EY686994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METS3 (30S ribosomal protein S5P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps5p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.797e-18 Identity = 46/116 (39.66%), Postives = 75/116 (64.66%), Query Frame = 2 Query: 164 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 +W P TK+G+LV+EG I +++I+ LPI E +I+D L+ L++EVM + VQ+ ++G++ F+ V VG+ +G+VGLG ++EV AIR A+ AK +++ V RG C Sbjct: 7 EWEPKTKMGKLVKEGTITDIDEIFEKGLPIMELEIVDALVPD-LEEEVMDVNLVQRMHKSGRKVNFRVIVAVGNKNGYVGLGQGKAKEVGPAIRKAVDNAKYNLIKVRRGCGDWGC 121
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METST (30S ribosomal protein S5P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps5p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.018e-17 Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T+LGR V++G+I ++QI LPI E +I+D L+ L++EVM + VQ+ ++G++ F+ V VG+ +G+VGLG SQEV AIR A+ AK +++ V RG C Sbjct: 22 WEPKTELGRKVKDGEITDIDQILDKGLPIMELEIVDALLPD-LEEEVMDVNLVQRMHKSGRKVNFRVIVAVGNRNGYVGLGQGKSQEVGPAIRKAVDAAKYNLIKVRRGCGDWGC 135
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METVS (30S ribosomal protein S5P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps5p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.963e-17 Identity = 47/115 (40.87%), Postives = 75/115 (65.22%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ S+EV AIR AI AKLS++ V G C Sbjct: 16 WEPKTQVGRMVKEGTISDISYIMDKGLPLLEPEIVDVLLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAQAKLSLIKVRVGCGSWEC 129
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METVA (30S ribosomal protein S5P OS=Methanococcus vannielii GN=rps5p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.963e-17 Identity = 47/115 (40.87%), Postives = 75/115 (65.22%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ S+EV AIR AI AKLS++ V G C Sbjct: 16 WEPKTQVGRMVKEGTISDISYIMDKGLPLLEPEIVDVLLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAQAKLSLIKVRVGCGSWEC 129
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METMP (30S ribosomal protein S5P OS=Methanococcus maripaludis GN=rps5p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.963e-17 Identity = 47/115 (40.87%), Postives = 75/115 (65.22%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ S+EV AIR AI AKLS++ V G C Sbjct: 16 WEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWEC 129
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METM7 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps5p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.963e-17 Identity = 47/115 (40.87%), Postives = 75/115 (65.22%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ S+EV AIR AI AKLS++ V G C Sbjct: 20 WEPKTQIGRMVKEGTISDINYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRIGCGSWEC 133
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METM6 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps5p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.963e-17 Identity = 47/115 (40.87%), Postives = 75/115 (65.22%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ S+EV AIR AI AKLS++ V G C Sbjct: 20 WEPKTQIGRMVKEGTISDINYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWEC 133
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METB6 (30S ribosomal protein S5P OS=Methanoregula boonei (strain 6A8) GN=rps5p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.054e-17 Identity = 45/116 (38.79%), Postives = 74/116 (63.79%), Query Frame = 2 Query: 164 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 +W PVT LG+ V G+I+S++Q+ PIKE +I+D + L+DEV+ I +Q+ T +G+R +F+A V+VG+ +G++G G +V AI+ AI AK++++ V RG C Sbjct: 7 EWRPVTGLGKQVASGEIKSIDQVLESGRPIKEPEIVDMFLPD-LEDEVLDIAMMQRMTDSGRRVQFRAVVIVGNRNGYIGFGQGKDVQVGDAIKKAITKAKMNLVKVRRGCGSWEC 121
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METLZ (30S ribosomal protein S5P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps5p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.600e-17 Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 WVPVT LG+ V G+ S ++I PIKE I+D ++ L DEV+ I +Q+ T +G+R +F+A VV+G+ +G+VG G +V TAI+ AI AKL+++ V RG C Sbjct: 8 WVPVTGLGKKVMAGEFASFDEILASGQPIKEAGIVDAMLPD-LVDEVLCIDMMQRMTDSGRRIKFRAVVVIGNKNGYVGFGQGRDVQVGTAIKKAITNAKLNIVKVRRGCGSWEC 121
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_METM5 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps5p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.620e-17 Identity = 46/115 (40.00%), Postives = 74/115 (64.35%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T++GR+V+EG I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A V VG+ +G+VG+G+ S+EV AIR AI AKLS++ V G C Sbjct: 20 WEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVAVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWEC 133 The following BLAST results are available for this feature:
BLAST of EY686994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY686994 ID=EY686994; Name=EY686994; organism=Citrus sinensis; type=EST; length=638bpback to top |