EY711461

Overview
NameEY711461
Unique NameEY711461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.907e-27
Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = 3
Query:   99 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            + A G AA+D+SG LSPF  SRR+TG+ DV  K+  CGICHSDLH IKNEW ++IYP+VPGHEI GVVTEVG  V++FK GD+ G
Sbjct:   14 QQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVG 98          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 8.458e-27
Identity = 56/86 (65.12%), Postives = 63/86 (73.26%), Query Frame = 3
Query:   96 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            P  A G AA+D SG LSP   SRR+TG+ DV  K+ +CGICHSDLH IKNEW N  YP+VPGHEI GVVTE G  V+KFK GDK G
Sbjct:    3 PTAAAGLAARDASGHLSPLTISRRSTGDDDVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVG 88          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.214e-26
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 3
Query:   93 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            H +   GWAA D SG + PF F RR  G  DVT KV +CG+CH+DLH I N+WG T+YP+VPGHEI GVVT+VG+ V+ FKVGD+ G
Sbjct:    7 HTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKYCGMCHTDLHFIHNDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVG 93          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.160e-26
Identity = 52/85 (61.18%), Postives = 67/85 (78.82%), Query Frame = 3
Query:   99 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            K+A GWAA+D SG+LSP+ ++ R TG +DV  KV +CG+CHSDLH +KN+ G + YP+VPGHE+VG V EVG+ VSKFKVGD  G
Sbjct:    8 KSAIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.554e-25
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E  K   GWAA+D SGVLSP+ ++ R TG +DV  KV +CG+CH+DLH +KN+ G + YP+VPGHE+VG V EVG  VSKFKVGD  G
Sbjct:    5 EVEKTTIGWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.061e-25
Identity = 51/89 (57.30%), Postives = 68/89 (76.40%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSGS 356
            E  +   GWAA+D SGVLSP+ +S R TG +D+  KV  CGICHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+ G+
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGT 93          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.061e-25
Identity = 51/89 (57.30%), Postives = 68/89 (76.40%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSGS 356
            E  +   GWAA+D SGVLSP+ +S R TG +D+  KV  CGICHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+ G+
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGT 93          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.061e-25
Identity = 51/89 (57.30%), Postives = 68/89 (76.40%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSGS 356
            E  +   GWAA+D SGVLSP+ +S R TG +D+  KV  CGICHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+ G+
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGT 93          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.916e-25
Identity = 53/85 (62.35%), Postives = 64/85 (75.29%), Query Frame = 3
Query:   99 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            K A GWAA+D SGVLSP+ ++ R+TG  DV  KV  CGICH+D+H IKN+ G + YP+VPGHE+VG V EVGS VSKF VGD  G
Sbjct:    9 KKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVG 93          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.916e-25
Identity = 50/89 (56.18%), Postives = 68/89 (76.40%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSGS 356
            E  +   GWAA+D SGVLSP+ +S R TG +D+  KV  CG+CHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+ G+
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGVCHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGT 93          
The following BLAST results are available for this feature:
BLAST of EY711461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH3_ORYSJ2.907e-2764.71Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH5_ORYSJ8.458e-2765.12Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH6_ORYSJ3.214e-2659.77Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CADH2_TOBAC7.160e-2661.18Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH1_TOBAC3.554e-2559.09Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH_EUCGL6.061e-2557.30Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_EUCBO6.061e-2557.30Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_EUCGU6.061e-2557.30Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH4_ARATH7.916e-2562.35Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH2_EUCGU7.916e-2556.18Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-A01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711461 ID=EY711461; Name=EY711461; organism=Citrus sinensis; type=EST; length=825bp
TCCCGACCCACGCGTCCGGGACGTCAAACTATGCCAACAAACACCGATAT
CATTAAATTCATTCTGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAA
GAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCGTTCTCTCCCCCT
TTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTA
ACTCACTGTGGGATATGCCATTCAGATCTTCACATGATAAAAAATGAATG
GGGCAATACCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAG
TGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAAGT
GGGAGTAAGGATGCATGGGTGGGATCATGGCCACTTCCTTGGGATAGCTT
GCCCCATTTGACTTGAAAAAACACTGGCCCCCAAAAATTTTTAAAGGACT
CATTGCCCAAACAAGTTCCCCTTGTGGGGAACCCTTCCCTTTATGGGGGG
GCTCTCCCCTGTGAAACTTTTTGGTGGTGGGCCCGAAAAAAAAAACCTTT
TGTGGGGGGGCGCCTTATTTTCTCGGGGAGGGCCCCCCACCCCCTTTGTG
GACCCCNCCGCGGAGCCCCCCCCCCCCCCCGGGGGGGGGGGGAAAACACA
ACAAAAAACCCCGGGGGGGAGAGTATAATATTGGGGACGCGCCCCTCCCC
AATACCCCACACTGGACGCTCCTACCCCGCTCTCCACAGAGGGAGGGGGG
GGGGGGGGGTCCTCGGGTGGCGAGGGGCACAAAAATTACACAAACACAAA
AATTCACTTCCCCCTCACCCAACTA
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