EY711461

Overview
NameEY711461
Unique NameEY711461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.140e-31
Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 3
Query:   87 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            +EH K A GWAA+D SGVLSP++FSRRA  + DVT KV +CGICH+DLH++KN+WGN +YP+VPGHEIVGVVT VG+ V+KFK GD  G
Sbjct:   77 EEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVG 165          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.318e-31
Identity = 60/90 (66.67%), Postives = 75/90 (83.33%), Query Frame = 3
Query:   84 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E+E    AFGWAA+D+SG LSPF FSRR TGE++V  KV +CGICHSDLH +KNEW ++IYP+VPGHEI+G V+E+G+KVSKF +GDK G
Sbjct:    7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVG 96          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.151e-30
Identity = 58/83 (69.88%), Postives = 66/83 (79.52%), Query Frame = 3
Query:  105 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGHEIVG+ T+VG  V+KFK GD+ G
Sbjct:    7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVG 89          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.151e-30
Identity = 58/83 (69.88%), Postives = 66/83 (79.52%), Query Frame = 3
Query:  105 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGHEIVG+ T+VG  V+KFK GD+ G
Sbjct:    7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVG 89          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.258e-30
Identity = 56/83 (67.47%), Postives = 67/83 (80.72%), Query Frame = 3
Query:  105 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            AFGWAAKD SG LSPFHF+RR     DVT K+ +CG+CHSDLH +KN+WG T YP+VPGHEI G+VT+VGS V+KFK GD+ G
Sbjct:    6 AFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVG 88          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.258e-30
Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 3
Query:  105 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            A GWAA+DTSG LSPF F+RR   E DVT KV +CGICH+DLH+IKNEWGN +YP+VPGHEIVGVVT VG+ V+KFK GD  G
Sbjct:    8 ALGWAARDTSGHLSPFSFTRRVQQEDDVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVG 90          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.013e-28
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 3
Query:  138 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            +LSPF FSRRATG+ DV FKV +CG+CHSDLHM+KNEWG T YPIVPGHEIVG VTEVGSKV KFKVGD  G
Sbjct:    1 ILSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGSKVEKFKVGDAVG 72          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.629e-28
Identity = 57/93 (61.29%), Postives = 67/93 (72.04%), Query Frame = 3
Query:   75 QAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            QAP  +H + A G AA D SG L+P   SRR TG+ DV  KV +CGICHSDLH IKNEW N +YP+V GHEI GVVTEVG  V++FK GD+ G
Sbjct:   13 QAPPPQHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVG 105          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.434e-28
Identity = 56/83 (67.47%), Postives = 65/83 (78.31%), Query Frame = 3
Query:  105 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            A GWAA+D SG LSPF F+RR   E DVT KV +CGICH+DLH IKNEWGN +YP+VPGHEIVGVV  VG+ V++FK GD  G
Sbjct:    8 ALGWAARDASGHLSPFSFTRRVQEEDDVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVG 90          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.704e-27
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 3
Query:   87 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            ++ PK   GWAA+D +G+LSPF +  RA G++DV  K+  CGICHSDL  IKNEWGN  YP+VPGHEIVGVV EVGS V++F  GD  G
Sbjct:    2 EQQPKMVTGWAARDANGLLSPFSYPLRAKGDEDVVVKILFCGICHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVG 90          
The following BLAST results are available for this feature:
BLAST of EY711461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CAD8B_ORYSJ1.140e-3167.42Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH6_ARATH3.318e-3166.67Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH3_ARATH2.151e-3069.88Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH2_ARATH2.151e-3069.88Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
MTDH1_STYHU6.258e-3067.47Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CAD8D_ORYSJ6.258e-3071.08Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
MTDH_PETCR2.013e-2879.17Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ORYSJ2.629e-2861.29Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CAD8A_ORYSJ3.434e-2867.47Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH9_ORYSJ1.704e-2760.67Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-A01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711461 ID=EY711461; Name=EY711461; organism=Citrus sinensis; type=EST; length=825bp
TCCCGACCCACGCGTCCGGGACGTCAAACTATGCCAACAAACACCGATAT
CATTAAATTCATTCTGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAA
GAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCGTTCTCTCCCCCT
TTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTA
ACTCACTGTGGGATATGCCATTCAGATCTTCACATGATAAAAAATGAATG
GGGCAATACCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAG
TGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAAGT
GGGAGTAAGGATGCATGGGTGGGATCATGGCCACTTCCTTGGGATAGCTT
GCCCCATTTGACTTGAAAAAACACTGGCCCCCAAAAATTTTTAAAGGACT
CATTGCCCAAACAAGTTCCCCTTGTGGGGAACCCTTCCCTTTATGGGGGG
GCTCTCCCCTGTGAAACTTTTTGGTGGTGGGCCCGAAAAAAAAAACCTTT
TGTGGGGGGGCGCCTTATTTTCTCGGGGAGGGCCCCCCACCCCCTTTGTG
GACCCCNCCGCGGAGCCCCCCCCCCCCCCCGGGGGGGGGGGGAAAACACA
ACAAAAAACCCCGGGGGGGAGAGTATAATATTGGGGACGCGCCCCTCCCC
AATACCCCACACTGGACGCTCCTACCCCGCTCTCCACAGAGGGAGGGGGG
GGGGGGGGGTCCTCGGGTGGCGAGGGGCACAAAAATTACACAAACACAAA
AATTCACTTCCCCCTCACCCAACTA
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