EY711314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SALAR (Multidrug resistance protein mdtC OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=mdtC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.461e-22 Identity = 49/108 (45.37%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P N+I+ VD I+A LP + +PA +D+ + DR+ TIRAS+++V+ L I++ALV++V FLFLR AT+IP++AVP+SL+ TF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPETNIIQTVDSIRAKLPELQAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLISTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ERWT9 (Multidrug resistance protein mdtC OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=mdtC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.614e-21 Identity = 49/108 (45.37%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A +N AVLL I++ P AN+I+ VDRI+ +P + + LPA + + + D ++TIRAS+ +V+ L I++ LVV+V F FLR AT+IP++AVP+SL+GTF Sbjct: 267 QDVRNAGMSNARPAVLLVIRKSPQANIIDTVDRIRGEVPELRNTLPASIGLDIAQDSSRTIRASLHEVEQSLAISVGLVVLVVFAFLRSGRATLIPAVAVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: BEPE_BRUSU (Efflux pump membrane transporter bepE OS=Brucella suis GN=bepE PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.041e-16 Identity = 41/99 (41.41%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 33 NENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 N AV + I QPGAN + ++ I+ + + + PAG+D + D T+ I+ S+++V H + AI LVV+V F+FL+ + AT+IP IAVP+S++GTF Sbjct: 284 NGTPAVPIAIYLQPGANALNTMELIQNRMNELKASFPAGIDYAIPFDTTKFIKVSIEEVVHTFIEAIILVVLVVFIFLQNWRATLIPVIAVPISIIGTF 382
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: BEPG_BRUSU (Efflux pump membrane transporter bepG OS=Brucella suis GN=bepG PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.463e-14 Identity = 36/99 (36.36%), Postives = 62/99 (62.63%), Query Frame = 3 Query: 33 NENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 N A ++ + + PG+N + + ++ ++ + + PAGLD + D T + +++ +V LL A LVV+V F+FL F AT+IP++AVP+SL+GTF Sbjct: 284 NGKPASVIAVYQAPGSNAVAAAEGVRNVMEQLKQSFPAGLDYKITYDTTVFVSSTIHEVIKTLLEAFVLVVVVVFIFLGNFRATLIPTLAVPVSLIGTF 382
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: TTGH_PSEPU (Toluene efflux pump membrane transporter ttgH OS=Pseudomonas putida GN=ttgH PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.483e-14 Identity = 38/109 (34.86%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 A++ ++A ++ L ++ G N++E VD +K L+ LP G++V D T + AS++ V H + A+ LV +V +LFL+ F AT+IP++AVP+ L+ TF Sbjct: 272 ADSFAISAQYKDSPTASLALRLSTGGNLLETVDAVKKLMEQQKAYLPDGVEVIYPYDTTPVVEASIESVVHTIFEAVVLVFLVMYLFLQSFRATLIPTLAVPVVLLATF 380
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: SRPB_PSEPU (Solvent-resistant pump membrane transporter srpB OS=Pseudomonas putida GN=srpB PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.483e-14 Identity = 38/109 (34.86%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 A++ ++A ++ L ++ G N++E VD +K L+ LP G++V D T + AS++ V H + A+ LV +V +LFL+ F AT+IP++AVP+ L+ TF Sbjct: 272 ADSFAISAQYKDSPTASLALRLSTGGNLLETVDAVKKLMEQQKAYLPDGVEVIYPYDTTPVVEASIESVVHTIFEAVVLVFLVMYLFLQSFRATLIPTLAVPVVLLATF 380
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: ACRD_ECOLI (Probable aminoglycoside efflux pump OS=Escherichia coli (strain K12) GN=acrD PE=3 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 6.146e-13 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 33 NENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 N A L ++ GAN + + + L + P GL+ V + T ++AS++DV LL AIALV +V +LFL+ F AT+IP+IAVP+ L+GTF Sbjct: 282 NGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTF 380
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: ACRB_ECOLI (Acriflavine resistance protein B OS=Escherichia coli (strain K12) GN=acrB PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.027e-13 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 EN + A N A L I+ GAN ++ I+A L + P+GL + D T ++ S+ +V L+ AI LV +V +LFL+ F AT+IP+IAVP+ L+GTF Sbjct: 273 ENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTF 380
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: ACRF_ECOLI (Acriflavine resistance protein F OS=Escherichia coli (strain K12) GN=acrF PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.369e-12 Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 EN + A N A L I+ GAN ++ IKA L + P G+ V D T ++ S+ +V L AI LV +V +LFL+ AT+IP+IAVP+ L+GTF Sbjct: 273 ENYNVIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTF 380
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: SEPB_PSEP1 (Probable efflux pump membrane transporter sepB OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=sepB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.984e-12 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 +EN ++A + L ++ G N++E V +KA L LP G++V D + + AS+ V H +L A+ LV +V FLFL+ ATIIP++AVP+ L+ F Sbjct: 272 SENFAISAKYRGQDSAGLGLRLASGGNLLETVKAVKAELEKQKAYLPEGVEVIYPYDTSPVVEASIDSVVHTILEAVVLVFLVMFLFLQSLRATIIPTLAVPVVLLAAF 380 The following BLAST results are available for this feature:
BLAST of EY711314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711314 ID=EY711314; Name=EY711314; organism=Citrus sinensis; type=EST; length=333bpback to top |