EY711141

Overview
NameEY711141
Unique NameEY711141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_CLOPE (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens GN=dxs PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.234e-28
Identity = 74/213 (34.74%), Postives = 124/213 (58.22%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            ++AGLVG DG TH G FD++F+S +PNM ++AP    E M ++   A   + P   R+PRG  I V L P +K   +E GK   + EG+++AI+  G +VQ  ++AA  +K + +I + + +A F KP+D +L+  L+ +   ++T+E+    GGFG  V  +L   G  +   K+ ++   D++I+HG P    + +GL +  I  T++ LL
Sbjct:  414 DRAGLVGEDGETHQGIFDISFLSPMPNMTIVAPKCIDE-MEVILKWASNFNAPLAIRYPRGGDIDVNLKPLSK---IEYGKWEKVQEGEKIAIVATGKMVQHAMIAAQKIKEEKNIDILIINATFIKPIDKELLNSLSKDGFKIVTIEDNIKKGGFGEGVLEYLNEIGHKE---KIVTLAFNDKFIEHGKPDILYKINGLDAEGIKNTLIELL 619          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_CHRSD (1-deoxy-D-xylulose-5-phosphate synthase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dxs PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.234e-28
Identity = 76/211 (36.02%), Postives = 118/211 (55.92%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            F+ ++AG+VG DGPTH GA D++F+ C+P M+V+AP+DEAE   M+ +AA     P+  R+PRG G G  +  N +  P+   + R       VA+L +GS+       A  L +  +++     R  KPLD + I   A +H +L+T+EE  V GG GS V   L   G+    +++ ++ LPD +++HG PA+ L   GL +  I   V
Sbjct:  441 FAIDRAGVVGEDGPTHHGALDLSFLRCIPGMIVLAPADEAECRAML-SAAYHHPGPAAVRYPRGTGPGTQVASNLEALPIGEAETRRSGREGGVALLAFGSMNGPAGEVAERLDATHLNM-----RSVKPLDREAILAAARDHRLLVTLEESVVAGGAGSGVNELLAAEGV---QVEVLNLGLPDDFVEHGKPAELLAACGLDAEGIETAV 642          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_DESHY (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain Y51) GN=dxs PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28
Identity = 76/200 (38.00%), Postives = 113/200 (56.50%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLS 653
            ++AG+VG DGPTH G FD++F+  +PN+V MAP DE EL HM+ T+  +D  P   R+PR  G GV L    +  P  +GK  IL EG  + ++G G +V  C+ AA  L+ + +  TV + R+  PLD + I + A   + +ITVE+  + GG GS V   L   G+ D  ++       D Y+D G+ +   +  GLS
Sbjct:  415 DRAGVVGDDGPTHHGVFDISFLRVIPNLVFMAPKDENELRHMLYTSLQLDG-PVALRYPRSVGQGVELTEELRELP--VGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGSAVMEVLGDEGLTDVVVERLGY---DEYVDQGAISLLHQGYGLS 608          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_DESHD (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dxs PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28
Identity = 76/200 (38.00%), Postives = 113/200 (56.50%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLS 653
            ++AG+VG DGPTH G FD++F+  +PN+V MAP DE EL HM+ T+  +D  P   R+PR  G GV L    +  P  +GK  IL EG  + ++G G +V  C+ AA  L+ + +  TV + R+  PLD + I + A   + +ITVE+  + GG GS V   L   G+ D  ++       D Y+D G+ +   +  GLS
Sbjct:  415 DRAGVVGDDGPTHHGVFDISFLRVIPNLVFMAPKDENELRHMLYTSLQLDG-PVALRYPRSVGQGVELTEELRELP--VGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGSAVMEVLGDEGLTDVVVERLGY---DEYVDQGAISLLHQGYGLS 608          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_DESVV (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dxs PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.106e-28
