EY728372

Overview
NameEY728372
Unique NameEY728372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_GEOLS (Methylthioribose-1-phosphate isomerase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=mtnA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.450e-13
Identity = 67/235 (28.51%), Postives = 104/235 (44.26%), Query Frame = 3
Query:  102 RYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLAN-ELAKLDVPVKLLIDSAVAYTMD--EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALRPIDF-GVPI-PSKVEVETSARDYTPPQYLTLLFTDLGV 746
            R   +  +L+     + R+ L E A +         K I     D I +G TIL H         G+    + V++ A +  K  +V   E RP   G RL   EL K  +PV L+ D+   + M   E+    VGAD +  +G   N +GT+ +A++A     P YVAA       S       P++++   P+       G+PI P  V+V   + D TP +Y+T + T+ GV
Sbjct:  101 RMKQKALSLKGNPLETIRTGLKEEAIRIEAEDLAICKNIGRHGADLIPEGATILTHCNAGGLATAGYG-TALGVIRAAHEAGKRIQVFSDETRPWLQGARLTTWELMKDSIPVTLISDNMAGFFMSRGEITCCVVGADRIAANGDTANKIGTFSVAVLAREHGIPFYVAAPVSTLDLSLADGSRIPIEER---PSTEVTHIRGLPIAPEGVKVRNPSFDVTPAKYITAIITEYGV 331          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_PERMH (Methylthioribose-1-phosphate isomerase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=mtnA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 56/214 (26.17%), Postives = 100/214 (46.73%), Query Frame = 3
Query:  162 LIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVV--------MEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKF------ARLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLT 752
            L + AE+     Y A K I    Q  + + C +L H  +  +        + V++ A +N K   V   E RP   G RL A EL +  +P  L+ D++  + M +  +D + VGAD +  +G + N +GTY +A++A +   P YVAA +  F       +  P++++      +     +  P + E    + D TP   +T + T+ G+++
Sbjct:  125 LFKEAERIDLEDYHANKAIGGYGQVLLPERCNVLTHCNTGALATSGWGTALGVIRSAFENGKDITVYVDETRPYLQGSRLTAWELVEEGIPHYLITDNSAGFLMSKGIIDAIIVGADRITANGDVANKIGTYTLAVLAEAHGIPFYVAAPTSTFDLDTDSGKDIPIEERSQLEVKKCGGCDI-APEETEALNYSFDVTPASKITAIITEKGIIS 337          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_RHOFD (Methylthioribose-1-phosphate isomerase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mtnA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 61/224 (27.23%), Postives = 96/224 (42.86%), Query Frame = 3
Query:  162 LIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVV--------MEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMD--EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMGPALRPIDFGVPIPSK-----------------VEVETSARDYTPPQYLTLLFTDLGVL 749
            L+ +A +      +  + +       + DG  +L H  +  +        + V++ A Q  K   V+  E RP   G RL A E+ + ++PV L+ D+   + M   EVD + VG D V  +G + N +GTY +A++A   N P YVA          PL   D+     P    +PI  +                 V+V   A D TP + +T L T+ GVL
Sbjct:  129 LLAQAHEISADDVRINRAMGAYGAALLADGARVLTHCNAGALATAGHGTALGVIRSAVQAGKRISVIADETRPFLQGARLTAWEMVQENIPVTLITDNMAGHLMSRGEVDAIVVGTDRVAANGDVANKIGTYMVAVLAQRHNIPFYVAC---------PLSTIDLA---IPDGAAIPIEERAAEEVTGFRDCQWAAKGVQVRNPAFDVTPAELVTALITERGVL 340          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_GEOBB (Methylthioribose-1-phosphate isomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=mtnA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 74/252 (29.37%), Postives = 109/252 (43.25%), Query Frame = 3
Query:   63 TSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMD--EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMGPALRPID----------FGVPI-PSKVEVETSARDYTPPQYLTLLFTDLGVL 749
            T+++L  G +   R   +   L   + NS R  L   A           K I       + +G +IL H         G+    + V++ A +  K  RV   E RP   G RL A EL K  +PV L+ D+   + M   ++D   VGAD +  +G   N +GTY +A++A     P YVAA       +  LD K     L PI+           G+ I P  V+V   A D TP +Y+T + T+ GV+
