EY711299

Overview
NameEY711299
Unique NameEY711299
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: ASTD_HAHCH (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Hahella chejuensis (strain KCTC 2396) GN=astD PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.456e-22
Identity = 78/245 (31.84%), Postives = 119/245 (48.57%), Query Frame = 3
Query:   18 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNV-XELAAKATLASTLELXGKSPII 749
            A  G  F   DP T + +   A    + + +AV  AR+AF    W ++    R  I+ R A+L+E++ E LA +      KP  ++      MV ++      + ++  G++       H    H P GV     P+NFP  L    + PAL  GNTIV K +E TP  A    +++ +AGLP GVLN+V G   T G ALA++  +D L FTG   TG ++  +   +      LE+ G +P+I
Sbjct:   15 AGGGVEFESLDPVTQDCLWKGAAASDDVVGQAVQAARQAFTS--WGRLDVSRRIDIVKRFAELLEEDKERLADVIGKETSKPLWEARTEVASMVAKVGISIQAFNERT-GVSEQDVAAGHAVLKHRPHGVLAVFGPYNFPGHLPNGHIVPALIAGNTIVFKPSELTPWFAEETVRIWAKAGLPDGVLNLVQGARET-GVALAANDGIDGLLFTGSSPTGHSLHRQFGGRPEKILALEMGGNNPLI 255          
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: ROCA_BACSU (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus subtilis GN=rocA PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.902e-22
Identity = 68/214 (31.78%), Postives = 104/214 (48.60%), Query Frame = 3
Query:   63 EVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI-HGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNVXELAAK 701
            E+I   +  D E  ++A+  A +AFD   W K  P  R+ I+ +AA ++ +   E ++      GKP+ ++  ++    +  L +YA    K+  G  V        Q  +E +GV   I P+NFP+ +       A+  GNTI+LK A+  P+ A    ++  EAGLP GVLN + G G   G  L  H     +SFTG    G  + E AAK
Sbjct:   62 EIIGYASTADQELAEKAMQAALQAFDS--WKKQRPEHRANILFKAAAILRRRKHEFSSYLVKEAGKPWKEA-DADTAEAIDFLEFYARQMLKLKEGAPVKSRAGEVNQYHYEALGVGIVISPFNFPLAIMAGTAVAAIVTGNTILLKPADAAPVVAAKFVEVMEEAGLPNGVLNYIPGDGAEIGDFLVEHPKTRFVSFTGSRAVGCRIYERAAK 272          
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: ASTD_CITK8 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=astD PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.484e-22
Identity = 78/239 (32.64%), Postives = 120/239 (50.21%), Query Frame = 3
Query:   48 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMV----VRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNV-XELAAKATLASTLELXGKSPII 749
            +P   EV+   ++ DA  +  A   AR AF    W ++    R  I+ + A L+E +  EL A+     GKP  ++      M+    + +  Y+A   ++   L    DG   ++  H P GV     P+NFP  L    + PAL  GNT++ K +E TP T   + KL+ +AGLPPGVLN+V G G   G AL++   +D L FTG  +TG  +  +L+ +      LE+ G +P+I
Sbjct:   21 NPVNGEVLWQGSDADATQVAEAGRAARAAFPT--WARLPFAARQAIVEKFAALLEVHKAELTAIIARETGKPCWEAATEVTAMINKIAISVKAYHARTGEQQSELP---DGAATLR--HRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTLIFKPSELTPWTGEAVMKLWQQAGLPPGVLNLVQG-GRETGQALSALDALDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLI 251          
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: ASTD_PSEPF (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=astD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.245e-22
Identity = 75/246 (30.49%), Postives = 122/246 (49.59%), Query Frame = 3
Query:   18 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNV-XELAAKATLASTLELXGKSPII 749
            A  G+ F   +P T +V+ +     A  ++ AV  AR+AF    W + T  +R  ++   A  ++ + +ELA       GKP  ++      MV ++      + ++    + P GD    ++  H+P GV     P+NFP  L    + PAL  GN+++ K +E TP  A    K + EAGLP GVLN++ G   T G ALA++  +D L FTG   TG ++  + A +      LE+ G +P++
Sbjct:   12 AGQGEAFQSLNPVTQQVLWSGEGATAAQVESAVQAARQAFPG--WARRTLEDRISVLEAFAAALKNHADELARTIGEETGKPLWEAATEVTSMVNKIAISVQSYRERTGEKSGPLGDATAVLR--HKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNSVLFKPSELTPKVAELTVKCWIEAGLPAGVLNLLQGARET-GIALAANPGIDGLFFTGSSRTGNHLHQQFAGRPDKILALEMGGNNPLV 252          
