EY728372

Overview
NameEY728372
Unique NameEY728372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_AQUAE (Methylthioribose-1-phosphate isomerase OS=Aquifex aeolicus GN=mtnA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 58/219 (26.48%), Postives = 99/219 (45.21%), Query Frame = 3
Query:  168 ERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVV--------MEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQ----KDMGPALRPIDFGVPI-PSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSDEL 776
            E A++  +  Y+A K +  +  + +     +L H  +  +        + V++ A    K   V   E RP   G RL A EL K  +P K++ DS   + M +  VD+V VGAD +   G + N +GTY +A++    N P YVAA +          +    ++  P    +  G  I P + +    A D TP + +T + T+ G+  P  +++ L
Sbjct:  236 EEAKEIEKEDYEANKRMGEIGSEIVPLNAKVLTHCNTGALATAGWGTALGVIRSAHYGGKNIFVWVDETRPYLQGARLTAWELVKESIPHKIITDSTAGFLMKKGMVDLVIVGADRITAKGDVANKIGTYTLAVLCKEHNVPFYVAAPTSTIDSNIKSGEEIIIEERSPEEVKVCGGCAIAPKESDALHLAFDITPAELITGIITEKGIFKPERITEAL 454          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_YERE8 (Methylthioribose-1-phosphate isomerase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mtnA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 57/171 (33.33%), Postives = 84/171 (49.12%), Query Frame = 3
Query:  294 VLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKF------ARLYPLDQKDMGPALRPIDFGVP----IPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVS 767
            VL  A Q  K+ +V   E RP   G RL A EL +L +P +L+ DS  A  M +  VD V+VGAD +  +G + N +GTY +A++A+    P YVAA               P++Q+D    ++ +  G       P+   V   A D TP   ++    D GV+TP  V+
Sbjct:  169 VLLRAHQQGKIKQVWVDETRPLLQGGRLTAWELGELGIPYQLICDSMAASLMAQGRVDAVWVGADRIAANGDVANKIGTYSLAVLANYHRIPFYVAAPHTTHDPDCPNGAAIPIEQRD-ASEVKGVSGGFGHCQWAPANAPVYNPAFDVTPAALISGWVLDSGVITPGQVA 338          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_KLEP3 (Methylthioribose-1-phosphate isomerase OS=Klebsiella pneumoniae (strain 342) GN=mtnA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 58/170 (34.12%), Postives = 82/170 (48.24%), Query Frame = 3
Query:  294 VLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTM--DEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFAR------LYPLDQKDMGPALRPI-DFGVP--IPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVS 767
            V+ +A +  K+  V   E RP   G RL A EL +L VP +L+ DS  A  M   +VD V+VGAD +  +G + N +GTY +A++AH    P YVAA      R        P++Q+           FG     P    V   A D TP   ++    D GV+TP+ V+
Sbjct:  164 VIALAHRQGKVANVWVDETRPLLQGGRLTAWELGELGVPYQLITDSMAASLMAQGQVDAVWVGADRIAANGDVANKIGTYSLAVLAHYHQIPFYVAAPQTTLDRYCPNGAAIPIEQRAAAEVTGVAGSFGAVQWAPMGAAVYNPAFDVTPAGLVSGWVLDSGVVTPAQVA 333          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_SYNY3 (Methylthioribose-1-phosphate isomerase OS=Synechocystis sp. (strain PCC 6803) GN=mtnA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 51/168 (30.36%), Postives = 82/168 (48.81%), Query Frame = 3
Query:  294 VLKMAAQNKKLFRVLCTEGRPDRSGLRLAN-ELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA--ESYKFA----RLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTPSVVSD 770
            V++ A    +L RV   E RP   G +L   E  +  +PV L+ D+  A+ M +  +D V VGAD +  +G I N +GTY +A++A     P +VAA   +  FA       P++++D     +P    +  P   E    A D TP   +T + T+ G + P  ++D
Sbjct:  182 VIRAAWSAGRLARVYADETRPRLQGAKLTVWECVQAGIPVTLITDNMAAHCMQQQRIDAVVVGADRIARNGDIANKIGTYGLAVLAKMHAIPFFVAAPLSTVDFALDDGSQIPIEERDPVEIYQPEGNRI-TPEGAEFYNPAFDVTPASLITAIITEQGAIAPEKLAD 348          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_SYNWW (Methylthioribose-1-phosphate isomerase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=mtnA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 59/217 (27.19%), Postives = 97/217 (44.70%), Query Frame = 3