Sbjct:   91 TAVNLFWGLERMKRVALQHKEL---NLNSIRELLKAEAISIETEDLAICKEIGRHGAALVKEGASILTHCNAGGLATAGYG-TALGVIRGAHEAGKGIRVFADETRPWLQGARLTAWELMKDSIPVTLISDNMAGWLMKTGQIDFCVVGADRIAANGDTANKIGTYSVAVLAKENRIPFYVAAP------ISTLDLKLANGDLIPIEERASEEVTQIKGIQIAPEGVKVRNPAFDVTPARYITGIITEKGVV 332          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_THEYD (Methylthioribose-1-phosphate isomerase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=mtnA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 60/252 (23.81%), Postives = 108/252 (42.86%), Query Frame = 3
Query:   63 TSISLTAGCDLFMRYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH--------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALRPIDFGVPI-PSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVV 764
            T+I++    D     +    +L   +    +  ++  A +      +  K I   +  F  +GCT++ +        G        + +A +    F+V+  E RP   G R+ A EL K  + V L+ D+     + +  +D   VG D  V +G + N +GTY ++++    N P YVAA       S     + P++++           GV I P  ++V   A D TP +Y+T + T+ G+  PS +
Sbjct:   92 TAINIKWAIDRMQNLIKNNLSLPVSEL---KDMILNEAIRIHNEDIQVNKRIGEYALAFFKEGCTVITYCNAGALATGGYGTATAPMYLAKEKGIKFKVIACETRPVLQGARITAFELMKAGIDVTLICDNTAGALLRKGMIDFAIVGTDRTVRNGDVANKIGTYSLSVLCKENNVPFYVAAPTSSIDLSIPSGDMIPIEERSFEEV--TTIKGVKIAPEGIKVINFAFDVTPAKYVTAIITEKGIFKPSEI 338          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_FERNB (Methylthioribose-1-phosphate isomerase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=mtnA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 62/215 (28.84%), Postives = 98/215 (45.58%), Query Frame = 3
Query:  162 LIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVV--------MEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            L + A K  +   +  K I       + DG T+L H  +  +        + VL+ A +  K  +V   E RP   G RL A EL K    V L+ D+   + M +  ++ V VGAD +  +G + N +GTY +A++A+    P YVAA       S K  +  P++++     L      V  P+ V V   A D T  + +T + T+ GV+ P
Sbjct:  123 LEDEALKIAKEDIEVNKAIGRNGAQLLQDGFTVLTHCNAGALATVDYGTALGVLRAAKEQGKKIKVYADETRPYLQGARLTAWELMKDGFDVTLISDNMAGWVMKQGKINAVIVGADRIAANGDVANKIGTYMVAVLANRHGIPFYVAAPLSTIDMSIKSGKEIPIEERSHEEVLTCGGKRV-APNNVNVYNPAFDVTDHELVTAIITEKGVVYP 336          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_PELCD (Methylthioribose-1-phosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=mtnA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.459e-12
Identity = 65/253 (25.69%), Postives = 105/253 (41.50%), Query Frame = 3
Query:   57 DTTSISLTAGCDLFM---RYVTRTSALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH--------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALR--PIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVL 749
            DT + +     +LF    R   +   L     ++ ++ L++ A+          + +     + I D   +L H        G     + V++ A ++ K   VL  E RP   G RL A EL K  +PV L+ D+     M   E+D V VGAD +  +G + N +GTY +A++A     P YVAA               P++++D        P       P  + V   A D TP   +T + T+ GV+
Sbjct:   83 DTLAATRPTAVNLFWALERMQAKARELAALPLDAIKAALMDEAQAIAAQDDAINRAMGRHGAELIADNARVLTHCNAGALATGGYGTALGVIRAAVESGKKISVLADETRPFLQGSRLTAWELHKDGIPVTLICDNMAGALMRQGEIDCVIVGADRIAANGDVANKIGTYSVAVLAKEHGLPFYVAAPLSTIDLKIPDGDHIPIEERDTSEVTHCGPTRLA---PEGINVRNPAFDVTPAGLITAIITERGVV 332          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_GEOSL (Methylthioribose-1-phosphate isomerase OS=Geobacter sulfurreducens GN=mtnA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 60/204 (29.41%), Postives = 92/204 (45.10%), Query Frame = 3
Query:  210 KIIAMLSQDFIFDGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMD--EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVS 767
            K I       I +G T+L H         G+    + V++ A    K  +V   E RP   G RL A EL K  +PV L+ D+   + M   E+    VGAD +  +G   N +GTY +A++A   N P YVAA       S +     P++++          F V  P  + V   A D TP +Y++ + T+ GV++   V+
