EY711141

Overview
NameEY711141
Unique NameEY711141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_BACFR (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides fragilis GN=dxs PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.328e-27
Identity = 75/230 (32.61%), Postives = 121/230 (52.61%), Query Frame = 3
Query:   33 KITSPFSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLE---IGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXRPKEP 707
            K+   F  ++AGLVG DGPTH G FD+ ++  +PN+ + +P DE EL  ++ TA + D  P   R+PRG G  V     +   PLE   +GKGR L +G+ +A++  G I +    A    ++   ISV   D RF KPLD +L+ ++  +   ++T+E+G + GG G  +  F+  +G      ++R + +PD++I+HGS        G+    I   +     R   P
Sbjct:  418 KLNVVFCLDRAGLVGEDGPTHHGVFDMAYLRPIPNLTISSPMDEHELRRLMYTAQLPDKGPFAIRYPRGRGSLV-----DWECPLEEIPVGKGRKLKDGNDLAVITIGPIGKLAARAIERAEADTGISVAHYDLRFLKPLDEELLHEVGKKFRHIVTIEDGIIKGGMGCAILEFMADNGYYP---EIRRIGVPDQFIEHGSVQQLYHLCGMDEEGIYKVITKNKLRMDAP 639          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_BACFN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dxs PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.328e-27
Identity = 75/230 (32.61%), Postives = 121/230 (52.61%), Query Frame = 3
Query:   33 KITSPFSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLE---IGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXRPKEP 707
            K+   F  ++AGLVG DGPTH G FD+ ++  +PN+ + +P DE EL  ++ TA + D  P   R+PRG G  V     +   PLE   +GKGR L +G+ +A++  G I +    A    ++   ISV   D RF KPLD +L+ ++  +   ++T+E+G + GG G  +  F+  +G      ++R + +PD++I+HGS        G+    I   +     R   P
Sbjct:  418 KLNVVFCLDRAGLVGEDGPTHHGVFDMAYLRPIPNLTISSPMDEHELRRLMYTAQLPDKGPFAIRYPRGRGSLV-----DWECPLEEIPVGKGRKLKDGNDLAVITIGPIGKLAARAIERAEADTGISVAHYDLRFLKPLDEELLHEVGKKFRHIVTIEDGIIKGGMGCAILEFMADNGYYP---EIRRIGVPDQFIEHGSVQQLYHLCGMDEEGIYKVITKNKLRMDAP 639          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MACCJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Macrococcus caseolyticus (strain JCSC5402) GN=dxs PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.040e-27
Identity = 73/222 (32.88%), Postives = 121/222 (54.50%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLP--PNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXRPKE 704
            F  +++GLVGADG TH G FD++F++ +PNM VM P DE E  H++  A    + P   R+PRGNG GV +   PN+    +  G   +L EG  V +L +G  ++        L  + +S+ V +ARF KPLD   +   A  +  ++TVEE  + GGFG+ + +  +    LD  + ++ + + D YI+HG  +  L++ G++  ++   +  L    +E
Sbjct:  412 FGIDRSGLVGADGETHQGVFDISFLTHMPNMTVMMPKDENEAYHLLYNAFYEYEGPIAIRYPRGNGYGVKIDSIPNS----VVRGDWEVLHEGTDVIVLSFGPTLKLIEAVREELLKEGVSIEVVNARFIKPLDYHYLAAAAKRNIPVLTVEEAMLSGGFGAAISNHYS---DLDLDVHVKRIGIDDEYIEHGDVSMLLDDIGINKANLIHEIKQLAISHEE 626          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_CLOD6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium difficile (strain 630) GN=dxs PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.361e-26
Identity = 73/219 (33.33%), Postives = 126/219 (57.53%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEI--GKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGP--LKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            F  ++AGLVG DG TH G FD+++++ +PN+VVMAP D  E+  M+  +  +D  P   R+PRG+   +     +KG   EI  GK  +L +G    IL  GS+V+  + A  +L  + I+ T+ +ARF KP+D  +++ L   H+ ++T+E+  V GGFGS +  F     I+D    + + ++ +P+ ++ HG+  +  +  GLS + I+  +  L+