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: ASTD_CHRVO (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Chromobacterium violaceum GN=astD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.245e-22
Identity = 76/245 (31.02%), Postives = 114/245 (46.53%), Query Frame = 3
Query:   18 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNV-XELAAKATLASTLELXGKSPII 749
            A  G+     +P     +       A  +D AV  AR AF    W +M   ER++++ R  + + +   ELA +     GKP  ++      MV ++       A++  G      G+      H+P GV     P+NFP  L    + PAL  GN+++ K +E TP TA    KL+ EAGLP GV+ +V G   T G ALA H  +D L FTG   TG  +  + + +      LE+ G +P+I
Sbjct:   12 AGDGEAMAKTNPADNAPLWQGRAASAAQVDAAVRAARAAFPA--WARMGLEERAKVVRRFGERLTERKAELARVIAQETGKPLWEATTEVTTMVGKIDISLKALAERT-GERAAAMGDAQAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNSVIFKPSELTPWTAEETVKLWAEAGLPAGVIGLVQGAKDT-GVALAGHEGLDGLFFTGSSATGALLHKQFSGRPDKILALEMGGNNPLI 252          
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: ALDH5_BACSU (Putative aldehyde dehydrogenase yfmT OS=Bacillus subtilis GN=yfmT PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.245e-22
Identity = 76/237 (32.07%), Postives = 114/237 (48.10%), Query Frame = 3
Query:   48 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG--DGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLT-ALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNVXELAAKATLASTLELXGKSPII 749
            +P T +      +  A+D+D A   A  A  +  W  + P+E+  I+ +A   IE+N E +  L     G   +++   E+ +V  ++   A +  ++ G  +P   DG  + +    P GV G I P+NFP  L    VAPAL  GN +VLK  E+TP+     +AK+F  AG+P G+LNVV       G +   H     +SFTG    G  + +LA K      LEL G S  I
Sbjct:   29 NPYTQKTFTTFRKATADDVDEAYRAA--ALAKKKWDAVNPFEKRTILEKAVTYIEENEEAIIYLIMEELGGTRLKAA-FEIGLVKNIIKEAATFPIRMEGKILPSTIDGKEN-RLYRVPAGVVGVISPFNFPFFLSMKSVAPALGAGNGVVLKPHEETPICGGTLIAKIFENAGIPAGLLNVVVTDIAEIGDSFVEHPVPRIISFTGSTKVGSYIGQLAMKHFKKPLLELGGNSAFI 261          
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: ASTD_PSEA6 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=astD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.534e-22
Identity = 81/246 (32.93%), Postives = 118/246 (47.97%), Query Frame = 3
Query:   18 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNVXE-LAAKATLASTLELXGKSPII 749
            A  G      DP     I       +E +++AV++ARKA     W   T  +R   + R  +L+ +N + LA       GKP  ++      M+ ++      + ++   +  P   G   I+  H+P GV     P+NFP  L    + PAL  GN IV K ++ TPL A    +L+ +AGLP GVLN+V G   T G ALA+H D+D L FTG   TGK + E  A        LE+ G +P+I
Sbjct:   14 AGQGHDIESIDPAKKRQIWQAKSASSEQVNQAVSSARKA--TVTWAACTFEQRLAYVKRFGELLAENKDMLALTIAQETGKPLWETATEVGAMMGKIGISERAYQERTGLVENPMPVGKAFIR--HKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCIVFKPSDLTPLVAERTVQLWEKAGLPKGVLNLVQGEVET-GKALAAHPDLDGLFFTGSSRTGKILHEQYAGHPGKILALEMGGNNPLI 254          
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: ASTD_ESCF3 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=astD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.534e-22
Identity = 75/241 (31.12%), Postives = 122/241 (50.62%), Query Frame = 3
Query:   48 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY------VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNV-XELAAKATLASTLELXGKSPII 749
            +P + E++    + DA  + +A   AR AF    W +++  +R   + R A L+E N  EL A+     GKP       V ++ +++ + ++  H   G        +   DG   ++  H P GV     P+NFP  L    + PAL  GNT++ K +E TP +   + +L+ +AGLP GVLN+V G G   G AL++  D+D L FTG  +TG  +  +L+ +      LE+ G +P+I
Sbjct:   21 NPVSGELLWQGNDADAAQVGQACRAARAAFPR--WARLSFGDRQVRVERFAGLLESNKVELTAIIARETGKPRWEAATEVTAMINKIAISIKAYHVRTG-----EQRSEMPDGAASLR--HRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTVIFKPSELTPWSGEAVMRLWQQAGLPSGVLNLVQG-GRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLI 251          
