EY711314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECO27 (Multidrug resistance protein mdtC OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=mdtC PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24 Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP++AVP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_SHISS (Multidrug resistance protein mdtC OS=Shigella sonnei (strain Ss046) GN=mdtC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 51/108 (47.22%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP+++VP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_PHOLL (Multidrug resistance protein mdtC OS=Photorhabdus luminescens subsp. laumondii GN=mdtC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 54/108 (50.00%), Postives = 79/108 (73.15%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 +N R A + A+LL I+R+ GAN+I V+RI+ LP++ +++PA + + V DRT TIRAS+ +V+ L+IAI LV++V FLFLR AT+IP+IAVP+SL+GTF Sbjct: 267 QNVRAAGMSGGEPAILLIIRREAGANIIATVNRIREQLPALHESIPASIQLKVAQDRTPTIRASIVEVERALVIAIGLVILVVFLFLRSGRATLIPAIAVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_PECCP (Multidrug resistance protein mdtC OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mdtC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 54/108 (50.00%), Postives = 77/108 (71.30%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 +N R A AN A+L+ I+R P AN+I VD I+A +P + +LPA + + V DR+ TIRAS+ +V+ L+IA+ALV++V FLFLR AT IP++AVP+SL+GTF Sbjct: 267 QNSRNAGMANAKPAILVMIRRAPDANIITTVDNIRAAMPELRASLPAEIQLDVAQDRSPTIRASLAEVEQSLVIAVALVILVVFLFLRSGRATAIPALAVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECOLI (Multidrug resistance protein mdtC OS=Escherichia coli (strain K12) GN=mdtC PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 51/108 (47.22%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP+++VP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECOLC (Multidrug resistance protein mdtC OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=mdtC PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 51/108 (47.22%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP+++VP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECOHS (Multidrug resistance protein mdtC OS=Escherichia coli O9:H4 (strain HS) GN=mdtC PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 51/108 (47.22%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP+++VP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECODH (Multidrug resistance protein mdtC OS=Escherichia coli (strain K12 / DH10B) GN=mdtC PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 51/108 (47.22%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP+++VP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECOBW (Multidrug resistance protein mdtC OS=Escherichia coli (strain K12 / BW2952) GN=mdtC PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 51/108 (47.22%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP+++VP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTF 374
BLAST of EY711314 vs. ExPASy Swiss-Prot
Match: MDTC_ECO81 (Multidrug resistance protein mdtC OS=Escherichia coli O81 (strain ED1a) GN=mdtC PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.739e-24 Identity = 52/108 (48.15%), Postives = 79/108 (73.15%), Query Frame = 3 Query: 6 ENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329 ++ R A N A+LL I++ P AN+I+ VD I+A LP + +PA +D+ + DR+ TIRAS+++V+ L+I++ALV++V FLFLR ATIIP++AVP+SL+GTF Sbjct: 267 QDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRARLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLVISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTF 374 The following BLAST results are available for this feature:
BLAST of EY711314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711314 ID=EY711314; Name=EY711314; organism=Citrus sinensis; type=EST; length=333bpback to top |