EY711153

Overview
NameEY711153
Unique NameEY711153
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_CHLP8 (Dihydrolipoyl dehydrogenase OS=Chlorobaculum parvum (strain NCIB 8327) GN=lpd PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.607e-29
Identity = 69/200 (34.50%), Postives = 117/200 (58.50%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEI 823
            AA+ AA+ G+K  C+ ++ +LGG C+N GCIP+KALL S+ +Y  A +  +  GV  S +  DL   + +  K     ++G+E + KK KV   +G         V V   +G    ++  NII+ATG+  + +P +  D K+I++S  AL L +VP+ ++V+G G IG+EM   + + G++VT+VE    ++P+ + E+
Sbjct:   25 AALHAARHGMKV-CLVEKASLGGVCVNWGCIPTKALLRSAEVYDLAKNP-SEFGVNVSELSFDLAQAVKRSRKVSLKSSKGVEFMLKKAKVEVWRGEAVLTGSKGVKVTAEDGSERSLEAANIIVATGAQPRVIPGLEPDGKKIITSREALILKDVPESMIVVGGGAIGVEMAWFYAKAGAKVTIVELMPRLLPAEEAEV 222          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: IRC15_YEAST (Increased recombination centers protein 15 OS=Saccharomyces cerevisiae GN=IRC15 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.105e-29
Identity = 70/204 (34.31%), Postives = 110/204 (53.92%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYH--EAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRS 829
            AA++A+Q GL T C+++R +LGG  L  G +PSK LL+ S++Y   +        G +    + D+ A  +     +  L    +    KN VT  KG   F  P  V +        +V+ K I++ATGS V   P + ID  +I+SS  AL+L+ +P +  ++G G IGLE+  ++  LGS VT+VE  ++I  +MD E+ S
Sbjct:   32 AAMQASQAGLLTACVDQRASLGGAYLVDGAVPSKTLLYESYLYRLLQQQELIEQRGTRLFPAKFDMQAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPFIVEAKYIVVATGSAVIQCPGVAIDNDKIISSDKALSLDYIPSRFTIMGGGTIGLEIACIFNNLGSRVTIVESQSEICQNMDNELAS 235          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_MYCLE (Dihydrolipoyl dehydrogenase OS=Mycobacterium leprae GN=lpd PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.105e-29
Identity = 76/212 (35.85%), Postives = 110/212 (51.89%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTV---VKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLK 850
            AAI+AAQLGL T  +E +   GG CLNVGCIPSK LLH++ + H       + G+       D      +  K       G+  L KKNK+T + GYG+F   + +SV+  EG       V   N+IIATGS  + +P  T+    +++    +   E+P  +V++GAG IG+E G V    G +VT+VEF    +P+ D E+        K
Sbjct:   18 AAIRAAQLGLSTAVVEPK-YWGGICLNVGCIPSKVLLHNAELAHIFTKEAKTFGIS-GDASFDYGIAYDRSRKVSEGRVAGVHFLMKKNKITEIHGYGRFTDANTLSVELSEGVPETPLKVTFNNVIIATGSKTRLVPG-TLLSTNVITYEEQILTRELPDSIVIVGAGAIGIEFGYVLKNYGVDVTIVEFLPRAMPNEDAEVSKEIEKQFK 226          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_ACHLA (Dihydrolipoyl dehydrogenase (Fragment) OS=Acholeplasma laidlawii GN=pdhD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.105e-29
Identity = 82/214 (38.32%), Postives = 120/214 (56.07%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPXI--TIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLK 850
            AAIKAAQ G K   +EK   +GG CLN GCIP+K  L S+ +++    S    GV  S  V  D   ++++KD  V  LT G+  L KKN V    G+G   S +EV V+        +K KN+IIATGS   V  +P +    ++  +V+S   L +   PK +V++G G IG+E  +V+   GS+VT++E    I+P+MD +IR  ++  LK
