EY711154

Overview
NameEY711154
Unique NameEY711154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSJ (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. japonica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEGKNTELPVVNKTLSQEPPQISEP 323
            P ++  +A+DL L PRQVA+WFQNRRARWKTKQ+E+D+  L++ +++L+ + D L ++K+ L AE+  L D++  +     + +L  V     Q PP    P
Sbjct:   89 PERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRVDGQ----MSVKLEAVAADEHQPPPPPPPP 186          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 41/102 (40.20%), Postives = 65/102 (63.73%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEGKNTELPVVNKTLSQEPPQISEP 323
            P ++  +A+DL L PRQVA+WFQNRRARWKTKQ+E+D+  L++ +++L+ + D L ++K+ L AE+  L D++  +     + +L  V     Q PP    P
Sbjct:   65 PERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRVDGQ----MSVKLEAVAADEHQPPPPPPPP 162          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 40/79 (50.63%), Postives = 58/79 (73.42%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKE 254
            PR++  LA++LGLQPRQVAIWFQN+RARW++KQ+E DY  L+  Y++L A  ++L +EK  L A+V  L  KL  ++ +
Sbjct:   90 PREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALAAQVDELRGKLNERQDQ 168          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.240e-15
Identity = 39/79 (49.37%), Postives = 57/79 (72.15%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKE 254
            PR++  LA++LGLQPRQVAIWFQN+RARW++KQ+E DY  L+  Y++L A  ++L +EK  L  +V  L  KL  ++ +
Sbjct:   89 PREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALADQVDELRGKLNERQDQ 167          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: ATB54_ARATH (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana GN=ATHB-54 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.844e-15
Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEV 215
            P +++ LA+ LGLQP QVA+WFQNRRAR+KTKQLE D D L+ SY  LK D+D LF + + LK++V
Sbjct:   92 PDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEHDCDSLKASYAKLKTDWDILFVQNQTLKSKV 157          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.756e-13
Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 3
Query:   36 LAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKE 254
            LA +LGL PRQVA+WFQNRRARWK K+LE++Y+ L+NS       +DN+  +K +L++EV+ L ++L   E+E
Sbjct:   86 LAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNS-------HDNVVVDKCRLESEVIQLKEQLYDAERE 151          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 32/62 (51.61%), Postives = 47/62 (75.81%), Query Frame = 3
Query:   24 KEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKA 209
            +++ L+++LGLQPRQ+A+WFQNRRARWK KQLE+ YD L+  Y+ +  +   L  E +KL+A
Sbjct:  104 RKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRA 165          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: ATB22_ARATH (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = 3
Query:   18 PRKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQ 239
            P +++ L+K+LGLQPRQ+A+WFQNR+ARWK KQLE       + Y SL+ ++D + +EKE L+ E++ L   ++
Sbjct:  103 PDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLE-------HLYESLRQEFDIVSREKELLQEELIQLKSMIR 169          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.578e-11
Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 3
Query:   36 LAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKEGKNTELPVVNKTLSQEP 305
            LA +LGL PRQVA+WFQNRRARWK K++E +Y  L+N+       Y+    EK +L +EV+ L ++L   E+E +      V  TLS  P
Sbjct:   91 LASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNA-------YETTVVEKCRLDSEVIHLKEQLYEAEREIQRL-AKRVEGTLSNSP 172          
BLAST of EY711154 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.515e-11
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 3
Query:   21 RKEIHLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDVLQNSYNSLKADYDNLFKEKEKLKAEVLTLTDKLQVKEKE 254
            RKE  +A +LGL PRQVA+WFQNRRARWK K+LE++Y  L+N        +DN+   + +L++++L LT++L   + E
Sbjct:   97 RKE-KIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKN-------HHDNVVLGQCQLESQILKLTEQLSEAQSE 166          
The following BLAST results are available for this feature:
BLAST of EY711154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
HOX8_ORYSJ1.056e-1540.20Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
HOX8_ORYSI1.056e-1540.20Homeobox-leucine zipper protein HOX8 OS=Oryza sati... [more]
HOX24_ORYSI1.056e-1550.63Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
HOX24_ORYSJ5.240e-1549.37Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
ATB54_ARATH6.844e-1559.09Homeobox-leucine zipper protein ATHB-54 OS=Arabido... [more]
ATB40_ARATH3.756e-1350.68Homeobox-leucine zipper protein ATHB-40 OS=Arabido... [more]
ATB51_ARATH1.427e-1251.61Putative homeobox-leucine zipper protein ATHB-51 O... [more]
ATB22_ARATH1.427e-1245.95Homeobox-leucine zipper protein ATHB-22 OS=Arabido... [more]
ATB21_ARATH1.578e-1144.44Homeobox-leucine zipper protein ATHB-21 OS=Arabido... [more]
ATB53_ARATH3.515e-1146.15Homeobox-leucine zipper protein ATHB-53 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711154 ID=EY711154; Name=EY711154; organism=Citrus sinensis; type=EST; length=933bp
TTGCCCGACCCACGCGTCCGCGAAAGGAAATTCACCTGGCAAAAGACCTT
GGCTTGCAGCCTAGACAGGTTGCGATTTGGTTCCAAAACCGCCGGGCTCG
TTGGAAGACTAAACAGCTCGAGAAGGATTACGATGTATTGCAAAACAGCT
ATAATAGCCTTAAGGCCGATTATGACAATCTCTTCAAGGAGAAAGAAAAG
CTAAAAGCTGAGGTTCTTACGCTCACAGACAAGCTGCAGGTCAAAGAGAA
AGAGGGTAAAAACACAGAATTGCCTGTAGTAAACAAGACATTGTCACAAG
AACCACCACAAATTTCAGAACCTGTTGCTGATTCTGCTGCCTCAGAGGGT
GAAGTATGCAAAGCCTCAGTTGTGGCTTGTAAGCAAGAAGATATAAGTTC
AGCCAAAAGTGATATATTTGATTCGGATAGCCCAAATTACACGGATGGGG
TTCACTCTTCACTCCTAGAAACTTGTGATTCATCTTATGTGTTTGAACCT
GAACAGTCCGATTTATCACAAGATGAAGATGATAGCTTGAGCAAGAATGT
CCTGTTGCCTCCATACGTCTTCCCAAAGCTTGAAGAAACTGAATACTCGG
AACCGCCCACGAATTCCTGTAACTTCGGATTCCCCCATTGAAGATCACGC
CTTTTGGTCATGGGCCTTCTGATCATGAAATCCTGGGATATAAGTTTATA
CTGCCTGGGGCCTTCCTTGGTTTTTTAAAAAGCATGTAAAATTGTAAGTT
AGGAAATAGAAATAATTCCATCAATGGCACCTTATGCAAAATGGGGGGTG
ATTTTGATTGCTGTTGAAAACAAAAAGGTGGGTTTCGCCCGCCTGAATTT
CTGTTCTTGGAGGAGTTCCTGAGGGGGGAAAGCACTTCTGGTTCAAAGGG
AACTAAAAAAACCTTTATTTGAAAAAGAACTTT
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