Identity = 77/200 (38.50%), Postives = 113/200 (56.50%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGL 650
            ++AGLVG DGPTH GAFD++F+  +P+M ++AP DEA+L   + TA  + D P   R+PRG G G+  P     +PL +G G +L EG+ VA++  GS V   + AA  L  +     TV DAR+ KPL    +  +   H+ L+ VEE ++ GGF S V   L     L G   +R + LPD +++ G+  +     GL
Sbjct:  424 DRAGLVGEDGPTHHGAFDLSFLRHIPHMSIIAPRDEADLQAAMYTALHL-DAPLAIRYPRGVGFGI--PLAESPSPLPVGVGEVLKEGEGVAVIAVGSRVHPSLEAAERLAEETGRHATVFDARWVKPLPEAQLLDIVARHDALLFVEENALAGGFSSAVLELLADRNALSGK-HIRRIGLPDEFVEQGTQKELRVSLGL 619          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_DESVH (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dxs PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.106e-28
Identity = 77/200 (38.50%), Postives = 113/200 (56.50%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGL 650
            ++AGLVG DGPTH GAFD++F+  +P+M ++AP DEA+L   + TA  + D P   R+PRG G G+  P     +PL +G G +L EG+ VA++  GS V   + AA  L  +     TV DAR+ KPL    +  +   H+ L+ VEE ++ GGF S V   L     L G   +R + LPD +++ G+  +     GL
Sbjct:  424 DRAGLVGEDGPTHHGAFDLSFLRHIPHMSIIAPRDEADLQAAMYTALHL-DAPLAIRYPRGVGFGI--PLAESPSPLPVGVGEVLKEGEGVAVIAVGSRVHPSLEAAERLAEETGRHATVFDARWVKPLPEAQLLDIVARHDALLFVEENALAGGFSSAVLELLADRNALSGK-HIRRIGLPDEFVEQGTQKELRVSLGL 619          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_CLOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens (strain SM101 / Type A) GN=dxs PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.106e-28
Identity = 74/213 (34.74%), Postives = 123/213 (57.75%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            ++AGLVG DG TH G FD++F+S +PNM ++AP    E M ++   A   + P   R+PRG  I V L P +K   +E GK   + EG+++AI+  G +VQ  ++AA  +K + +I + + +A F KP+D +L+  L+ +   ++T+E+    GGFG  V  +L   G  +   K+ ++   D++I+HG P      +GL +  I  T++ LL
Sbjct:  414 DRAGLVGEDGETHQGIFDISFLSPMPNMTIVAPKCIDE-MEVILKWASNFNAPLAIRYPRGGDIDVNLKPLSK---IEYGKWEKVQEGEKIAIVATGKMVQHAMIAAQKIKEEKNIDILIINATFIKPIDKELLNSLSKDGFKIVTIEDNIKKGGFGEGVLEYLNEIGHEE---KIVTLAFNDKFIEHGKPDILYRINGLDAEGIKNTLIELL 619          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MARMS (1-deoxy-D-xylulose-5-phosphate synthase OS=Marinomonas sp. (strain MWYL1) GN=dxs PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.591e-28
Identity = 81/212 (38.21%), Postives = 118/212 (55.66%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDR-VAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            F+ ++AGLVG DGPTH G +D++++ C+PNMVVMAPSDE E   M+ T       P+  R+PRG G GV +   +  + L+IGK R L  G   + I G+G      + AAN L       T+ D RF KP+D + +     + ++++TVEE ++ GG GS V   L  + I    L L    LPD+Y +H S A  L+  GL +  I  ++
Sbjct:  419 FAIDRAGLVGEDGPTHAGVYDLSYLRCIPNMVVMAPSDEDECRKMLQTGYEYKG-PAAVRYPRGTGQGVDI--ESTLSTLKIGKSRTLRTGQSGIVICGFGRPTYDALKAANTL-----DATLLDMRFVKPIDEETL-LTHRDAKLIVTVEENAIMGGAGSAVSELLIANNINIPTLHLG---LPDQYEEHASHASMLKRVGLDADGIQKSI 618          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_ACIC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=dxs PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.691e-28
Identity = 75/197 (38.07%), Postives = 111/197 (56.35%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQL 635