Sbjct:  137 KAIGRHGAALIPEGATVLTHCNAGGLATAGYG-TALGVIRAAHDAGKKIQVFADETRPWLQGARLTAWELMKDGIPVTLISDNMAGFFMKRGEIACCVVGADRIAANGDTANKIGTYSVAVLAKENNIPFYVAAPTTTLDLSLENGDQIPIEERHSREVTHLHGFPV-APEGIRVRNPAFDVTPARYISAIITEQGVVSGDYVT 338          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_KLEP7 (Methylthioribose-1-phosphate isomerase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mtnA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 58/170 (34.12%), Postives = 83/170 (48.82%), Query Frame = 3
Query:  294 VLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFAR------LYPLDQKDMGPALRPI-DFGVP--IPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVS 767
            V+ +A +  K+  V   E RP   G RL A EL +L VP +L+ DS  A  M   +VD V+VGAD +  +G + N +GTY +A++AH    P YVAA      R        P++Q+           FG     P+   V   A D TP   ++    D GV+TP+ V+
Sbjct:  164 VIALAHRQGKVTNVWVDETRPLLQGGRLTAWELGELGVPYQLIADSMAASLMAQGQVDAVWVGADRIAANGDVANKIGTYSLAVLAHYHQIPFYVAAPQTTLDRYCPNGAAIPIEQRAAAEVTGVAGSFGAVQWAPTGAAVYNPAFDVTPAGLISGWVLDSGVVTPAQVA 333          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_GEOMG (Methylthioribose-1-phosphate isomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=mtnA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 3
Query:  210 KIIAMLSQDFIFDGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMD--EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALRPIDFGVPI-PSKVEVETSARDYTPPQYLTLLFTDLGVLT 752
            K I       I +G T+L H         G+    + V++ A +  K  +V   E RP   G RL A EL K  +PV L+ D+   + M   E+    VGAD +  +G   N +GTY +A++A   N P YVAA       S +     P++++           G+P+ P  + V   A D TP +Y+  + T+ GV+T
Sbjct:  137 KAIGRHGAGLIPEGATVLTHCNAGGLATAGYG-TALGVIRAAHEAGKNIQVFADETRPWLQGARLTAWELMKDGIPVTLISDNMAGFFMKRGEITCCVVGADRIAANGDTANKIGTYSVAVLAKENNIPFYVAAPTSTLDLSLENGDQIPIEERHAREVTHL--QGLPVAPEGIAVRNPAFDVTPARYIAGIITEKGVIT 333          
The following BLAST results are available for this feature:
BLAST of EY728372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
MTNA_GEOLS8.450e-1328.51Methylthioribose-1-phosphate isomerase OS=Geobacte... [more]
MTNA_PERMH1.104e-1226.17Methylthioribose-1-phosphate isomerase OS=Persepho... [more]
MTNA_RHOFD1.441e-1227.23Methylthioribose-1-phosphate isomerase OS=Rhodofer... [more]
MTNA_GEOBB1.441e-1229.37Methylthioribose-1-phosphate isomerase OS=Geobacte... [more]
MTNA_THEYD1.883e-1223.81Methylthioribose-1-phosphate isomerase OS=Thermode... [more]
MTNA_FERNB1.883e-1228.84Methylthioribose-1-phosphate isomerase OS=Fervidob... [more]
MTNA_PELCD2.459e-1225.69Methylthioribose-1-phosphate isomerase OS=Pelobact... [more]
MTNA_GEOSL4.194e-1229.41Methylthioribose-1-phosphate isomerase OS=Geobacte... [more]
MTNA_KLEP75.477e-1234.12Methylthioribose-1-phosphate isomerase OS=Klebsiel... [more]
MTNA_GEOMG5.477e-1230.00Methylthioribose-1-phosphate isomerase OS=Geobacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-H05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728372 ID=EY728372; Name=EY728372; organism=Citrus sinensis; type=EST; length=793bp
CCACGCGTCCGCTTCCAGTCAAAATGACTATCCCTTTGCGTGTTTCCCAG
TCTTGGGACACGACATCTATTTCGCTGACAGCAGGCTGTGACCTGTTCAT
GCGATACGTTACCAGAACTTCAGCTTTAGAATATGAGGATTTTAATTCAG
CTAGATCTCGATTGATTGAACGTGCAGAGAAGTTTGGAGAGATATCTTAT
AAGGCACGAAAGATCATTGCAATGCTTAGTCAAGATTTTATATTTGATGG
TTGTACTATTTTGGTGCACGGCTTTTCCAGAGTTGTCATGGAAGTACTGA
AGATGGCAGCACAAAATAAGAAACTCTTTAGAGTTCTCTGCACAGAGGGA
AGGCCAGACAGATCAGGACTAAGATTGGCCAATGAGCTGGCCAAACTTGA
TGTTCCAGTGAAGCTCCTAATAGATTCTGCAGTTGCATATACAATGGACG
AAGTGGATATGGTATTTGTTGGAGCAGATGGAGTGGTCGAAAGTGGAGGC
ATTATTAACATGATGGGTACTTACCAGATTGCATTGGTTGCACACAGCAT
GAACAAACCAGTTTATGTGGCAGCTGAGAGCTACAAGTTTGCTCGTCTTT
ATCCATTGGACCAGAAAGACATGGGTCCTGCTTTACGCCCCATTGATTTT
GGGGTACCCATACCATCCAAGGTTGAAGTTGAGACATCTGCTCGGGATTA
TACTCCTCCACAATATCTTACTCTGCTATTCACAGATTTAGGTGTCCTTA
CTCCATCTGTAGTTAGTGATGAGCTTATTCCGCTTTACTGGTT
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