EY711141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCSS (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain MCS) GN=dxs PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 60/208 (28.85%), Postives = 109/208 (52.40%), Query Frame = 3 Query: 57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677 +++G+ G DG +H G +D++ + +P M V AP D A L + A ++D P+ RFP+G+ +G +P + +++ D V ++ G + A L+ Q I VTV D R+ P+ +++ + A H++++TVE+ G GG GS V L + + + R + LP ++ DH S + L + G++ R+IS + Sbjct: 414 DRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGSSVSAALRHAEV---DVPCRDVGLPQQFFDHASRGEVLADVGVTDRNISRQI 616
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain KMS) GN=dxs PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 60/208 (28.85%), Postives = 109/208 (52.40%), Query Frame = 3 Query: 57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677 +++G+ G DG +H G +D++ + +P M V AP D A L + A ++D P+ RFP+G+ +G +P + +++ D V ++ G + A L+ Q I VTV D R+ P+ +++ + A H++++TVE+ G GG GS V L + + + R + LP ++ DH S + L + G++ R+IS + Sbjct: 414 DRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGSSVSAALRHAEV---DVPCRDVGLPQQFFDHASRGEVLADVGVTDRNISRQI 616
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain JLS) GN=dxs PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 60/208 (28.85%), Postives = 109/208 (52.40%), Query Frame = 3 Query: 57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677 +++G+ G DG +H G +D++ + +P M V AP D A L + A ++D P+ RFP+G+ +G +P + +++ D V ++ G + A L+ Q I VTV D R+ P+ +++ + A H++++TVE+ G GG GS V L + + + R + LP ++ DH S + L + G++ R+IS + Sbjct: 414 DRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGSSVSAALRHAEV---DVPCRDVGLPQQFFDHASRGEVLADVGVTDRNISRQI 616
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCLE (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium leprae GN=dxs PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 62/208 (29.81%), Postives = 110/208 (52.88%), Query Frame = 3 Query: 57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677 ++AG+ G+DGP+H G +D++ + +P M V AP D L + A +DD P+ RFP+G+ + +P + + +++ V ++G G + A L +Q I VTV D R+ P+ D + +LA+ H++++T+E+ V GG G+ V L I D P R + LP + DH S ++ L + GL+ + ++ + Sbjct: 414 DRAGITGSDGPSHNGMWDLSMLGIVPGMRVAAPRDAIRLREELGEALDVDDGPTAIRFPKGD-VCEDIPALKRRSGVDVLAVPATGLAQDVLLVGVGVFASMALAVAKRLHNQGIGVTVIDPRWVLPV-CDGVLELAHTHKLIVTLEDNGVNGGVGAAVSTALRQVEI-DTP--CRDVGLPQEFYDHASRSEVLADLGLTDQDVARRI 616
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCLB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium leprae (strain Br4923) GN=dxs PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 62/208 (29.81%), Postives = 110/208 (52.88%), Query Frame = 3 Query: 57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677 ++AG+ G+DGP+H G +D++ + +P M V AP D L + A +DD P+ RFP+G+ + +P + + +++ V ++G G + A L +Q I VTV D R+ P+ D + +LA+ H++++T+E+ V GG G+ V L I D P R + LP + DH S ++ L + GL+ + ++ + Sbjct: 414 DRAGITGSDGPSHNGMWDLSMLGIVPGMRVAAPRDAIRLREELGEALDVDDGPTAIRFPKGD-VCEDIPALKRRSGVDVLAVPATGLAQDVLLVGVGVFASMALAVAKRLHNQGIGVTVIDPRWVLPV-CDGVLELAHTHKLIVTLEDNGVNGGVGAAVSTALRQVEI-DTP--CRDVGLPQEFYDHASRSEVLADLGLTDQDVARRI 616
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_CORJK (1-deoxy-D-xylulose-5-phosphate synthase OS=Corynebacterium jeikeium (strain K411) GN=dxs PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 64/212 (30.19%), Postives = 115/212 (54.25%), Query Frame = 3 Query: 57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGN---GIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 680 ++AG+ G+DG +H G +D++ +P + V AP D L + A +DD P+ RFP+G+ GI V ++ E + EG RV I+ +G++ +Q + AA L + S TV D + P D + + A ++++T+E+ V GG GS + + L+ +GI + +R++ +P ++ HGS + LE+ GL + ++ TV+ Sbjct: 420 DRAGITGSDGASHNGMWDLSITGIVPGIHVAAPRDARTLELALDRAVAVDDAPTVVRFPKGDAPAGIPAVREEDDYDVLFEQSGDK--SEG-RVLIVSFGALSKQALGAAQALCDANFSATVVDPHWVVP-TADSLLEFARGFDLIVTIEDNGVHGGAGSRLHYDLSQAGI---DVPVRNLGVPQEFLAHGSRGEVLEDLGLDAETVARTVV 624