            F  ++ GL G DGPTH G FD++++  +PN+V M P+DE EL  M+ T A++ D PS  R+PRG G G  +    +  P  IGK ++L EG+ +AILG G+++         L  Q     V + RF KP+DT+L+   A+     +T+E+   +GGFGS V   L   G     +++     PDR+I+HG   DQL
Sbjct:  410 FCMDRGGLSGDDGPTHHGLFDISYLRGIPNIVHMVPADEDELADMMYT-AMLHDGPSAIRYPRGTGPGHAVKQQPEALP--IGKAKVLHEGEDIAILGLGALLPMAEQIREELARQGYRAAVINPRFVKPVDTELLAHYADRVTAFLTLEDHVLMGGFGSAVMEELNALGKSTPVVRIG---WPDRFIEHGK-VDQL 599          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_EXIS2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dxs PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 83/220 (37.73%), Postives = 124/220 (56.36%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXRPKE 704
            F+ +++GLVGADG TH G FD+ FM  +PN+ ++   DE EL H++  +AV  + P   RFPRG GIGV  P +     + +    +  EG  VAI+ +G  VQ  +  A +L+  D+SV V +AR  KPLD  ++  L  E   L+T+EE  + GGFGS V   L  +   +   +++   +PD YI+HG   + LEE GL    I+  V S + + K+
Sbjct:  413 FTIDRSGLVGADGETHQGVFDIAFMRHVPNIRIVMAKDENELQHLL-YSAVKYEGPIAVRFPRGEGIGV--PMDETLHEISLDTWDVEREGTDVAIMAFGPQVQDALKIAELLEG-DVSVRVINARTIKPLDEKMLNALYAEGIPLVTLEEAVLKGGFGSAV---LEHANEQEAFPRVKRFGIPDWYIEHGGVNELLEEIGLLPGQIAEEVRSFVNQGKK 625          
The following BLAST results are available for this feature:
BLAST of EY711141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_CLOPE1.234e-2834.741-deoxy-D-xylulose-5-phosphate synthase OS=Clostri... [more]
DXS_CHRSD1.234e-2836.021-deoxy-D-xylulose-5-phosphate synthase OS=Chromoh... [more]
DXS_DESHY1.612e-2838.001-deoxy-D-xylulose-5-phosphate synthase OS=Desulfi... [more]
DXS_DESHD1.612e-2838.001-deoxy-D-xylulose-5-phosphate synthase OS=Desulfi... [more]
DXS_DESVV2.106e-2838.501-deoxy-D-xylulose-5-phosphate synthase OS=Desulfo... [more]
DXS_DESVH2.106e-2838.501-deoxy-D-xylulose-5-phosphate synthase OS=Desulfo... [more]
DXS_CLOPS2.106e-2834.741-deoxy-D-xylulose-5-phosphate synthase OS=Clostri... [more]
DXS_MARMS3.591e-2838.211-deoxy-D-xylulose-5-phosphate synthase OS=Marinom... [more]
DXS_ACIC54.691e-2838.071-deoxy-D-xylulose-5-phosphate synthase OS=Acidoba... [more]
DXS_EXIS28.001e-2837.731-deoxy-D-xylulose-5-phosphate synthase OS=Exiguob... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-C07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711141 ID=EY711141; Name=EY711141; organism=Citrus sinensis; type=EST; length=852bp
GATGGGAGCAGGTTGACATGATGTAGACCTTCAAAATTACCAGTCCGTTT
TCCCAAGAACAAGCTGGTTTGGTTGGTGCGGATGGACCTACTCACTGTGG
AGCATTTGACGTCACATTCATGTCTTGCTTGCCCAACATGGTGGTCATGG
CTCCATCTGATGAAGCTGAGCTAATGCACATGGTCGCTACCGCAGCAGTT
ATAGATGACAGGCCCAGCTGTTTCAGATTTCCAAGGGGCAACGGAATTGG
AGTTGTTCTCCCGCCTAATAACAAAGGAACTCCACTTGAGATTGGGAAAG
GAAGAATCCTAATGGAAGGCGATAGAGTGGCAATTTTGGGCTATGGTTCT
ATAGTCCAACAATGTGTGCTAGCTGCGAACATGCTTAAGAGCCAAGACAT
TTCCGTGACAGTGGCTGATGCAAGATTTTGCAAACCTTTGGATACAGACC
TCATTAGACAGTTGGCCAATGAGCATGAAATCCTAATTACTGTGGAAGAG
GGTTCTGTGGGAGGCTTTGGCTCTCATGTATGTCACTTTCTAACCTTAAG
TGGCATTCTGGATGGACCTCTCAAGTTGAGATCAATGGTGCTTCCTGATA
GATACATCGACCATGGATCACCAGCCGATCAGCTTGAAGAATCAGGGCTC
TCCTCNAGGCATATCTCTGCAACAGTCTTATCTCTCTTANGGAGGCCAAA
AGAGCCCTTCTGATTTAAGTATCATACAAATCAACAGCATCTTGCCCTTG
GATCAACTTACATTCCCAGTTGGGGGTGTAAACACTACAGGNCCAACTCT
AGAATCTTTACTTTCAATCCCCTGTAACATGAAGCATTACGTGGGATATA
AA
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