EY711141

Overview
NameEY711141
Unique NameEY711141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_THESQ (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga sp. (strain RQ2) GN=dxs PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.146e-24
Identity = 71/215 (33.02%), Postives = 118/215 (54.88%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            F+ +++G+VG DGPTH G FD+ ++  +PNM +++PS   E +  + T     D P   R+P+ +  G V         +++G  +IL  G   AI+  G+I+       N +    + VTV +A   KPLDT +++++A EH+++ITVEE   +GGFGS V   L   G      K+ ++ + D ++ HGS  + L   GL S  ++ TVL+ +
Sbjct:  396 FAIDRSGVVGEDGPTHHGLFDMNYLLSVPNMKIISPSSPEEFVSSLYTVLKHLDGPVAIRYPKESFYGEVEFFLENMKEIDLG-WKILKRGREAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTTVLKEIAREHDLIITVEEAMKIGGFGSFVAQRLQEMGWQG---KIVNLGVEDIFVPHGSRKELLSMLGLDSEGLTKTVLTYI 599          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_STRGG (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=dxs PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.146e-24
Identity = 66/217 (30.41%), Postives = 117/217 (53.92%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXR 695
            F  ++AG+ G DG +H G +D++ + C+P + + AP D  ++   +  A  +DD P+  RF +G  +G  +    +   ++I +       D V I+  G++   C+  A++L +Q IS TV D R+ KP+D + +  LA  H +++TVE+ S  GG GS V   L  +G+    + LR   +P  ++DH S  + + E GL++  I+  V  L+ +
Sbjct:  412 FVLDRAGITGTDGASHNGMWDMSILQCVPTLRIAAPRDADQVRAQLREAVAVDDAPTVVRFSKG-AVGPAVKAVGRAGGMDILRRPTAARPD-VLIVSVGALAPMCLEIADLLDAQGISSTVVDPRWVKPVD-EALAPLAERHRVVVTVEDNSRAGGVGSAVAQSLRDAGV---DVPLRDFGIPPVFLDHASRGEVMAEIGLTAPDIARQVTGLVAK 622          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_PARUW (1-deoxy-D-xylulose-5-phosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=dxs PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.146e-24
Identity = 67/216 (31.02%), Postives = 115/216 (53.24%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPL---EIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 683
            F+ ++AG+ G DG TH G +D++F++ +PNM++  P +  +++  +  +A    RP+  R+P        L       P+   E+GKG +L+EG  + I+  G + Q  +   ++L    I  TV D  F KPLD++L  +L   H  ++T+EE S V G GS + +FL   G     +++ ++ +P+ ++DHG   D L E GL    I   + S
Sbjct:  416 FAIDRAGISGPDGSTHHGIYDISFLNAMPNMIIAQPRN-GQVLKELMESAFSWKRPTAIRYPN-------LMTEEFNHPICERELGKGEVLIEGTEILIVALGHMNQAALKVRDLLAQTGIEATVLDPIFVKPLDSELFCKLLLNHNKIVTIEEHSVVSGMGSIINNFLVGQGF--NQIQVLNLGIPEAFLDHGRNQDLLNEIGLVPEKIFRQIQS 621          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_THEMA (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga maritima GN=dxs PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.109e-24
Identity = 69/215 (32.09%), Postives = 118/215 (54.88%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            F+ +++G+VG DGPTH G FD+ ++  +PNM +++PS   E ++ + T     D P   R+P+ +  G V         +++G  +IL  G   AI+  G+I+       N +    + VTV +A   KPLDT +++++A +H+++ITVEE   +GGFGS V   L   G      K+ ++ + D ++ HG   + L   GL S  ++ TVL+ +
Sbjct:  396 FAIDRSGVVGEDGPTHHGLFDINYLLPVPNMKIISPSSPEEFVNSLYTVLKHLDGPVAIRYPKESFYGEVESLLENMKEIDLG-WKILKRGREAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTAVLKEIARDHDLIITVEEAMKIGGFGSFVAQRLQEMGWQG---KIVNLGVEDLFVPHGGRKELLSMLGLDSEGLTKTVLTYI 599          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_THEP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dxs PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.367e-24