Query:  159 RLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRLAN-ELAKLDVPVKLLIDSAVAYTMD--EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            RL + A+   +   +  + I    Q+ + +G  ++           G+    + V++ AA+  K+  V   E RP   G RL   EL +  +PV LL D+   YTM   +VD V  GAD +  +G   N +GTY +A++A     P YVAA       + K     P++++     +R I         V+V   A D TP   +T +  + G++ P
Sbjct:  118 RLCQEAQNLYKEDIRVNEAIGEQGQELLGEGSRVMTICNAGALATCGYG-TALGVIRSAARRNKIEMVWACETRPVLQGSRLTVWELWQDKIPVTLLTDNMAGYTMSLGKVDAVITGADRIATNGDTANKIGTYSLAVLAKYHGIPFYVAAPLSTFDWNIKQGGEIPIEERS-AEEVRTIKGSCLTVPVVDVFNPAFDITPEHLITAIICEKGIIRP 332          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_TRIEI (Methylthioribose-1-phosphate isomerase OS=Trichodesmium erythraeum (strain IMS101) GN=mtnA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11
Identity = 48/163 (29.45%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  294 VLKMAAQNKKLFRVLCTEGRPDRSGLRLAN-ELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE----SYKFA--RLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            V++ A ++ +L +V   E RP   G +L   E  + ++PV L+ D+  A+ M +  +  V VGAD +  +G   N +GTY +A+V+ + N P+YVAA      +K +     P++++D     +  +  +  P +VE    A D TP + +T + T+ G + P
Sbjct:  180 VIRSAWRDGRLGKVYADETRPRLQGAKLTTWECVQENIPVTLISDNMAAHCMKQGLIHAVVVGADRIAANGDTANKIGTYSLAIVSQAHNIPLYVAAPLSTIDFKISDGSEIPIEERDTKEIYQVGETRI-CPKQVEFYNPAFDVTPAELITGIMTEHGTVLP 341          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_THEAB (Methylthioribose-1-phosphate isomerase OS=Thermosipho africanus (strain TCF52B) GN=mtnA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11
Identity = 61/229 (26.64%), Postives = 101/229 (44.10%), Query Frame = 3
Query:  120 SALEYEDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVV--------MEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMD--EVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAE------SYKFARLYPLDQKDMGPALRPIDFGVPIPSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            S  +Y         L E A    +   +  K I     + + DG T+L H  +  +        + V++ A +  K  +V   E RP   G RL A EL K  + V L+ D+   ++M   +++ V VGAD V  +G + N +GTY +A++A     P YVAA       + K  +  P++++            +  P  V+V   A D T  + +T + T+ GV+ P
Sbjct:  107 SLKKYGKIEGILEYLEEEAMNIAKEDIEVNKAIGRYGAELLKDGDTVLTHCNAGALATVDYGTALGVIRAAVEQGKKIKVFADETRPYLQGARLTAWELMKDGIDVTLISDNMSGWSMKLGKINAVIVGADRVAANGDVANKIGTYMVAVLAKRHGIPFYVAAPTSTIDLNTKTGKDIPIEERKHTEVTHCGGKQI-APDGVKVFNPAFDVTDAELVTAIITEKGVVYP 334          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_MOUSE (Methylthioribose-1-phosphate isomerase OS=Mus musculus GN=Mri1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11
Identity = 73/229 (31.88%), Postives = 101/229 (44.10%), Query Frame = 3
Query:  147 SARSRLIERAEKFGEISYKARKIIAMLSQDFIFDGC-------TILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDMGPALRPID-----FGVPIPSK-VEVETSARDYTPPQYLT-LLFTDLGVLTP 755
            + R R+I  AE   E   K  + I  L    + +         T+L H         G+    + V++   +  +L    CTE RP   G RL A EL    +P  L+ DS  A  M    V  V VGAD VV +G   N +GTYQ+A+VA     P YVAA S     L+    K++    RP        GV I ++ + V   A D TP + +T  + T+LGV  P
Sbjct:  120 TVRERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYG-TALGVIRSLHEMGRLEHTFCTETRPYNQGARLTAFELVYEQIPATLITDSMAAAAMAHRGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHHGVPFYVAAPS-SSCDLHLETGKEIVIEERPSQELTDLNGVRIAAQGIRVWNPAFDVTPHELITGGIITELGVFAP 346          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_SCHPO (Methylthioribose-1-phosphate isomerase OS=Schizosaccharomyces pombe GN=mri1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 48/163 (29.45%), Postives = 77/163 (47.24%), Query Frame = 3
