EY711153

Overview
NameEY711153
Unique NameEY711153
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_ECO57 (Dihydrolipoyl dehydrogenase OS=Escherichia coli O157:H7 GN=lpdA PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 6.288e-42
Identity = 93/213 (43.66%), Postives = 129/213 (60.56%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAKMN 862
            AA + A LGL+T  +E+   LGG CLNVGCIPSKALLH + +  EA  + A HG+ F   + D+  +   K+K ++ LT G+ G+ K  KV  V G GKF   + + V+  E G TV+   N IIA GS    LP I  ++ RI  ST AL L EVP++L+V+G G IGLEMG+V+  LGS++ VVE    ++P+ D +I   F+  +  K N
Sbjct:   21 AAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAK-ALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEG-ENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFN 231          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH1_BACST (Dihydrolipoyl dehydrogenase OS=Bacillus stearothermophilus GN=pdhD PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.390e-41
Identity = 99/211 (46.92%), Postives = 127/211 (60.19%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AAI+AAQLG K T +EK G LGG CLNVGCIPSKAL+ +SH Y +A HS    G+K  +V +D   +   K   V  LT G+EGL K NKV  VKG   F+  + V V   +   T    KN IIATGS    LP       RI+ STGAL L EVPK LVVIG GYIG+E+G+ +   G++VT++E A +I+   + ++ +     LK K
Sbjct:   24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALISASHRYEQAKHS-EEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTF-KNAIIATGSRPIELPNFKFSN-RILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKK 230          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_HAEIN (Dihydrolipoyl dehydrogenase OS=Haemophilus influenzae GN=lpdA PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 5.323e-41
Identity = 92/211 (43.60%), Postives = 127/211 (60.19%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AA + A LGL+T  +E+   LGG CLNVGCIPSKALLH + +  EA H+   +G+ FS   ++L  + A K+  V+ LT G+ G+ K  KVT V+G   F     +     +G  T VK  N IIA GS    LP I  ++ RI  ST AL L EVPKKL+++G G IGLEMG+V+  LGSEV VVE    ++P+ D ++   ++  ++ K
Sbjct:   21 AAFRCADLGLETVIVERYSTLGGVCLNVGCIPSKALLHVAKVIEEAKHA-NKNGIYFSEPRIELDEVRAGKEAVVAKLTGGLAGMAKARKVTVVEGLATFTDSHTLVARDRDGNPTTVKFDNAIIAAGSRPVQLPFIPHEDPRIWDSTDALKLKEVPKKLLIMGGGIIGLEMGTVYNALGSEVEVVEMFDQVIPAADKDVVGIYTKQVEKK 230          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_STAAW (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=pdhD PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.952e-41
Identity = 100/211 (47.39%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS  + GV   SV ++   +   K   V+ LT G+EGL K NKV  VKG   F+  + + V   +   T    KN IIATGS    +P      KR++ STGAL L EVP KLVV+G GYIG E+G+ +   GSEVT++E A DI+   + ++       +K K
Sbjct:   24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTY-NFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEK 230          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_STAAU (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus GN=pdhD PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.952e-41
Identity = 100/211 (47.39%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS  + GV   SV ++   +   K   V+ LT G+EGL K NKV  VKG   F+  + + V   +   T    KN IIATGS    +P      KR++ STGAL L EVP KLVV+G GYIG E+G+ +   GSEVT++E A DI+   + ++       +K K
Sbjct:   24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTY-NFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEK 230          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_STAAS (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=pdhD PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.952e-41
Identity = 100/211 (47.39%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS  + GV   SV ++   +   K   V+ LT G+EGL K NKV  VKG   F+  + + V   +   T    KN IIATGS    +P      KR++ STGAL L EVP KLVV+G GYIG E+G+ +   GSEVT++E A DI+   + ++       +K K
Sbjct:   24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTY-NFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEK 230          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_STAAR (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=pdhD PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.952e-41
