EY711314

Overview
NameEY711314
Unique NameEY711314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length333
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_YERPB (Multidrug resistance protein mdtC OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mdtC PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 53/108 (49.07%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A  +    AVLL I R+PGAN+I  VDRI+A LP++  ++PA + + +  DR+ TIRAS+ +V+  L+IA+ALV++V F+FLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMSAGQPAVLLVISREPGANIIATVDRIRAELPALRASIPASIQLNIAQDRSPTIRASLDEVERSLVIAVALVILVVFIFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_YERPA (Multidrug resistance protein mdtC OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mdtC PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 53/108 (49.07%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A  +    AVLL I R+PGAN+I  VDRI+A LP++  ++PA + + +  DR+ TIRAS+ +V+  L+IA+ALV++V F+FLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMSAGQPAVLLVISREPGANIIATVDRIRAELPALRASIPASIQLNIAQDRSPTIRASLDEVERSLVIAVALVILVVFIFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_YERP3 (Multidrug resistance protein mdtC OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mdtC PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 53/108 (49.07%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A  +    AVLL I R+PGAN+I  VDRI+A LP++  ++PA + + +  DR+ TIRAS+ +V+  L+IA+ALV++V F+FLR   AT+IP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMSAGQPAVLLVISREPGANIIATVDRIRAELPALRASIPASIQLNIAQDRSPTIRASLDEVERSLVIAVALVILVVFIFLRSGRATLIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECOUT (Multidrug resistance protein mdtC OS=Escherichia coli (strain UTI89 / UPEC) GN=mdtC PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECOSM (Multidrug resistance protein mdtC OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=mdtC PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECOL6 (Multidrug resistance protein mdtC OS=Escherichia coli O6 GN=mdtC PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECOL5 (Multidrug resistance protein mdtC OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=mdtC PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECOK1 (Multidrug resistance protein mdtC OS=Escherichia coli O1:K1 / APEC GN=mdtC PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECO7I (Multidrug resistance protein mdtC OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=mdtC PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
[Close]
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECO45 (Multidrug resistance protein mdtC OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=mdtC PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 
Query:    6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            ++ R A   N   A+LL I++ P AN+I+ VD I+A LP +   +PA +D+ +  DR+ TIRAS+++V+  L+I++ALV++V FLFLR   ATIIP++AVP+SL+GTF
Sbjct:  267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
The following BLAST results are available for this feature:
BLAST of EY711314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
MDTC_YERPB5.926e-2449.07Multidrug resistance protein mdtC OS=Yersinia pseu... [more]
MDTC_YERPA5.926e-2449.07Multidrug resistance protein mdtC OS=Yersinia pest... [more]
MDTC_YERP35.926e-2449.07Multidrug resistance protein mdtC OS=Yersinia pseu... [more]
MDTC_ECOUT5.926e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECOSM5.926e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECOL65.926e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECOL55.926e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECOK15.926e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECO7I5.926e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]
MDTC_ECO455.926e-2448.15Multidrug resistance protein mdtC OS=Escherichia c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-C09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711314 ID=EY711314; Name=EY711314; organism=Citrus sinensis; type=EST; length=333bp
GCGCCGAGAACGAACGCCTTGCGGCCTGGGCCAATGAAAACCAGGCGGTC
TTGCTGAACATTCAGCGCCAGCCCGGGGCCAACGTCATCGAAGTGGTGGA
CCGGATCAAGGCATTGTTGCCGAGCATCACCGACAACCTGCCGGCCGGCC
TGGACGTGACGGTGCTCACTGACCGGACCCAGACCATCCGGGCCTCGGTC
AAGGACGTACAACATGAATTGCTGATCGCCATTGCCCTGGTGGTGATGGT
GACGTTCCTGTTCCTGCGCCGCTTCAGCGCGACCATCATCCCGTCCATTG
CCGTGCCACTGTCCCTGGTGGGCACCTTTGGCG
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