Sbjct:  412 FLIDRAGLVGNDGETHHGMFDLSYLNSIPNIVVMAPKDTREMELMMDLSLKLDC-PLAIRYPRGSSYYL-----DKGEYGEIVLGKYEVLDDGQDTVILCIGSMVKHALEAKEILSREGINPTIVNARFLKPIDEGMLKALLKNHKNVVTIEDNIVTGGFGSRINKF-----IIDNEYNVNILNIAIPEEFVKHGNIDELYDFVGLSPKSIADKIRKLV 619          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_BACTN (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides thetaiotaomicron GN=dxs PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.361e-26
Identity = 69/213 (32.39%), Postives = 120/213 (56.34%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLE---IGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQD-ISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 680
            ++AGLVG DGPTH GAFD+ ++  +PN+ + +P +E EL  ++ TA + D  P   R+PRG G+ V     +   PLE   +GKGR L +G  +A++  G I  +   A    +S+   S+   D RF KPLD +L+ ++      ++T+E+G++ GG GS V  F+      +    ++ + +PD+++ HG+ A+  +  G+    ++  +L
Sbjct:  426 DRAGLVGEDGPTHHGAFDMAYLRPIPNLTIASPMNEHELRRLMYTAQLPDKGPFVLRYPRGRGVLV-----DWKCPLEEIPVGKGRKLKDGKDIAVISIGPIGNKARSAIARAESESGRSIAHYDLRFLKPLDEELLHEVGRTFRHIVTIEDGTIQGGMGSAVLEFMADH---EYTPTVKRIGIPDKFVQHGTVAELYQLCGMDEDSLTKELL 630          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_BACV8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dxs PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.489e-26
Identity = 71/211 (33.65%), Postives = 117/211 (55.45%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 683
            ++AGLVG DGPTH GAFD+ +M  +PN++V +P +E EL  ++ TA + D  P   R+PRG   G ++        +EIGKGR L EG  +A++  G I  Q   A    + +   S+   D RF KPLD  ++ ++    + ++TVE+G + GG GS +  F+  +   +   +++ + LPD+++ HGS  +     G+    I   ++S
Sbjct:  426 DRAGLVGEDGPTHHGAFDLAYMRPIPNLIVASPYNEHELRCLMYTAQLPDKGPFVIRYPRGR--GSLVDWKCPMQEIEIGKGRKLKEGKDIAVITLGPIGVQAEKAITHAEQETGKSIAHYDLRFLKPLDESMLHEIGKRFKQVVTVEDGVLKGGMGSAILEFMADN---EYNPQIKRIGLPDQFVQHGSVKELYHICGMDEEGIYKVLIS 631          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS2_STRCO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Streptomyces coelicolor GN=dxs2 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.277e-25
Identity = 70/217 (32.26%), Postives = 120/217 (55.30%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXR 695
            F  ++AG+ G DG +H G +D++ +  +P + + AP D  ++   +  A V+DD P+  RF +G  +G  +P   +   +++ +       D V ++  G++   C+  A++L  Q IS TV D R+ KP+D + +  LA  H +++TVE+ S VGG GS V   L  +G+    + LR   +P R++DH S A+ L E GL++  I+  V  L+ R
Sbjct:  412 FVLDRAGVTGTDGASHNGMWDMSILQVVPGLRLAAPRDADQVRAQLREAVVVDDAPTVVRFSKG-AVGPAVPAVGRVGGMDVLRAPGTGTPD-VLLVSVGALAPMCLEVADLLNKQGISTTVVDPRWVKPVD-EAMAPLAERHRVVVTVEDNSRVGGVGSAVAQALRDAGV---DVPLRDFGIPPRFLDHASRAEVLAEIGLTAPDIARQVTGLVAR 622          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_CLOK5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dxs PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.846e-25
Identity = 72/220 (32.73%), Postives = 121/220 (55.00%), Query Frame = 3
Query:   33 KITSPFSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            K+   F+ ++AG+VG DG TH G FD+++++ +PNM VM+P   AEL HM+   A+  + P   R+PRG G  V L P       E G+   ++   ++A++  G +V+  VLAA  L+   I V V  A F KPLD  ++++L  E   +IT+E+  + GG GS++  ++     L   + + ++   D ++ HG P+   +  GL +  I   VL ++
Sbjct:  407 KLPVVFAVDRAGIVGDDGETHQGIFDLSYLTEMPNMTVMSPKCMAELTHMLKW-ALNQNCPIAIRYPRG-GDNVYLTPLE---DFEFGRWEYILNKGKIALVAQGRMVEHAVLAAEKLEQMGILVRVISACFIKPLDKVMLKKLIEEDVTIITIEDNIIRGGLGSYILEYV---NTLHRKVDVINLGFKDEFVRHGKPSILYKLYGLDTGSIVDKVLKVV 618          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_CLOK1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=dxs PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.846e-25
