EY711380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.457e-29 Identity = 62/116 (53.45%), Postives = 85/116 (73.28%), Query Frame = 3 Query: 207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGR-LKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 551 IGW+YG+VTED++TG++MH +GWRS YC AF G+APINL++RL QVLRW+ GS+EI FSR+ P+ +G L L+R AY+N T YP TA+ L+ Y T+PA+ +T FI+ Sbjct: 626 IGWVYGTVTEDVVTGYRMHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIFFSRNNPL---FGSTFLHPLQRVAYINITTYPFTALFLIFYTTVPALSFVTGHFIV 738
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.083e-27 Identity = 53/108 (49.07%), Postives = 82/108 (75.93%), Query Frame = 3 Query: 207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCL 530 +GW+Y TED++TGF++H +GWRS+YC + AF+G+APINL++RL Q+LRW+ GS+E+ FSR+CP+ G RL+ ++R AY N T YP++A+ +++Y LP + L Sbjct: 555 VGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAGC--RLRPMQRVAYANMTAYPVSALFMVVYDLLPVIWL 660
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.701e-26 Identity = 54/122 (44.26%), Postives = 88/122 (72.13%), Query Frame = 3 Query: 207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHY 572 +G+IY TEDI+TGF++H +GWRS+YC + AF G+APINL++RL+Q++RW+ GS+E+ FS + P+ G RL+ L+R +Y+N TIYP+T++ +L+Y P + L+ ++ + + F Y Sbjct: 563 VGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLI--GGRRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYIQRPFTRY 682
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.701e-26 Identity = 54/122 (44.26%), Postives = 88/122 (72.13%), Query Frame = 3 Query: 207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHY 572 +G+IY TEDI+TGF++H +GWRS+YC + AF G+APINL++RL+Q++RW+ GS+E+ FS + P+ G RL+ L+R +Y+N TIYP+T++ +L+Y P + L+ ++ + + F Y Sbjct: 563 VGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLI--GGRRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYIQRPFTRY 682
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.264e-24 Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSR-HCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHYN 575 +IGW+YG + TGF+MHARGW S YC P RPAF+ A + +D L R A+ ++ IL SR H P+W G RL L+R YV YPL ++PL +YC LPAVCLLT K P ++Y+ Sbjct: 540 EIGWMYGG---GVATGFRMHARGWSSAYCSPARPAFRRYARASPADVLAGASRRAVAAMGILLSRRHSPVWAGR--RLGLLQRLGYVARASYPLASLPLTVYCALPAVCLLTGKSTFPSDVSYYD 659
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.677e-24 Identity = 50/122 (40.98%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHY 572 +GW+Y TED++TGF+MH +GWRS+Y + AF+G+APINL++RL Q+LRW+ GS+E+ FS + G RL L+R AY+N + YP+ + + Y P + L++ ++ + + F Y Sbjct: 569 VGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALL--AGRRLHPLQRVAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQRPFGEY 688
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.677e-24 Identity = 50/122 (40.98%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHY 572 +GW+Y TED++TGF+MH +GWRS+Y + AF+G+APINL++RL Q+LRW+ GS+E+ FS + G RL L+R AY+N + YP+ + + Y P + L++ ++ + + F Y Sbjct: 539 VGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALL--AGRRLHPLQRVAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQRPFGEY 658
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.272e-24 Identity = 51/121 (42.15%), Postives = 78/121 (64.46%), Query Frame = 3 Query: 210 GWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQVFNHY 572 GW+Y TED+ TGF+MH +GWRS+Y + AF+G+APINL++RL Q+LRW+ GS+E+ FS + G RL L+R AY+N + YP+ + + Y P + L++ ++ + Q F Y Sbjct: 579 GWVYDIATEDVATGFRMHQQGWRSVYTSMEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALL--AGRRLHPLQRIAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQQPFGEY 697
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 5.870e-22 Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 3 Query: 207 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQ 557 IGW+Y SV ED+ T +H+RGW S Y P PAF GS P + + L Q RWA G +EILF++ P+ + +++F +R AY+ I L +IP L+YC LPA CLL N + P+ Sbjct: 452 IGWLYDSVAEDLNTSIGIHSRGWTSSYISPDTPAFLGSMPAGVPEALLQQRRWATGWIEILFNKQSPLRGLFSKKIRFRQRLAYL-CIITCLRSIPELIYCLLPAYCLLHNSTLFPK 567
BLAST of EY711380 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 7.667e-22 Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 204 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQ 557 ++GW+YGS+TEDILTG ++HA GWRS+ + + PAF GSAPI L Q RWA G EI+ SR+ PI RLKF + AY+ +PL A L Y L C+LTN+ +P+ Sbjct: 459 EVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFELCYGLLGPYCILTNQSFLPK 576 The following BLAST results are available for this feature:
BLAST of EY711380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711380 ID=EY711380; Name=EY711380; organism=Citrus sinensis; type=EST; length=942bpback to top |