EY711314

Overview
NameEY711314
Unique NameEY711314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length333
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALPK (Multidrug resistance protein mdtC OS=Salmonella paratyphi A (strain AKU_12601) GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALPB (Multidrug resistance protein mdtC OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALPA (Multidrug resistance protein mdtC OS=Salmonella paratyphi A GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALNS (Multidrug resistance protein mdtC OS=Salmonella newport (strain SL254) GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALHS (Multidrug resistance protein mdtC OS=Salmonella heidelberg (strain SL476) GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALG2 (Multidrug resistance protein mdtC OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALEP (Multidrug resistance protein mdtC OS=Salmonella enteritidis PT4 (strain P125109) GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALDC (Multidrug resistance protein mdtC OS=Salmonella dublin (strain CT_02021853) GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALA4 (Multidrug resistance protein mdtC OS=Salmonella agona (strain SL483) GN=mdtC PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.557e-23
Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_CITK8 (Multidrug resistance protein mdtC OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdtC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.460e-22
Identity = 50/108 (46.30%), Postives = 78/108 (72.22%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+  LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIREKLPELQTLIPASIDLQIAQDRSPTIRASLEEVEQTLVISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTF 374
The following BLAST results are available for this feature:
BLAST of EY711314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
MDTC_SALPK8.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella pa... [more]
MDTC_SALPB8.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella pa... [more]
MDTC_SALPA8.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella pa... [more]
MDTC_SALNS8.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella ne... [more]
MDTC_SALHS8.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella he... [more]
MDTC_SALG28.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella ga... [more]
MDTC_SALEP8.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella en... [more]
MDTC_SALDC8.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella du... [more]
MDTC_SALA48.557e-2347.22Multidrug resistance protein mdtC OS=Salmonella ag... [more]
MDTC_CITK81.460e-2246.30Multidrug resistance protein mdtC OS=Citrobacter k... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-C09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711314 ID=EY711314; Name=EY711314; organism=Citrus sinensis; type=EST; length=333bp
GCGCCGAGAACGAACGCCTTGCGGCCTGGGCCAATGAAAACCAGGCGGTC
TTGCTGAACATTCAGCGCCAGCCCGGGGCCAACGTCATCGAAGTGGTGGA
CCGGATCAAGGCATTGTTGCCGAGCATCACCGACAACCTGCCGGCCGGCC
TGGACGTGACGGTGCTCACTGACCGGACCCAGACCATCCGGGCCTCGGTC
AAGGACGTACAACATGAATTGCTGATCGCCATTGCCCTGGTGGTGATGGT
GACGTTCCTGTTCCTGCGCCGCTTCAGCGCGACCATCATCCCGTCCATTG
CCGTGCCACTGTCCCTGGTGGGCACCTTTGGCG
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