Identity = 72/220 (32.73%), Postives = 121/220 (55.00%), Query Frame = 3
Query:   33 KITSPFSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            K+   F+ ++AG+VG DG TH G FD+++++ +PNM VM+P   AEL HM+   A+  + P   R+PRG G  V L P       E G+   ++   ++A++  G +V+  VLAA  L+   I V V  A F KPLD  ++++L  E   +IT+E+  + GG GS++  ++     L   + + ++   D ++ HG P+   +  GL +  I   VL ++
Sbjct:  407 KLPVVFAVDRAGIVGDDGETHQGIFDLSYLTEMPNMTVMSPKCMAELTHMLKW-ALNQNCPIAIRYPRG-GDNVYLTPLE---DFEFGRWEYILNKGKIALVAQGRMVEHAVLAAEKLEQMGILVRVISACFIKPLDKVMLKKLIEEDVTIITIEDNIIRGGLGSYILEYV---NTLHRKVDVINLGFKDEFVRHGKPSILYKLYGLDTGSIVDKVLKVV 618          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_SULDN (1-deoxy-D-xylulose-5-phosphate synthase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=dxs PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.081e-24
Identity = 73/217 (33.64%), Postives = 116/217 (53.46%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILM--EGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            F+ ++AG+VG DG TH G FDV+F+  +PNM + AP DE      +A AA     P   R+PRG+     LP   + +P E+ K ++L   +GD V  +GYG+ V +    + +L+ +   +++ D RF KPLD +++R +A +H +  I  +   +GG GS +  F     IL   ++L S    D +I HG   D  E  GL    ++  V +L+
Sbjct:  400 FALDRAGIVGEDGETHQGVFDVSFLRAIPNMTLFAPRDEKSFHQAMAFAAQY-QFPCSLRYPRGSFTQTSLP---ESSPFELAKSQLLQSNKGD-VLFIGYGNGVGRAYETSKLLEEK---ISILDLRFIKPLDKEMLRDMATKHNKWFIFSDSAKMGGVGSAILEFFADEKILH--VELESFEYEDSFITHGKTKDVEESLGLLPAQLAQKVKALI 606          
The following BLAST results are available for this feature:
BLAST of EY711141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_BACFR2.328e-2732.611-deoxy-D-xylulose-5-phosphate synthase OS=Bactero... [more]
DXS_BACFN2.328e-2732.611-deoxy-D-xylulose-5-phosphate synthase OS=Bactero... [more]
DXS_MACCJ3.040e-2732.881-deoxy-D-xylulose-5-phosphate synthase OS=Macroco... [more]
DXS_CLOD63.361e-2633.331-deoxy-D-xylulose-5-phosphate synthase OS=Clostri... [more]
DXS_BACTN3.361e-2632.391-deoxy-D-xylulose-5-phosphate synthase OS=Bactero... [more]
DXS_BACV87.489e-2633.651-deoxy-D-xylulose-5-phosphate synthase OS=Bactero... [more]
DXS2_STRCO1.277e-2532.261-deoxy-D-xylulose-5-phosphate synthase 2 OS=Strep... [more]
DXS_CLOK52.846e-2532.731-deoxy-D-xylulose-5-phosphate synthase OS=Clostri... [more]
DXS_CLOK12.846e-2532.731-deoxy-D-xylulose-5-phosphate synthase OS=Clostri... [more]
DXS_SULDN1.081e-2433.641-deoxy-D-xylulose-5-phosphate synthase OS=Sulfuri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-C07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711141 ID=EY711141; Name=EY711141; organism=Citrus sinensis; type=EST; length=852bp
GATGGGAGCAGGTTGACATGATGTAGACCTTCAAAATTACCAGTCCGTTT
TCCCAAGAACAAGCTGGTTTGGTTGGTGCGGATGGACCTACTCACTGTGG
AGCATTTGACGTCACATTCATGTCTTGCTTGCCCAACATGGTGGTCATGG
CTCCATCTGATGAAGCTGAGCTAATGCACATGGTCGCTACCGCAGCAGTT
ATAGATGACAGGCCCAGCTGTTTCAGATTTCCAAGGGGCAACGGAATTGG
AGTTGTTCTCCCGCCTAATAACAAAGGAACTCCACTTGAGATTGGGAAAG
GAAGAATCCTAATGGAAGGCGATAGAGTGGCAATTTTGGGCTATGGTTCT
ATAGTCCAACAATGTGTGCTAGCTGCGAACATGCTTAAGAGCCAAGACAT
TTCCGTGACAGTGGCTGATGCAAGATTTTGCAAACCTTTGGATACAGACC
TCATTAGACAGTTGGCCAATGAGCATGAAATCCTAATTACTGTGGAAGAG
GGTTCTGTGGGAGGCTTTGGCTCTCATGTATGTCACTTTCTAACCTTAAG
TGGCATTCTGGATGGACCTCTCAAGTTGAGATCAATGGTGCTTCCTGATA
GATACATCGACCATGGATCACCAGCCGATCAGCTTGAAGAATCAGGGCTC
TCCTCNAGGCATATCTCTGCAACAGTCTTATCTCTCTTANGGAGGCCAAA
AGAGCCCTTCTGATTTAAGTATCATACAAATCAACAGCATCTTGCCCTTG
GATCAACTTACATTCCCAGTTGGGGGTGTAAACACTACAGGNCCAACTCT
AGAATCTTTACTTTCAATCCCCTGTAACATGAAGCATTACGTGGGATATA
AA
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