EY711461

Overview
NameEY711461
Unique NameEY711461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.677e-22
Identity = 47/85 (55.29%), Postives = 63/85 (74.12%), Query Frame = 3
Query:   99 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            +   G AAKD SG+L+P+ ++ R TG  DV  K+ +CG+CHSDLH IKN+ G + YP+VPGHE+VG V EVGS V++FKVG+  G
Sbjct:    9 RTTVGLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVG 93          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.273e-22
Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 3
Query:   90 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            E  +   G+AA+D+SG LSP+ ++ R  G +DV  +V +CGICHSDL  + NE G + YP+VPGHE+VGVVTE+GS+V KFKVG+  G
Sbjct:    5 ESERTVTGYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.273e-22
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 3
Query:   99 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            K   GWAA+D SG L+P++++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+  GD  G
Sbjct:    8 KTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.397e-21
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 3
Query:   99 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            +   GWAA+D +G LSP+ ++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD  G
Sbjct:    8 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVAKYGVGDVVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.825e-21
Identity = 44/85 (51.76%), Postives = 62/85 (72.94%), Query Frame = 3
Query:   99 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            +   GWAA+D +G L+P+ ++ R+TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD  G
Sbjct:    8 RKVVGWAARDATGHLAPYTYTLRSTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVG 92          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.001e-19
Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 3
Query:  114 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            WAA+D SG+LSP   +RR+    DV+  +THCG+C++D+   +N+ G++ YP+VPGHEI G+VT+VG  V +FKVGD  G
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVG 93          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.075e-17
Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 3
Query:  141 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            L P   +RR  G  DV  ++ +CG+CHSDLH +++EW  T+YP VPGHEIVG V  VG +V K+  GD  G
Sbjct:   15 LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVG 85          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.768e-16
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3
Query:  114 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            +AA   +  L+    +RR  G  DV   +   GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+ G
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVG 86          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.768e-16
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3
Query:  114 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            +AA   +  L+    +RR  G  DV   +   GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+ G
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVG 86          
BLAST of EY711461 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.211e-14
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 3
Query:  162 RRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKSG 353
            RR     DV   +   GICHSD+H   +EWG  I+P+VPGHEI GVVT VG+KV+K  VGD+ G
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVG 89          
The following BLAST results are available for this feature:
BLAST of EY711461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH_MEDSA3.677e-2255.29Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH7_PICAB6.273e-2254.55Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_ORYSJ6.273e-2252.94Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_MAIZE1.397e-2152.94Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH_SACOF1.825e-2151.76Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH1_ARATH1.001e-1951.25Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
YAHK_ECOLI6.075e-1750.70Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADHC_MYCTU1.768e-1648.75NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO1.768e-1648.75NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU8.211e-1454.69Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-A01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711461 ID=EY711461; Name=EY711461; organism=Citrus sinensis; type=EST; length=825bp
TCCCGACCCACGCGTCCGGGACGTCAAACTATGCCAACAAACACCGATAT
CATTAAATTCATTCTGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAA
GAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCGTTCTCTCCCCCT
TTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTA
ACTCACTGTGGGATATGCCATTCAGATCTTCACATGATAAAAAATGAATG
GGGCAATACCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAG
TGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAAGT
GGGAGTAAGGATGCATGGGTGGGATCATGGCCACTTCCTTGGGATAGCTT
GCCCCATTTGACTTGAAAAAACACTGGCCCCCAAAAATTTTTAAAGGACT
CATTGCCCAAACAAGTTCCCCTTGTGGGGAACCCTTCCCTTTATGGGGGG
GCTCTCCCCTGTGAAACTTTTTGGTGGTGGGCCCGAAAAAAAAAACCTTT
TGTGGGGGGGCGCCTTATTTTCTCGGGGAGGGCCCCCCACCCCCTTTGTG
GACCCCNCCGCGGAGCCCCCCCCCCCCCCCGGGGGGGGGGGGAAAACACA
ACAAAAAACCCCGGGGGGGAGAGTATAATATTGGGGACGCGCCCCTCCCC
AATACCCCACACTGGACGCTCCTACCCCGCTCTCCACAGAGGGAGGGGGG
GGGGGGGGGTCCTCGGGTGGCGAGGGGCACAAAAATTACACAAACACAAA
AATTCACTTCCCCCTCACCCAACTA
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