EY711478

Overview
NameEY711478
Unique NameEY711478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.323e-29
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLSE SLFVY YK++ K  G       +P
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKIIIKTCGTTKLLLAIP 93          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM2_ARATH (S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.564e-29
Identity = 60/84 (71.43%), Postives = 74/84 (88.10%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVG 757
            + +SAIGFEGYEKRLEV+FFEPG+F D  G+GLR+L+K Q+DEIL+PAECTIVSSLSN+ LDSYVLSE SLF++PYK++ K  G
Sbjct:    1 MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQLDSYVLSESSLFIFPYKIVIKTCG 84          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.631e-28
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLSE SLFVY YK++ K  G       +P
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKLIIKTCGTTKLLLSIP 93          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.631e-28
Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILPS 787
            + VSAIGFEGYEKRLEVSFFEP +F D  G+GLR+L K Q+DEIL PAECTIVSSLSN+ LDSYVLSE SLF++PYK++ K  G    + +LPS
Sbjct:    1 MSVSAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRALPKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCG---TTKLLPS 91          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.131e-28
Identity = 60/84 (71.43%), Postives = 71/84 (84.52%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVG 757
            + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LSK  LDEIL PAECTIV SL+NE +DSYVLSE SLFVY YK++ K  G
Sbjct:   16 MTISAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAHLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCG 99          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.381e-27
Identity = 62/93 (66.67%), Postives = 71/93 (76.34%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            + +SAIGFEGYEKRLEV+FFEP +F D  G GLR+L+K QLDEIL PA CTIVSSLSN+ LDSYVLSE S FVYPYKV+ K  G       +P
Sbjct:    1 MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIP 93          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.804e-27
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 2
Query:  515 SAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            SAIGFEG+EKRLE+SFF PG   DP  RGLRSL+K+QLD+ L PAECTIVSSLSN+ LDSYVLSE SLFVYPYK++ K  G       +P
Sbjct:    3 SAIGFEGFEKRLEISFFNPGPSVDPVARGLRSLTKNQLDKFLAPAECTIVSSLSNDLLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIP 92          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM_SPIOL (S-adenosylmethionine decarboxylase proenzyme OS=Spinacia oleracea GN=SAMDC PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.044e-27
Identity = 57/84 (67.86%), Postives = 70/84 (83.33%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVG 757
            + +SAIGFEG+EKRLE++FFEP +F DP G+GLR+L K QLDEIL PAECTIV SL+NE +DSYVLSE SLF+Y YK++ K  G
Sbjct:    1 MAISAIGFEGFEKRLEITFFEPSIFVDPEGKGLRALCKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFIYAYKIIIKTCG 84          

HSP 2 Score: 21.1718 bits (43), Expect = 3.044e-27
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1
Query:  739 IIKTCGTT 762
            IIKTCGTT
Sbjct:   79 IIKTCGTT 86          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM3_BRAJU (S-adenosylmethionine decarboxylase proenzyme 3 OS=Brassica juncea GN=SAMDC3 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.952e-27
Identity = 61/93 (65.59%), Postives = 70/93 (75.27%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVGLQAASFILP 784
            + +SAIGFEGYEKRLEVSFFEP  F D  G GLR+L++ QLDEIL PA C IVSSLSN++LDSYVLSE S FVYPYKV+ K  G       +P
Sbjct:    1 MALSAIGFEGYEKRLEVSFFEPSFFQDSKGLGLRALTRSQLDEILTPAACEIVSSLSNDHLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIP 93          
BLAST of EY711478 vs. ExPASy Swiss-Prot
Match: DCAM1_BRAJU (S-adenosylmethionine decarboxylase proenzyme 1 OS=Brassica juncea GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.527e-26
Identity = 58/84 (69.05%), Postives = 70/84 (83.33%), Query Frame = 2
Query:  506 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSEISLFVYPYKVLSKLVG 757
            + +SAIGFEG  +RLEVSFFEP +F D  G+GLR+LSK Q+DEIL PAECTIVSSLSN+ LDSYVLSE SLF++PYK++ K  G
Sbjct:    1 MSLSAIGFEGLRERLEVSFFEPSLFLDTHGKGLRALSKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCG 84          
The following BLAST results are available for this feature:
BLAST of EY711478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DCAM_VICFA7.323e-2967.74S-adenosylmethionine decarboxylase proenzyme OS=Vi... [more]
DCAM2_ARATH9.564e-2971.43S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM_PEA1.631e-2867.74S-adenosylmethionine decarboxylase proenzyme OS=Pi... [more]
DCAM2_BRAJU1.631e-2868.09S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM2_DIACA2.131e-2871.43S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM1_ARATH1.381e-2766.67S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM_HELAN1.804e-2767.78S-adenosylmethionine decarboxylase proenzyme OS=He... [more]
DCAM_SPIOL3.044e-2767.86S-adenosylmethionine decarboxylase proenzyme OS=Sp... [more]
DCAM3_BRAJU8.952e-2765.59S-adenosylmethionine decarboxylase proenzyme 3 OS=... [more]
DCAM1_BRAJU1.527e-2669.05S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-B11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711478 ID=EY711478; Name=EY711478; organism=Citrus sinensis; type=EST; length=857bp
GGAAGGAAATCGAAATTCGTTTTGTGAAACAGAGTTAAAAATCAACCCTT
CTTTAATCCTCAAGGAATTTTATTATTTTTTTGGTCTCTGAATCGAGGGT
TTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTATATTATCTGAGAAAGG
CTGAATGATCTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGCAGTAG
TTCCTTATTCTACGAAGCTCCTCTTGGTTACAGCATTGAAGACGTTCGAC
CTCACGGTGGCATAAAGAAGTTCAGATCAGCTGCTTACTCAAACTGCGTC
CGCAAACCATCCTGAGATCGTCCAATTTGTCCCATACCCCCCCAAAAAAA
AGCTCACTACTACTGCAATTTTAATTTTTTTTAGTTTTAGCCGTCTTAAT
ACTGCAATTTACTTGGCCTATTTCTTTTTCGACTTCCCTCGTTCTCTCGT
TCTGCCCTCTTTGCTCTTTGCAATTGTCATTTGTTTTCTGTAAGGCAAGA
TGGCCTTGCCAGTCTCTGCAATTGGATTTGAAGGTTATGAAAAGAGGCTT
GAAGTTTCCTTTTTTGAGCCTGGTGTCTTTGCTGATCCTGGAGGTAGGGG
CCTCCGCTCTCTGTCAAAACATCAATTGGATGAAATACTGAAACCTGCGG
AATGCACAATTGTTTCTTCGTTGTCAAATGAATATCTTGATTCATATGTC
CTCTCAGAAATCAGCCTCTTTGTGTACCCTTACAAAGTATTATCAAAACT
TGTGGGACTACAAGCTGCTTCTTTCATCCTGCCATCCTCAAGTATCTGAG
TCCCTCTCGTTGTCTGGTCGATCTGTGAGATCACTCGTGGAAGCTCATAT
TTGCTGG
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