Identity = 70/215 (32.56%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            F+ +++G+VG DGPTH G FD+ ++  +PNM +++PS   E +  + T     D P   R+P+ +  G V         +++G  +IL  G   AI+  G+I+       N +    + VTV +A   KPLDT +++++A +H+I+ITVEE   +GGFGS V   L   G      K+ ++ + D ++ HG   + L   GL S  ++ TVL+ +
Sbjct:  396 FAIDKSGVVGEDGPTHHGLFDINYLLPVPNMKIISPSSPEEFVSSLYTILKNLDGPVAIRYPKESFYGEVESILENMKKIDLG-WKILRRGKEAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTAVLKEIARDHDIIITVEEAMRIGGFGSFVAQRLQEMGWQG---KIVNVGVEDLFVPHGGRKELLSTLGLDSEGLTKTVLTYI 599          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_CLOTE (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium tetani GN=dxs PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.367e-24
Identity = 64/215 (29.77%), Postives = 120/215 (55.81%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 689
            F+ ++AGLVG DG TH G FD++++S +PNM +MAP    EL  M+   A+  + P   R+P+G     + P  N     + GK  +L +  +++I+  G +V++       LK ++I + + +A F KP+D +++ ++ +E + +IT+E+  + GGFG+ V +++  +   +  +K+ ++   D +I HG   D  +  GL    I   V+ L+
Sbjct:  412 FAIDRAGLVGEDGETHQGVFDMSYLSHMPNMTIMAPKCVEELEFML-NWALSQESPIAIRYPKGESRLNLKPIKN----FQKGKWEVLEDKGKISIIATGRMVEKAFNVKETLKERNIDIGLINATFVKPIDKEMLNKIIDEEKTIITLEDNVILGGFGNSVLNYVRDT---NSNIKVVNLGFKDEFIPHGKVDDLFKMYGLDEEAILKEVMKLM 618          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_THET8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dxs PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.009e-24
Identity = 68/213 (31.92%), Postives = 113/213 (53.05%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSL 686
            F+ ++AG+VGADG TH G FD+ ++  +PN+ + AP D  EL  M+  A  +   P   R+PR N   V   P      +  GK  +L EG    IL +G  ++  + AA      D  V V +ARF KPLD +++R+L + +++L   +   +GGFGS V   L   G+     +++ + LPDR+ +HG+      ++G+ +  I   + ++
Sbjct:  406 FAIDRAGIVGADGATHHGVFDIAYLRTVPNLQIAAPKDALELRAMLKKALEVGG-PVAIRYPRDN---VERAPEGVWPEIAWGKWEVLKEGTEAYILAFGKTLRYALEAA----GDDPRVGVVNARFLKPLDREMLREL-SRYKLLTVEDHQKMGGFGSAVLEALNEMGLKP---EVQILGLPDRFFEHGAIPSLHRQAGIDAEGIRKALAAM 606          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_HELHP (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter hepaticus GN=dxs PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.009e-24
Identity = 65/216 (30.09%), Postives = 112/216 (51.85%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGN-----GIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            F  ++AG+VG DG TH G FD+ ++  +P+MV+ AP D A L   VA A   +D P  FR+PRG+     G+ V            +G+  +L  G ++ ++GYG+ V +       L ++    ++ D RF KPLD  ++ ++   H  I +  +   +GG  S +  F+    I D  ++L+S  + DR++ HG+ A   +  GL + H+ + +
Sbjct:  419 FCIDRAGIVGEDGETHQGLFDIAYLRSIPHMVLFAPRDNASLQQAVAFAYRYNDSPCAFRYPRGSFTLEEGVFV-------SNEFVLGQAEMLKRGKKILLVGYGNGVGRAYKVYQALITEGYEPSLLDLRFVKPLDKHMLNEVFKTHTHICVFSDSYYMGGVASALLEFMAEENIKD--VQLKSFEIKDRFVPHGNTALIEQSLGLDTPHLVSKI 625          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_THET2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dxs PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.039e-23
Identity = 68/213 (31.92%), Postives = 112/213 (52.58%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSL 686
