EY711461

Overview
NameEY711461
Unique NameEY711461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.034e-24
Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E  +   GWAA+D SGVLSP+ ++ R TG +DV  K+ +CGICH+D+H IKN+ G + YP+VPGHE+VG V EVGS V+KFKVGD  G
Sbjct:    5 EAERKTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.326e-23
Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E  +   GWAA+D SG+LSP+ ++ R TG +DV  ++  CGICH+DLH  KN+ G + YP+VPGHE+VG V EVGS VSKF VGD  G
Sbjct:    5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.326e-23
Identity = 49/88 (55.68%), Postives = 65/88 (73.86%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E  +   GWAA+D SGVLSP+ ++ R TG +DV  +V  CGICH+D+H IKN+ G + YP+VPGHE+VG V EVGS+V+KF+ GD  G
Sbjct:    5 EVERKTVGWAARDPSGVLSPYEYTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.673e-23
Identity = 49/88 (55.68%), Postives = 66/88 (75.00%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E  K   G+AA+D+SG LSP+ ++ R  G +DV  KV +CGICHSDL  ++NE G + YP+VPGHE+VG+VTE+GS+V KFKVG+  G
Sbjct:    5 ESEKTVTGYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.410e-23
Identity = 49/88 (55.68%), Postives = 66/88 (75.00%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E  K   G+AA+D+SG LSP+ ++ R  G +DV  KV +CGICHSDL  ++NE G + YP+VPGHE+VG+VTE+GS+V KFKVG+  G
Sbjct:    5 ETEKTVTGYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.410e-23
Identity = 46/84 (54.76%), Postives = 62/84 (73.81%), Query Frame = 3
Query:  102 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            N   WAA+D SG+LSP+ F+RRA    DV+ ++THCG+C++D+   +N   N++YP+VPGHEI GVVTEVG+ V  FKVGD  G
Sbjct:    9 NCDAWAARDPSGILSPYKFNRRAVQSDDVSLRITHCGVCYADVAWTRNILNNSMYPLVPGHEIAGVVTEVGADVKSFKVGDHVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.677e-23
Identity = 48/88 (54.55%), Postives = 64/88 (72.73%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E  +   GWAA D++G L+P+ +S R TG +DV  KV  CG+CH+D+H IKN+ G + YP+VPGHE+VG V EVGS V++FKVGD  G
Sbjct:    5 ETERKIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.677e-23
Identity = 51/95 (53.68%), Postives = 64/95 (67.37%), Query Frame = 3
Query:   69 MGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            MG     E  K   GWAA+D +G LSP+ ++ R TG +DV  KV +CGICH+DLH  KN  G + YP+VPGHE+VG V EVG +VSK+ VGD  G
Sbjct:    1 MGSVDASE--KTITGWAARDATGHLSPYTYNLRRTGAEDVVLKVLYCGICHTDLHQTKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVG 93          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.156e-22
Identity = 45/84 (53.57%), Postives = 63/84 (75.00%), Query Frame = 3
Query:  102 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            N   WAA+D SG+LSP+ F+RR    +DV+ ++THCG+C++D+   +N + ++IYP+VPGHEI GVVTEVG+ V  FKVGD  G
Sbjct:    9 NCDAWAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.816e-22
Identity = 49/88 (55.68%), Postives = 65/88 (73.86%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E  K   G+AA+D+SG LSP+ ++ R  G +DV  +V +CGICHSDL  + NE G + YP+VPGHE+VGVVTE+GS+V KFKVG+  G
Sbjct:    5 ESEKTVTGYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVG 92          
The following BLAST results are available for this feature:
BLAST of EY711461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH1_ARACO1.034e-2457.95Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH5_ARATH3.326e-2355.68Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH1_OCIBA3.326e-2355.68Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_PINTA5.673e-2355.68Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_PINRA7.410e-2355.68Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH1_ORYSJ7.410e-2354.76Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH_POPDE9.677e-2354.55Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_LOLPR9.677e-2353.68Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH4_ORYSJ2.156e-2253.57Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH2_PICAB2.816e-2255.68Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-A01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711461 ID=EY711461; Name=EY711461; organism=Citrus sinensis; type=EST; length=825bp
TCCCGACCCACGCGTCCGGGACGTCAAACTATGCCAACAAACACCGATAT
CATTAAATTCATTCTGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAA
GAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCGTTCTCTCCCCCT
TTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTA
ACTCACTGTGGGATATGCCATTCAGATCTTCACATGATAAAAAATGAATG
GGGCAATACCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAG
TGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAAGT
GGGAGTAAGGATGCATGGGTGGGATCATGGCCACTTCCTTGGGATAGCTT
GCCCCATTTGACTTGAAAAAACACTGGCCCCCAAAAATTTTTAAAGGACT
CATTGCCCAAACAAGTTCCCCTTGTGGGGAACCCTTCCCTTTATGGGGGG
GCTCTCCCCTGTGAAACTTTTTGGTGGTGGGCCCGAAAAAAAAAACCTTT
TGTGGGGGGGCGCCTTATTTTCTCGGGGAGGGCCCCCCACCCCCTTTGTG
GACCCCNCCGCGGAGCCCCCCCCCCCCCCCGGGGGGGGGGGGAAAACACA
ACAAAAAACCCCGGGGGGGAGAGTATAATATTGGGGACGCGCCCCTCCCC
AATACCCCACACTGGACGCTCCTACCCCGCTCTCCACAGAGGGAGGGGGG
GGGGGGGGGTCCTCGGGTGGCGAGGGGCACAAAAATTACACAAACACAAA
AATTCACTTCCCCCTCACCCAACTA
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