Y+T + T+ GV
Sbjct:  176 VIRAAVESGKNIRVFADETRPFLQGARLTAWELMKDGIDTTVISDNMAGAMMAQGKIQAVVVGADRIAANGDVANKIGTYTVAVLAKEHGIPFYVAAPWSTIDLDTPDGSKIPIEQRN-GREVTHIAGKQMTPDNVRIENPAFDVTPSKYVTAIITERGV 334          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA2_THELT (Methylthioribose-1-phosphate isomerase 2 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=mtnA2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 3
Query:  294 VLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQ-----KDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            V++ A +  K   V   E RP   G RL A E+ +L +P  +++D A    M +  +D+  VGAD +  +G   N +GTY +A+VA   N P+YV A +       P  Q     +     +R +      P +  V   A D TP + ++ + T+ G++ P
Sbjct:  171 VIRYAHEIGKKIHVFLDETRPRLQGARLSAWEMKELGIPHTIIVDGASGLVMKKFKIDLALVGADRIAANGDTANKIGTYNLAIVAKYHNVPLYVVAPTSTIDLKTPAGQDIPIEERSADEIRCVGNSQVAPQESPVFNPAFDVTPAELISGIITEKGIVYP 332          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA2_PETMO (Methylthioribose-1-phosphate isomerase 2 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=mtnA2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11
Identity = 59/227 (25.99%), Postives = 100/227 (44.05%), Query Frame = 3
Query:  126 LEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVV--------MEVLKMAAQNKKLFRVLCTEGRPDRSGLRLAN-ELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            L  ++ N   + L E A K      +  K I    +  + DG T+L H  +  +        + V++ A +N K  +V   E RP   G RL   EL K  +   L+ D+   + M +  ++ V VGAD +  +G + N +GTY +A++A     P YVAA         K     P+++++    +R       +   V +   A D TP + +T + T+  V+ P
Sbjct:  114 LPTKEINDLVTILEEEALKIAYEDIEINKQIGKNGEALLNDGDTVLTHCNAGALATVDYGTALGVIRAAVENGKDIQVYADETRPYLQGARLTVWELVKSGIKTTLITDNMAGWVMKQGKINAVIVGADRIARNGDVANKIGTYSVAVLAKRHGIPFYVAAPLSTIDIETKNGEGIPIEERNHN-EVRFCHKTRLVTDDVNIYNPAFDVTPNELVTAIITEKMVIRP 339          
The following BLAST results are available for this feature:
BLAST of EY728372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
MTNA_THETN7.909e-1125.81Methylthioribose-1-phosphate isomerase OS=Thermoan... [more]
MTNA_THEPX7.909e-1124.81Methylthioribose-1-phosphate isomerase OS=Thermoan... [more]
MTNA_THEP37.909e-1124.81Methylthioribose-1-phosphate isomerase OS=Thermoan... [more]
MTNA_ROSCS7.909e-1131.68Methylthioribose-1-phosphate isomerase OS=Roseifle... [more]
MTNA_NATTJ7.909e-1126.39Methylthioribose-1-phosphate isomerase OS=Natranae... [more]
MTNA_ENT387.909e-1128.91Methylthioribose-1-phosphate isomerase OS=Enteroba... [more]
MTNA_ANAVT7.909e-1129.76Methylthioribose-1-phosphate isomerase OS=Anabaena... [more]
MTNA_ACIBL7.909e-1131.25Methylthioribose-1-phosphate isomerase OS=Acidobac... [more]
MTNA2_THELT7.909e-1129.01Methylthioribose-1-phosphate isomerase 2 OS=Thermo... [more]
MTNA2_PETMO7.909e-1125.99Methylthioribose-1-phosphate isomerase 2 OS=Petrot... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-H05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728372 ID=EY728372; Name=EY728372; organism=Citrus sinensis; type=EST; length=793bp
CCACGCGTCCGCTTCCAGTCAAAATGACTATCCCTTTGCGTGTTTCCCAG
TCTTGGGACACGACATCTATTTCGCTGACAGCAGGCTGTGACCTGTTCAT
GCGATACGTTACCAGAACTTCAGCTTTAGAATATGAGGATTTTAATTCAG
CTAGATCTCGATTGATTGAACGTGCAGAGAAGTTTGGAGAGATATCTTAT
AAGGCACGAAAGATCATTGCAATGCTTAGTCAAGATTTTATATTTGATGG
TTGTACTATTTTGGTGCACGGCTTTTCCAGAGTTGTCATGGAAGTACTGA
AGATGGCAGCACAAAATAAGAAACTCTTTAGAGTTCTCTGCACAGAGGGA
AGGCCAGACAGATCAGGACTAAGATTGGCCAATGAGCTGGCCAAACTTGA
TGTTCCAGTGAAGCTCCTAATAGATTCTGCAGTTGCATATACAATGGACG
AAGTGGATATGGTATTTGTTGGAGCAGATGGAGTGGTCGAAAGTGGAGGC
ATTATTAACATGATGGGTACTTACCAGATTGCATTGGTTGCACACAGCAT
GAACAAACCAGTTTATGTGGCAGCTGAGAGCTACAAGTTTGCTCGTCTTT
ATCCATTGGACCAGAAAGACATGGGTCCTGCTTTACGCCCCATTGATTTT
GGGGTACCCATACCATCCAAGGTTGAAGTTGAGACATCTGCTCGGGATTA
TACTCCTCCACAATATCTTACTCTGCTATTCACAGATTTAGGTGTCCTTA
CTCCATCTGTAGTTAGTGATGAGCTTATTCCGCTTTACTGGTT
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