EY711434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: SHEP_DROGR (Protein alan shepard OS=Drosophila grimshawi GN=shep PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.773e-15 Identity = 50/173 (28.90%), Postives = 81/173 (46.82%), Query Frame = 2 Query: 164 GPNGVAAGAS---GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 673 GPNG A + G Q T+LY+ L TD L ++ +Q G ++S + D +T + GYG+V++ PA A A+ L + + + +DP+ N++I NL L + +G ++S +I D SKG GF + E++E + I NG I Sbjct: 238 GPNGTAQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLINMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAEGAVKGLQAKGVQAQMAK--QQEQDPT-------NLYIANLPPHFKETDLEAMLAKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTI 401
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.773e-15 Identity = 45/164 (27.44%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 218 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSH---------RDPSIRKSGTG------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLN 661 LYVG+L F++T SQL ++F++ G V +V + D T RS G+ +V + +A A+ + + + + +++++ + IR + G +++ NL ++ + L D F+ +S K+ D SG+S+GFGF+ F + E+ +A+D +N Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMN 279
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: SHEP_DROYA (Protein alan shepard OS=Drosophila yakuba GN=shep PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14 Identity = 50/173 (28.90%), Postives = 80/173 (46.24%), Query Frame = 2 Query: 164 GPNGVAAGAS---GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 673 GPNG + G Q T+LY+ L TD L ++ +Q G ++S + D +T + GYG+V++ PA A A+ L + + + +DP+ N++I NL L S +G ++S +I D SKG GF + E++E + I NG I Sbjct: 212 GPNGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAK--QQEQDPT-------NLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTI 375
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: SHEP_DROSE (Protein alan shepard OS=Drosophila sechellia GN=shep PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14 Identity = 50/173 (28.90%), Postives = 80/173 (46.24%), Query Frame = 2 Query: 164 GPNGVAAGAS---GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 673 GPNG + G Q T+LY+ L TD L ++ +Q G ++S + D +T + GYG+V++ PA A A+ L + + + +DP+ N++I NL L S +G ++S +I D SKG GF + E++E + I NG I Sbjct: 212 GPNGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAK--QQEQDPT-------NLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTI 375
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: SHEP_DROME (Protein alan shepard OS=Drosophila melanogaster GN=shep PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14 Identity = 50/173 (28.90%), Postives = 80/173 (46.24%), Query Frame = 2 Query: 164 GPNGVAAGAS---GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 673 GPNG + G Q T+LY+ L TD L ++ +Q G ++S + D +T + GYG+V++ PA A A+ L + + + +DP+ N++I NL L S +G ++S +I D SKG GF + E++E + I NG I Sbjct: 212 GPNGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAK--QQEQDPT-------NLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTI 375
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: SHEP_DROER (Protein alan shepard OS=Drosophila erecta GN=shep PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14 Identity = 50/173 (28.90%), Postives = 80/173 (46.24%), Query Frame = 2 Query: 164 GPNGVAAGAS---GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 673 GPNG + G Q T+LY+ L TD L ++ +Q G ++S + D +T + GYG+V++ PA A A+ L + + + +DP+ N++I NL L S +G ++S +I D SKG GF + E++E + I NG I Sbjct: 212 GPNGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAK--QQEQDPT-------NLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTI 375
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: TIA1_MOUSE (Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14 Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 2 Query: 215 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGN--------------IFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRK 712 +LYVG+L +VT++ + LFSQ+G + ++ D T + Y +V + AA AL +N + K +++ ++ PS +K T + +F+ +L I + + F+ FG I ++ D +G+SKG+GFV F NK A+NAI ++ G + +Q+ RK Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWA-TTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185 HSP 2 Score: 77.0258 bits (188), Expect = 1.668e-13 Identity = 47/172 (27.33%), Postives = 80/172 (46.51%), Query Frame = 2 Query: 218 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKS--------------------GTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 673 ++VGDL +T + F+ G++ RV +D++T +S GYG+V++ N DA A+ + L + IR ++ R P KS ++ + + + + TFS FG I+ ++ D KG+ FV+F + ESA +AI +NG I Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD-----KGYSFVRFSSHESAAHAIVSVNGTTI 274
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: TIA1_HUMAN (Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14 Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 2 Query: 215 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGN--------------IFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVVVGHFLRK 712 +LYVG+L +VT++ + LFSQ+G + ++ D T + Y +V + AA AL +N + K +++ ++ PS +K T + +F+ +L I + + F+ FG I ++ D +G+SKG+GFV F NK A+NAI ++ G + +Q+ RK Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWA-TTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185 HSP 2 Score: 77.0258 bits (188), Expect = 1.668e-13 Identity = 47/172 (27.33%), Postives = 80/172 (46.51%), Query Frame = 2 Query: 218 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKS--------------------GTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 673 ++VGDL +T + F+ G++ RV +D++T +S GYG+V++ N DA A+ + L + IR ++ R P KS ++ + + + + TFS FG I+ ++ D KG+ FV+F + ESA +AI +NG I Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD-----KGYSFVRFNSHESAAHAIVSVNGTTI 274
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: FCA_ARATH (Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14 Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 2 Query: 209 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVL-NFTPLNNKSIRIMYSHRDPSIRKSGT--GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNG 664 T L+VG + T+ ++ F Q G VL V + +D T + G +V YA DA RA+ L N L + + + D + GT +F+ +L+K K + + F FG++ + D QS+G GFV++ +KE+A AID LNG Sbjct: 119 TVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNG 273
BLAST of EY711434 vs. ExPASy Swiss-Prot
Match: SHEP_DROAN (Protein alan shepard OS=Drosophila ananassae GN=shep PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14 Identity = 51/175 (29.14%), Postives = 81/175 (46.29%), Query Frame = 2 Query: 164 GPNGVAAGAS---GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNK--SIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI 673 GPNG A + G Q T+LY+ L TD L ++ +Q G ++S + D +T + YG+V++ PA A A+ L + + + I HR ++ N++I NL L S +G ++S +I D SKG GF + E++E + I NG I Sbjct: 217 GPNGTAQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKC--YGFVDFEQPAFAECAVKGLQGKGVQAQMAKVGIWVLHRPAIQQEQDPTNLYIANLPPHYKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTI 389 The following BLAST results are available for this feature:
BLAST of EY711434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711434 ID=EY711434; Name=EY711434; organism=Citrus sinensis; type=EST; length=927bpback to top |