Sbjct:   19 AAIKAAQYGAKVALVEKE-VVGGICLNHGCIPTKTFLKSAKVFNTVKKSM-DFGVSTSGEVGFDWSKIVSRKDGVVKQLTNGVAFLLKKNGVDVYNGFGDIKSANEVVVN-----GESLKTKNVIIATGSSAVVPPIPGVKEAYEKGIVVTSRELLNVKNYPKSIVIVGGGVIGVEFATVFNSFGSKVTIIEMMDGILPTMDDDIRVAYAKTLK 225          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_SYNY3 (Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=lpdA PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 2.565e-27
Identity = 76/204 (37.25%), Postives = 111/204 (54.41%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS--FASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNT--VVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEI 823
            AA+ A + GLKT  IE +  +GGTC+N GCIPSKALL +S    E          G++ + V     A+ A  +  VS +   +     + KV  ++G+GK   P EV   T+ G N   ++K K I++  GS     P I ID K + +S  A+ L  +P+ + +IG+GYIGLE   V+  LG EVT++E   D++P  D EI
Sbjct:   21 AALHAVKCGLKTAIIEAKD-MGGTCVNRGCIPSKALLAASGRVREMSDQDHLQQLGIQINGVTFTREAIAAHANDLVSKIQSDLTNSLTRLKVDTIRGWGKVSGPQEV---TVIGDNETRILKAKEIMLCPGSVPFVPPGIEIDHKTVFTSDEAVKLETLPQWIAIIGSGYIGLEFSDVYTALGCEVTMIEALPDLMPGFDPEI 220          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: MERA_BACCE (Mercuric reductase OS=Bacillus cereus GN=merA PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.401e-25
Identity = 73/201 (36.32%), Postives = 114/201 (56.72%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNL-TRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEI 823
            +AI+A  L  K   IE RG +GGTC+NVGC+PSK LL +  + H A ++    G+  S+  VDL  ++ QK+  V+ +       L        +KG  KF++ + V V+    GN +   K  +IATG+   +     +DE   ++ST  L L +VP +L VIG+GYIG+E+G ++  LGSEVT+++ +  ++   D EI
Sbjct:  184 SAIEAVALNAKVAMIE-RGTVGGTCVNVGCVPSKTLLRAGEINHLAKNN-PFVGLHTSASNVDLAPLVKQKNDLVTEMRNEKYVNLIDDYGFELIKGESKFVNENTVEVN----GNQIT-AKRFLIATGASSTAPNIPGLDEVDYLTSTSLLELKKVPNRLTVIGSGYIGMELGQLFHNLGSEVTLIQRSERLLKEYDPEI 377          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: STHA_MYCTU (Probable soluble pyridine nucleotide transhydrogenase OS=Mycobacterium tuberculosis GN=sthA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.135e-25
Identity = 70/211 (33.18%), Postives = 110/211 (52.13%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLK 850
            AAI +A+LG     +E+   LGG C+N G IPSK L   + +Y   M+    +G  +   +   PA ++A+    +      +     +N+V  + G+G+FI P  + V D      T V G  IIIATG+       +  DE+R++ S G L L  +P  +VV+GAG IG+E  S++  LG++VTVVE   +++   D E+      HL+
Sbjct:   18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLR 227          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: STHA_MYCTA (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=sthA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.135e-25
Identity = 70/211 (33.18%), Postives = 110/211 (52.13%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLK 850
            AAI +A+LG     +E+   LGG C+N G IPSK L   + +Y   M+    +G  +   +   PA ++A+    +      +     +N+V  + G+G+FI P  + V D      T V G  IIIATG+       +  DE+R++ S G L L  +P  +VV+GAG IG+E  S++  LG++VTVVE   +++   D E+      HL+
Sbjct:   18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLR 227          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: STHA_MYCBT (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sthA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.135e-25