            F+ ++AG+VGADG TH G FD+ ++  +PN+ + AP D  EL  M+  A  +   P   R+PR N   V   P      +  GK  +L EG    IL +G  ++  + AA      D  V V +ARF KPLD +++R L + +++L   +   +GGFGS V   L   G+     +++ + LPDR+ +HG+      ++G+ +  I   + ++
Sbjct:  406 FAIDRAGIVGADGATHHGVFDIAYLRTVPNLQIAAPKDALELRAMLKKALEVGG-PVAIRYPRDN---VERAPEGVWPEIAWGKWEVLKEGTEAYILAFGKTLKYALEAA----GDDPRVGVVNARFLKPLDREMLRAL-SRYKLLTVEDHQRMGGFGSAVLEALNEMGLKP---EVQVLGLPDRFFEHGAIPSLHRQAGIDAEGIRKALAAM 606          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS2_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Streptomyces avermitilis GN=dxs2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.039e-23
Identity = 68/221 (30.77%), Postives = 117/221 (52.94%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILME----GDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXR 695
            F  ++AG+ G DG +H G +D++ +  +P + + AP D  ++   +  A  +DD P+  RF +G  +G  +P   +     IG   +L E       V ++  G++   C+  A +L  Q IS TV D R+ KP+D + +  LA  H +++TVE+ S VGG GS +   L  +G+    + LR   +P R++DH S  + + E GL++  I+  V  L+ +
Sbjct:  412 FVLDRAGVTGTDGASHNGMWDMSILQVVPGLRLAAPRDADQVRAQLREAVDVDDAPTVVRFSKG-AVGPAVPAVGR-----IGGMDVLREPGTDAPDVLLVSVGALAPMCLEIAGLLDKQGISATVVDPRWVKPVD-EAMAPLAERHRVVVTVEDNSRVGGVGSAIAQALRDAGV---DVPLRDFGIPPRFLDHASRGEVMAEIGLTAPDIARQVTGLVSK 622          
The following BLAST results are available for this feature:
BLAST of EY711141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_THESQ3.146e-2433.021-deoxy-D-xylulose-5-phosphate synthase OS=Thermot... [more]
DXS_STRGG3.146e-2430.411-deoxy-D-xylulose-5-phosphate synthase OS=Strepto... [more]
DXS_PARUW3.146e-2431.021-deoxy-D-xylulose-5-phosphate synthase OS=Protoch... [more]
DXS_THEMA4.109e-2432.091-deoxy-D-xylulose-5-phosphate synthase OS=Thermot... [more]
DXS_THEP15.367e-2432.561-deoxy-D-xylulose-5-phosphate synthase OS=Thermot... [more]
DXS_CLOTE5.367e-2429.771-deoxy-D-xylulose-5-phosphate synthase OS=Clostri... [more]
DXS_THET87.009e-2431.921-deoxy-D-xylulose-5-phosphate synthase OS=Thermus... [more]
DXS_HELHP7.009e-2430.091-deoxy-D-xylulose-5-phosphate synthase OS=Helicob... [more]
DXS_THET22.039e-2331.921-deoxy-D-xylulose-5-phosphate synthase OS=Thermus... [more]
DXS2_STRAW2.039e-2330.771-deoxy-D-xylulose-5-phosphate synthase 2 OS=Strep... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-C07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711141 ID=EY711141; Name=EY711141; organism=Citrus sinensis; type=EST; length=852bp
GATGGGAGCAGGTTGACATGATGTAGACCTTCAAAATTACCAGTCCGTTT
TCCCAAGAACAAGCTGGTTTGGTTGGTGCGGATGGACCTACTCACTGTGG
AGCATTTGACGTCACATTCATGTCTTGCTTGCCCAACATGGTGGTCATGG
CTCCATCTGATGAAGCTGAGCTAATGCACATGGTCGCTACCGCAGCAGTT
ATAGATGACAGGCCCAGCTGTTTCAGATTTCCAAGGGGCAACGGAATTGG
AGTTGTTCTCCCGCCTAATAACAAAGGAACTCCACTTGAGATTGGGAAAG
GAAGAATCCTAATGGAAGGCGATAGAGTGGCAATTTTGGGCTATGGTTCT
ATAGTCCAACAATGTGTGCTAGCTGCGAACATGCTTAAGAGCCAAGACAT
TTCCGTGACAGTGGCTGATGCAAGATTTTGCAAACCTTTGGATACAGACC
TCATTAGACAGTTGGCCAATGAGCATGAAATCCTAATTACTGTGGAAGAG
GGTTCTGTGGGAGGCTTTGGCTCTCATGTATGTCACTTTCTAACCTTAAG
TGGCATTCTGGATGGACCTCTCAAGTTGAGATCAATGGTGCTTCCTGATA
GATACATCGACCATGGATCACCAGCCGATCAGCTTGAAGAATCAGGGCTC
TCCTCNAGGCATATCTCTGCAACAGTCTTATCTCTCTTANGGAGGCCAAA
AGAGCCCTTCTGATTTAAGTATCATACAAATCAACAGCATCTTGCCCTTG
GATCAACTTACATTCCCAGTTGGGGGTGTAAACACTACAGGNCCAACTCT
AGAATCTTTACTTTCAATCCCCTGTAACATGAAGCATTACGTGGGATATA
AA
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