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: ASTD1_SHEDO (N-succinylglutamate 5-semialdehyde dehydrogenase 1 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=astD1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.534e-22
Identity = 80/245 (32.65%), Postives = 117/245 (47.76%), Query Frame = 3
Query:   18 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNV-XELAAKATLASTLELXGKSPII 749
            A  G +F   +P   EVI      DA  +D A+ +AR AF    W  M+  ER  I+   A+ ++++ E  A       GK   +S      M  ++       A++   +  P  G       H+P GV     P+NFP  L    + PAL  GNT++ K +E TP  A    +L+ +AGLP GVLN++ G   T G ALASH  +D L FTG  +TG  +  + A +      LE+ G +P+I
Sbjct:   22 AGKGPSFSSVNPANGEVIWQGLGADAGQVDAAITSARAAFYT--WSAMSLTERLVIVEAFAEQLKEHAELFARTIALETGKALWESRTEVGAMTGKIAISIKANAERTGTVENPMPGAKAF-IRHKPHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVLFKPSELTPKVAELTMQLWQQAGLPNGVLNLLQGEIAT-GKALASHKGIDGLFFTGSSNTGHLLHQQYAGQPGKILALEMGGNNPLI 262          
BLAST of EY711299 vs. ExPASy Swiss-Prot
Match: MMSA_CAEEL (Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Caenorhabditis elegans GN=alh-8 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.228e-22
Identity = 70/221 (31.67%), Postives = 115/221 (52.04%), Query Frame = 3
Query:   48 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKNVXELAAK 701
            +P T EVIA V      ++  AV +A+ AF+   W   +P  R + M +   LI+++M++LA   T   GK  +   + +V   ++++ +       + G T+P    D + H   +  P+GV   I P+NFP ++  W    ALA GNT+V+K +EQ P  A  L +L  EAG+P G +N++ G   +A   +  + D+  +SF G    GK++ E  AK
Sbjct:   51 NPATNEVIAMVPNATQAEMQAAVDSAKNAFNT--WKNTSPLTRQQCMFKLQALIKRDMKKLAESITIEQGKT-LPDAEGDVSRGLQVVEHACSVPSLMMGETLPNVSRDMDTHSYRI--PLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAAQLLVELAKEAGVPDGCVNIIHGQ-HSAVNFICDNPDIKAISFVGGDAAGKHIYERGAK 265          
The following BLAST results are available for this feature:
BLAST of EY711299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ASTD_HAHCH1.456e-2231.84N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ROCA_BACSU1.902e-2231.781-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ASTD_CITK82.484e-2232.64N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_PSEPF3.245e-2230.49N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_CHRVO3.245e-2231.02N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ALDH5_BACSU3.245e-2232.07Putative aldehyde dehydrogenase yfmT OS=Bacillus s... [more]
ASTD_PSEA65.534e-2232.93N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_ESCF35.534e-2231.12N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD1_SHEDO5.534e-2232.65N-succinylglutamate 5-semialdehyde dehydrogenase 1... [more]
MMSA_CAEEL7.228e-2231.67Probable methylmalonate-semialdehyde dehydrogenase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-006-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711299 ID=EY711299; Name=EY711299; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGGTAGACGCAGCATCAGGCAAAACATTTCCGGTCTACGAC
CCTCGTACTGCTGAAGTGATTGCTAATGTTGCTGAAGGAGATGCGGAAGA
TATTGACCGTGCAGTTGCTACTGCTCGCAAGGCATTTGATGAGGGACCTT
GGCCAAAGATGACCCCTTATGAGAGGTCAAGGATTATGTTGCGGGCTGCT
GATTTGATTGAGAAAAACATGGAGGAGCTGGCAGCTTTGGAGACATGGAA
CAATGGAAAGCCCTATGTACAATCTCTCAAATCTGAAGTACCAATGGTGG
TTCGCCTGTTGCACTATTATGCTGGCTGGGCTGATAAAATCCATGGACTA
ACTGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACCAAT
TGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTGTTCTCTTGTTTA
CTTGGAAAGTAGCGCCTGCACTAGCTTGTGGTAATACTATTGTTCTAAAG
TCTGCTGAGCAAACGCCTTTGACTGCTCTGTATTTGGCAAAGCTATTCCA
TGAGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTC
CAACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCT
TTTACAGGACACTGTGATACTGGTAAGAATGTTCANGAATTGGCTGCAAA
AGCAACCTTAGCCAGTACCTTAGAACTTGNAGGGAAATCACCNATTATAT
ATCNATGATGCTGNATGTGACCAGCTGTGGAACTGCACACTTTGCTTTNG
TCTATATCAAGGACATGGTGCTGTGCTGGATCTCGNACTTATGACTGAGC
GGTATATGACGAGTTGAAAAAAAGCAAGGCCCTGGCTATGGGCGTATTGT
TGCG
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