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_ARTCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=dxs PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20 Identity = 68/237 (28.69%), Postives = 124/237 (52.32%), Query Frame = 3 Query: 57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGV---VLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXRPKEPF*FKYHTNQQHLALGS 755 ++AG+ G DG +H G +D++ + +P + + AP D + L + A I+D P+ RF +G+ +G L + G + + + + V I+ G++ + + AN L +Q IS TV D R+ P+ ++ LA+ H ++I +E+G GG GS + + +G+ L + LP ++DHG+ ++ LE GL+++ I+ V++ + K PF + QQH GS Sbjct: 424 DRAGVTGPDGASHHGMWDMSMVQIVPGLHLAAPRDASRLREELREAVAINDAPTVVRFSKGS-VGAEIEALERLSDGVDV-LARRPAGSTANDVLIVSVGAMSELALDVANRLGAQGISTTVVDPRWVLPVRRSIV-ALASHHRLVICIEDGVRAGGVGSRIRQEMRAAGV---DTALNEVGLPVEFLDHGTRSEVLERVGLTAQQITHDVVAQVLGTKVPF-ARPLPGQQHPTTGS 653
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_THEFY (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermobifida fusca (strain YX) GN=dxs PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20 Identity = 61/225 (27.11%), Postives = 109/225 (48.44%), Query Frame = 3 Query: 48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRIL------MEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXRPKE 704 F+ ++AG+ G DG +H G +D++ + +PN+ + P D L ++ A IDD P+ R+P+G V+PP +IG +L E + ++ G + Q C A+ L Q I VTV D R+ KPLD L+ + A + + + G VG G V L + D + +R+ + R+++H L + GL ++ ++ + ++ + E Sbjct: 413 FALDRAGITGDDGASHNGMWDLSILQVVPNLSIAVPRDAVRLRELLREAISIDDGPTVVRYPKG-----VVPPAIPAVD-QIGGMDVLRRPASGTEAPDLLLVAVGPMAQTCCEVADRLADQGIGVTVVDPRWVKPLDPALVSEAARHSVVAVVEDNGRVGAVGDAVARALRDA---DLDIPVRTFGIEQRFLEHAKRDRILAQMGLDAQGLARKLTEIVAQRAE 628
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium paratuberculosis GN=dxs PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20 Identity = 68/213 (31.92%), Postives = 112/213 (52.58%), Query Frame = 3 Query: 57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPP-NNKGTPLEIGKGRILMEGD----RVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677 ++AG+ G+DG +H G +D++ + +P M V AP D A L + A +DD P+ RFP+G+ +G +P +G+ L G + + V ++G G+ + A L Q I VTV D R+ P+ +D I +LA H++++T E+ V GG GS V L + LD P R + LP R+ +H S + L + L+ + I+ + Sbjct: 414 DRAGITGSDGASHNGMWDLSILGVVPGMRVAAPRDAARLREELGEALDVDDGPTALRFPKGD-VGEDIPAIERRGSGLS-GVDVLALPASGCNHDVLLIGVGAFAPMALAVARRLADQGIGVTVVDPRWVLPV-SDSILELAARHKLVVTCEDNGVNGGVGSAVSAALRRAE-LDVP--CRDVGLPQRFYEHASRGELLADLALTDQDIARRI 620
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium avium (strain 104) GN=dxs PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20 Identity = 68/213 (31.92%), Postives = 112/213 (52.58%), Query Frame = 3 Query: 57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPP-NNKGTPLEIGKGRILMEGD----RVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677 ++AG+ G+DG +H G +D++ + +P M V AP D A L + A +DD P+ RFP+G+ +G +P +G+ L G + + V ++G G+ + A L Q I VTV D R+ P+ +D I +LA H++++T E+ V GG GS V L + LD P R + LP R+ +H S + L + L+ + I+ + Sbjct: 414 DRAGITGSDGASHNGMWDLSILGVVPGMRVAAPRDAARLREELGEALDVDDGPTALRFPKGD-VGEDIPAIERRGSGLS-GVDVLALPASGCNHDVLLIGVGAFAPMALAVARRLADQGIGVTVVDPRWVLPV-SDSILELAARHKLVVTCEDNGVNGGVGSAVSAALRRAE-LDVP--CRDVGLPQRFYEHASRGELLADLALTDQDIARRI 620 The following BLAST results are available for this feature:
BLAST of EY711141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711141 ID=EY711141; Name=EY711141; organism=Citrus sinensis; type=EST; length=852bpback to top |