Identity = 70/211 (33.18%), Postives = 110/211 (52.13%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLK 850
            AAI +A+LG     +E+   LGG C+N G IPSK L   + +Y   M+    +G  +   +   PA ++A+    +      +     +N+V  + G+G+FI P  + V D      T V G  IIIATG+       +  DE+R++ S G L L  +P  +VV+GAG IG+E  S++  LG++VTVVE   +++   D E+      HL+
Sbjct:   18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLR 227          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: STHA_MYCBP (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.135e-25
Identity = 70/211 (33.18%), Postives = 110/211 (52.13%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLK 850
            AAI +A+LG     +E+   LGG C+N G IPSK L   + +Y   M+    +G  +   +   PA ++A+    +      +     +N+V  + G+G+FI P  + V D      T V G  IIIATG+       +  DE+R++ S G L L  +P  +VV+GAG IG+E  S++  LG++VTVVE   +++   D E+      HL+
Sbjct:   18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLR 227          
The following BLAST results are available for this feature:
BLAST of EY711153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
DLDH_CHLP81.607e-2934.50Dihydrolipoyl dehydrogenase OS=Chlorobaculum parvu... [more]
IRC15_YEAST6.105e-2934.31Increased recombination centers protein 15 OS=Sacc... [more]
DLDH_MYCLE6.105e-2935.85Dihydrolipoyl dehydrogenase OS=Mycobacterium lepra... [more]
DLDH_ACHLA6.105e-2938.32Dihydrolipoyl dehydrogenase (Fragment) OS=Acholepl... [more]
DLDH_SYNY32.565e-2737.25Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (... [more]
MERA_BACCE2.401e-2536.32Mercuric reductase OS=Bacillus cereus GN=merA PE=1... [more]
STHA_MYCTU3.135e-2533.18Probable soluble pyridine nucleotide transhydrogen... [more]
STHA_MYCTA3.135e-2533.18Soluble pyridine nucleotide transhydrogenase OS=My... [more]
STHA_MYCBT3.135e-2533.18Soluble pyridine nucleotide transhydrogenase OS=My... [more]
STHA_MYCBP3.135e-2533.18Soluble pyridine nucleotide transhydrogenase OS=My... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-D09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711153 ID=EY711153; Name=EY711153; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGACCAATTCAATCGCTTGATTGGAGAAAAAGTTGATTGAA
AAATGGCGATGGCAAGTCTTGCAAGAATAAAGCCGTACGTGCTGTCAAGG
AATCTCTCGAACTCGTTGAATGGTAATGTTTTCAAGTACAGTTTCTCGCT
TACAAGGGGCTTCGCTTCGGCATCTGATGAGAACGACGTCGTCGTCATCG
GAGGTGGACCTGGTGGTTACGTGGCCGCCATCAAGGCCGCCCAGCTTGGT
CTCAAGACTACGTGCATCGAGAAGCGTGGGGCCCTCGGCGGCACGTGCCT
TAACGTCGGATGCATCCCCTCTAAGGCACTTCTTCATTCTTCCCACATGT
ACCATGAAGCCATGCATTCTTTTGCCAGCCATGGTGTAAAGTTTTCTTCT
GTTGAAGTTGATTTGCCTGCTATGATGGCCCAAAAAGATAAAGCTGTGTC
TAATCTTACAAGAGGTATTGAAGGTCTATTCAAGAAGAACAAGGTAACCT
ATGTGAAAGGATATGGCAAGTTTATCTCCCCATCTGAGGTCTCTGTGGAC
ACCATTGAAGGTGGAAACACTGTCGTGAAAGGCAAGAATATCATAATTGC
TACTGGTTCTGACGTTAAGTCTCTACCTGNGATCACCATTGATGAAAAGA
GAATTGTGTCATCCACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAA
CTCGTGGTCATTGGGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTG
GGGCAGGCTTGGTTCAGAGGTCACTGTTGTTGAATTTGCAGCTGATATCG
TCCCAAGCATGGATGGGGAAATTCGCAGCAATTTCAGCGTTCACTTGAAA
GCAAAAATGAATTCATGCTCAAACTAAGGTGGTGGGAGTGATTATCTGNT
GAT
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