EY686996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: SDCS_STAS1 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sdcS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.423e-15 Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 20 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 334 ++ + +TE TSN AT T++LP+L ++ ++VHPLLLMVP A+ A +++L GTP N + F TG I I+ M G + + I + ++ L V G D Sbjct: 407 VITIFVLFLTEITSNTATATMILPILATLSVAVNVHPLLLMVPAAMAANCAYMLPVGTPPNAIVFGTGKISIKKMASVGFWVNLLSIVVIVLVVYFLVPPVLGID 511
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: S13A1_HUMAN (Solute carrier family 13 member 1 OS=Homo sapiens GN=SLC13A1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.423e-15 Identity = 39/111 (35.14%), Postives = 67/111 (60.36%), Query Frame = 2 Query: 20 IVCLISAI----ITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAL-----AFLMPTLGAYVF 325 ++ LIS++ +TE SN AT TL LP+L +A+ +HV+PL +++P + F+FLL P N + F+ GH+++ DM+K GL + I G+A + +++P Y + Sbjct: 472 LIILISSLMVTSLTEVASNPATITLFLPILSPLAEAIHVNPLYILIPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNIVGVAVVMLGICTWIVPMFDLYTY 582
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: S13A2_MOUSE (Solute carrier family 13 member 2 OS=Mus musculus GN=Slc13a2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.776e-15 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 2 Query: 2 PRPTRPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 334 P T I+ L+ AI TE TSN ATTTL LP+L +A+ + +HPL +M+P + A +F+L TP N + F+ G +++ DM + G L I G+ + + + +F D Sbjct: 451 PSATVLILSLLVAIFTECTSNVATTTLFLPILASMAQAICLHPLYVMLPCTLAASLAFMLPVATPPNAIVFSFGGLKVSDMARAGFLLNIIGVLTITLSINSWSIPIFKLD 561
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: S13A1_RAT (Solute carrier family 13 member 1 OS=Rattus norvegicus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14 Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 20 IVCLISAII----TEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPT 307 ++ LIS++I TE SN AT T++ P+L +A+ +HV+PL +++P + F+FLL P N + F+ GH+++ DM+K GL + I G+A + M T Sbjct: 472 LIILISSLIVTSLTEVASNPATITILFPILSPLAEAIHVNPLHILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNILGVAVVMLGMFT 571
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: S13A1_MOUSE (Solute carrier family 13 member 1 OS=Mus musculus GN=Slc13a1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.341e-14 Identity = 38/103 (36.89%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 8 PTRPIVCLISAIITEFT---SNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPT 307 P R I+ + S I+T T SN AT T++ P+L +A+ + V+PL +++P + F+FLL P N + F+ GH+++ DM+K GL + I G+A + M T Sbjct: 468 PVRLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIQVNPLQILLPSTLCTSFAFLLPVANPPNAIVFSYGHLKVIDMVKAGLGVNILGVAVVMLGMFT 570
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: S13A2_HUMAN (Solute carrier family 13 member 2 OS=Homo sapiens GN=SLC13A2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.089e-13 Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 20 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVF 325 I+ L+ A TE TSN ATTT+ LP+L +A+ + +HPL +M+P + +F+L TP N + F+ G +++ DM + G L I G+ +A + + G +F Sbjct: 462 ILSLLVATFTECTSNVATTTIFLPILASMAQAICLHPLYVMLPCTLATSLAFMLPVATPPNAIVFSFGDLKVLDMARAGFLLNIIGVLIIALAINSWGIPLF 563
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: YKG6_CAEEL (Uncharacterized transporter B0285.6 OS=Caenorhabditis elegans GN=B0285.6 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.170e-13 Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 20 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVF 325 I+ ++ ++TEF++N+AT ++ +P+ ++A+ + HPL +P AIG FSF+L TP+N + + T I + DM+ G+ L I IA A M T ++F Sbjct: 452 ILSIVVVVMTEFSTNSATASIFIPISFKMAEAVGAHPLYFSIPTAIGPSFSFMLPMATPANAIVYETKTIRMIDMVSCGVFLNIFCIAITAINMNTWAFWLF 553
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: SDCS_STAAR (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MRSA252) GN=sdcS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.222e-13 Identity = 35/105 (33.33%), Postives = 58/105 (55.24%), Query Frame = 2 Query: 20 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 334 ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++L GTP N + F +G I I+ M G + + + ++ + V G D Sbjct: 408 VITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYIMPIVLGID 512
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: SDCS_STAAW (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MW2) GN=sdcS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12 Identity = 35/105 (33.33%), Postives = 58/105 (55.24%), Query Frame = 2 Query: 20 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 334 ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++L GTP N + F +G I I+ M G + + + ++ + V G D Sbjct: 408 VITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMPIVLGID 512
BLAST of EY686996 vs. ExPASy Swiss-Prot
Match: SDCS_STAAS (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MSSA476) GN=sdcS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12 Identity = 35/105 (33.33%), Postives = 58/105 (55.24%), Query Frame = 2 Query: 20 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLATGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAFLMPTLGAYVFGTD 334 ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++L GTP N + F +G I I+ M G + + + ++ + V G D Sbjct: 408 VITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMPIVLGID 512 The following BLAST results are available for this feature:
BLAST of EY686996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >EY686996 ID=EY686996; Name=EY686996; organism=Citrus sinensis; type=EST; length=544bpback to top |