Identity = 100/211 (47.39%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS  + GV   SV ++   +   K   V+ LT G+EGL K NKV  VKG   F+  + + V   +   T    KN IIATGS    +P      KR++ STGAL L EVP KLVV+G GYIG E+G+ +   GSEVT++E A DI+   + ++       +K K
Sbjct:   24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTY-NFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEK 230          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_STAAN (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain N315) GN=pdhD PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.952e-41
Identity = 100/211 (47.39%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS  + GV   SV ++   +   K   V+ LT G+EGL K NKV  VKG   F+  + + V   +   T    KN IIATGS    +P      KR++ STGAL L EVP KLVV+G GYIG E+G+ +   GSEVT++E A DI+   + ++       +K K
Sbjct:   24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTY-NFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEK 230          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_STAAM (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhD PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.952e-41
Identity = 100/211 (47.39%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS  + GV   SV ++   +   K   V+ LT G+EGL K NKV  VKG   F+  + + V   +   T    KN IIATGS    +P      KR++ STGAL L EVP KLVV+G GYIG E+G+ +   GSEVT++E A DI+   + ++       +K K
Sbjct:   24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTY-NFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEK 230          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_STAAC (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain COL) GN=pdhD PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.952e-41
Identity = 100/211 (47.39%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS  + GV   SV ++   +   K   V+ LT G+EGL K NKV  VKG   F+  + + V   +   T    KN IIATGS    +P      KR++ STGAL L EVP KLVV+G GYIG E+G+ +   GSEVT++E A DI+   + ++       +K K
Sbjct:   24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTY-NFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEK 230          
The following BLAST results are available for this feature:
BLAST of EY711153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
DLDH_ECO576.288e-4243.66Dihydrolipoyl dehydrogenase OS=Escherichia coli O1... [more]
DLDH1_BACST2.390e-4146.92Dihydrolipoyl dehydrogenase OS=Bacillus stearother... [more]
DLDH_HAEIN5.323e-4143.60Dihydrolipoyl dehydrogenase OS=Haemophilus influen... [more]
DLDH_STAAW6.952e-4147.39Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAU6.952e-4147.39Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAS6.952e-4147.39Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAR6.952e-4147.39Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAN6.952e-4147.39Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAM6.952e-4147.39Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAC6.952e-4147.39Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-D09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711153 ID=EY711153; Name=EY711153; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGACCAATTCAATCGCTTGATTGGAGAAAAAGTTGATTGAA
AAATGGCGATGGCAAGTCTTGCAAGAATAAAGCCGTACGTGCTGTCAAGG
AATCTCTCGAACTCGTTGAATGGTAATGTTTTCAAGTACAGTTTCTCGCT
TACAAGGGGCTTCGCTTCGGCATCTGATGAGAACGACGTCGTCGTCATCG
GAGGTGGACCTGGTGGTTACGTGGCCGCCATCAAGGCCGCCCAGCTTGGT
CTCAAGACTACGTGCATCGAGAAGCGTGGGGCCCTCGGCGGCACGTGCCT
TAACGTCGGATGCATCCCCTCTAAGGCACTTCTTCATTCTTCCCACATGT
ACCATGAAGCCATGCATTCTTTTGCCAGCCATGGTGTAAAGTTTTCTTCT
GTTGAAGTTGATTTGCCTGCTATGATGGCCCAAAAAGATAAAGCTGTGTC
TAATCTTACAAGAGGTATTGAAGGTCTATTCAAGAAGAACAAGGTAACCT
ATGTGAAAGGATATGGCAAGTTTATCTCCCCATCTGAGGTCTCTGTGGAC
ACCATTGAAGGTGGAAACACTGTCGTGAAAGGCAAGAATATCATAATTGC
TACTGGTTCTGACGTTAAGTCTCTACCTGNGATCACCATTGATGAAAAGA
GAATTGTGTCATCCACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAA
CTCGTGGTCATTGGGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTG
GGGCAGGCTTGGTTCAGAGGTCACTGTTGTTGAATTTGCAGCTGATATCG
TCCCAAGCATGGATGGGGAAATTCGCAGCAATTTCAGCGTTCACTTGAAA
GCAAAAATGAATTCATGCTCAAACTAAGGTGGTGGGAGTGATTATCTGNT
GAT
back to top