EY686994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_HALWD (30S ribosomal protein S5P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps5p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.620e-17 Identity = 44/110 (40.00%), Postives = 73/110 (66.36%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGS 496 W P T+LGR+V++G + S+EQ LP+KE +++D L+ L DEV+ I VQ+ T +G+R +F+ V +G+ +G +G +V +AI+ AI +AKL+++ V+RGS Sbjct: 11 WTPRTRLGRMVQDGDVTSMEQALNSGLPLKEPELVDQLLPG-LDDEVLDINMVQRMTDSGRRVKFRCVVAIGNRNGFLGYAEGRDDQVGSAIQKAIDVAKLNLISVDRGS 119
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_META3 (30S ribosomal protein S5P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps5p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.470e-16 Identity = 46/115 (40.00%), Postives = 74/115 (64.35%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T++G+ V+EG I ++ I + LP+ E +I+D L+ L+++V+ + VQ+ ++G+R RF+A VVG+ +G VG+G+ S+EV AIR AI AKLS++ V G C Sbjct: 13 WEPKTQVGKKVKEGTITDIDYIIDNGLPLLEPEIVDALLPD-LEEQVLDVSLVQRMHKSGRRARFRATAVVGNRNGFVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRTGCGSWEC 126
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_HALMA (30S ribosomal protein S5P OS=Haloarcula marismortui GN=rps5p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.276e-16 Identity = 45/115 (39.13%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T+LG+ V EG+I S+++ LP+KE +++D L+ L+DEV+ I VQ+ T +G+R +F+ V VG+ DG +G +V AI+ AI +AKL+++ V RG C Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLVPD-LEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWEC 120
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_NANEQ (30S ribosomal protein S5P OS=Nanoarchaeum equitans GN=rps5p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.278e-16 Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 164 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPV-------------QKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 +W P TKLGRLV+EGKI ++++I + I+E +I+D L+ + L+ E MK + QK+T G +TR++ +VGD DGHVG+G+ S ++ A AI AKL+++ V RG C Sbjct: 6 EWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLLPN-LEVEFMKWRIIRGKFRSKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSWEC 133
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_NATPD (30S ribosomal protein S5P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps5p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.587e-16 Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGS 496 W P T+LGR V +G+I S++ LP+KE +++D L+ L+DEV+ I VQ+ T +G+R +F+ VV+G+ DG+VG +V AI+ AI +AKL+++ V GS Sbjct: 5 WEPRTRLGRKVADGEITSMQDALQSGLPLKEPELVDQLLPG-LEDEVLDINMVQRMTDSGRRVKFRCVVVIGNRDGYVGYAQGRDDQVGGAIQKAIDVAKLNIIDVPLGS 113
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_HALSA (30S ribosomal protein S5P OS=Halobacterium salinarium GN=rps5p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.297e-16 Identity = 44/115 (38.26%), Postives = 70/115 (60.87%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRC 511 W P T+LG LV++G++ + + LP+KE +I+D L+ L DEV+ I VQ+ T +G+R +F+ V +G+ DG+VG +V AI+ AI +AKL+++ V RG C Sbjct: 7 WQPKTRLGGLVQDGEVEDMSEALDTGLPLKEPEIVDQLLPG-LDDEVLDINMVQRMTDSGRRVKFRCVVAIGNRDGYVGYAEGRDDQVGGAIQKAIEVAKLNIIDVSRGCGSWEC 120
BLAST of EY686994 vs. ExPASy Swiss-Prot
Match: RS5_CENSY (30S ribosomal protein S5P OS=Cenarchaeum symbiosum GN=rps5p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 2 Query: 167 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSQEVATAIRGAIILAKLSVLYVERGSRGTRCR 514 WVP T LG+ V G+I SLE+I I+E II L+ LK EV+ + +QK T GQ TRFKA V G+ +G++G+G ++++ AI A A L+V ++ G CR Sbjct: 27 WVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLLPD-LKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141 The following BLAST results are available for this feature:
BLAST of EY686994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY686994 ID=EY686994; Name=EY686994; organism=Citrus sinensis; type=EST; length=638bpback to top |