Query:  135 EDFNSARSRLIERAEKFGEISYKARKIIAMLSQDFIF------DGCTILVH---------GFSRVVMEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA 575
            ++  + R+++I+ AE+      +    I    + F+       D  T+L H         G+    + +++   ++  L    CTE RP   G RL A EL    +P  L+ DS VA  M ++D + VGAD V  +G   N +GTY +A++A    KP  VAA
Sbjct:  106 QEGKNCRNKIIQEAERMLVKDLEDNHNIGTAGRKFLLQHYKDKDKLTVLTHCNTGSLATSGYG-TALGIIRSLHESGNLEHAYCTETRPYNQGSRLTAFELVHDKIPATLVTDSTVASIMHKIDAIVVGADRVTRNGDTANKIGTYNLAILAKHFGKPFIVAA 267          
BLAST of EY728372 vs. ExPASy Swiss-Prot
Match: MTNA_THESQ (Methylthioribose-1-phosphate isomerase OS=Thermotoga sp. (strain RQ2) GN=mtnA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.550e-11
Identity = 66/220 (30.00%), Postives = 98/220 (44.55%), Query Frame = 3
Query:  162 LIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHGFSRVV--------MEVLKMAAQNKKLFRVLCTEGRPDRSGLRL-ANELAKLDVPVKLLIDSAVAYTMDE--VDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAA------ESYKFARLYPLDQKDMGPALRPIDF----GVPI-PSKVEVETSARDYTPPQYLTLLFTDLGVLTP 755
            L   A K      +  K I       I DG TIL H  +  +        + V++ A ++ K  RV   E RP   G RL A EL K  + V ++ D+   + M +  +D V VGAD +  +G   N +GTY +A++A   N P YVAA       + K     P++++      RP +     G  I P  V+V   A D T    +T + T+ GV+ P
Sbjct:  118 LENEALKMAYEDIEVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAMESGKRIRVFADETRPYLQGARLTAWELMKDGIEVYVITDNMAGWLMKKGLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIKSGEEIPIEER------RPEEVTHCGGNRIAPEGVKVLNPAFDVTENTLITAIITEKGVIRP 331          
The following BLAST results are available for this feature:
BLAST of EY728372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
MTNA_AQUAE9.343e-1226.48Methylthioribose-1-phosphate isomerase OS=Aquifex ... [more]
MTNA_YERE81.220e-1133.33Methylthioribose-1-phosphate isomerase OS=Yersinia... [more]
MTNA_KLEP31.220e-1134.12Methylthioribose-1-phosphate isomerase OS=Klebsiel... [more]
MTNA_SYNY31.594e-1130.36Methylthioribose-1-phosphate isomerase OS=Synechoc... [more]
MTNA_SYNWW1.594e-1127.19Methylthioribose-1-phosphate isomerase OS=Syntroph... [more]
MTNA_TRIEI2.081e-1129.45Methylthioribose-1-phosphate isomerase OS=Trichode... [more]
MTNA_THEAB2.081e-1126.64Methylthioribose-1-phosphate isomerase OS=Thermosi... [more]
MTNA_MOUSE2.081e-1131.88Methylthioribose-1-phosphate isomerase OS=Mus musc... [more]
MTNA_SCHPO2.718e-1129.45Methylthioribose-1-phosphate isomerase OS=Schizosa... [more]
MTNA_THESQ3.550e-1130.00Methylthioribose-1-phosphate isomerase OS=Thermoto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-H05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728372 ID=EY728372; Name=EY728372; organism=Citrus sinensis; type=EST; length=793bp
CCACGCGTCCGCTTCCAGTCAAAATGACTATCCCTTTGCGTGTTTCCCAG
TCTTGGGACACGACATCTATTTCGCTGACAGCAGGCTGTGACCTGTTCAT
GCGATACGTTACCAGAACTTCAGCTTTAGAATATGAGGATTTTAATTCAG
CTAGATCTCGATTGATTGAACGTGCAGAGAAGTTTGGAGAGATATCTTAT
AAGGCACGAAAGATCATTGCAATGCTTAGTCAAGATTTTATATTTGATGG
TTGTACTATTTTGGTGCACGGCTTTTCCAGAGTTGTCATGGAAGTACTGA
AGATGGCAGCACAAAATAAGAAACTCTTTAGAGTTCTCTGCACAGAGGGA
AGGCCAGACAGATCAGGACTAAGATTGGCCAATGAGCTGGCCAAACTTGA
TGTTCCAGTGAAGCTCCTAATAGATTCTGCAGTTGCATATACAATGGACG
AAGTGGATATGGTATTTGTTGGAGCAGATGGAGTGGTCGAAAGTGGAGGC
ATTATTAACATGATGGGTACTTACCAGATTGCATTGGTTGCACACAGCAT
GAACAAACCAGTTTATGTGGCAGCTGAGAGCTACAAGTTTGCTCGTCTTT
ATCCATTGGACCAGAAAGACATGGGTCCTGCTTTACGCCCCATTGATTTT
GGGGTACCCATACCATCCAAGGTTGAAGTTGAGACATCTGCTCGGGATTA
TACTCCTCCACAATATCTTACTCTGCTATTCACAGATTTAGGTGTCCTTA
CTCCATCTGTAGTTAGTGATGAGCTTATTCCGCTTTACTGGTT
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