EY711141

Overview
NameEY711141
Unique NameEY711141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCSS (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain MCS) GN=dxs PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 60/208 (28.85%), Postives = 109/208 (52.40%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            +++G+ G DG +H G +D++ +  +P M V AP D A L   +  A  ++D P+  RFP+G+ +G  +P   +   +++         D V ++  G      +  A  L+ Q I VTV D R+  P+  +++ + A  H++++TVE+ G  GG GS V   L  + +    +  R + LP ++ DH S  + L + G++ R+IS  +
Sbjct:  414 DRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGSSVSAALRHAEV---DVPCRDVGLPQQFFDHASRGEVLADVGVTDRNISRQI 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain KMS) GN=dxs PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 60/208 (28.85%), Postives = 109/208 (52.40%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            +++G+ G DG +H G +D++ +  +P M V AP D A L   +  A  ++D P+  RFP+G+ +G  +P   +   +++         D V ++  G      +  A  L+ Q I VTV D R+  P+  +++ + A  H++++TVE+ G  GG GS V   L  + +    +  R + LP ++ DH S  + L + G++ R+IS  +
Sbjct:  414 DRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGSSVSAALRHAEV---DVPCRDVGLPQQFFDHASRGEVLADVGVTDRNISRQI 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain JLS) GN=dxs PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 60/208 (28.85%), Postives = 109/208 (52.40%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            +++G+ G DG +H G +D++ +  +P M V AP D A L   +  A  ++D P+  RFP+G+ +G  +P   +   +++         D V ++  G      +  A  L+ Q I VTV D R+  P+  +++ + A  H++++TVE+ G  GG GS V   L  + +    +  R + LP ++ DH S  + L + G++ R+IS  +
Sbjct:  414 DRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGSSVSAALRHAEV---DVPCRDVGLPQQFFDHASRGEVLADVGVTDRNISRQI 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCLE (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium leprae GN=dxs PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 62/208 (29.81%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            ++AG+ G+DGP+H G +D++ +  +P M V AP D   L   +  A  +DD P+  RFP+G+ +   +P   + + +++           V ++G G      +  A  L +Q I VTV D R+  P+  D + +LA+ H++++T+E+  V GG G+ V   L    I D P   R + LP  + DH S ++ L + GL+ + ++  +
Sbjct:  414 DRAGITGSDGPSHNGMWDLSMLGIVPGMRVAAPRDAIRLREELGEALDVDDGPTAIRFPKGD-VCEDIPALKRRSGVDVLAVPATGLAQDVLLVGVGVFASMALAVAKRLHNQGIGVTVIDPRWVLPV-CDGVLELAHTHKLIVTLEDNGVNGGVGAAVSTALRQVEI-DTP--CRDVGLPQEFYDHASRSEVLADLGLTDQDVARRI 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCLB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium leprae (strain Br4923) GN=dxs PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 62/208 (29.81%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            ++AG+ G+DGP+H G +D++ +  +P M V AP D   L   +  A  +DD P+  RFP+G+ +   +P   + + +++           V ++G G      +  A  L +Q I VTV D R+  P+  D + +LA+ H++++T+E+  V GG G+ V   L    I D P   R + LP  + DH S ++ L + GL+ + ++  +
Sbjct:  414 DRAGITGSDGPSHNGMWDLSMLGIVPGMRVAAPRDAIRLREELGEALDVDDGPTAIRFPKGD-VCEDIPALKRRSGVDVLAVPATGLAQDVLLVGVGVFASMALAVAKRLHNQGIGVTVIDPRWVLPV-CDGVLELAHTHKLIVTLEDNGVNGGVGAAVSTALRQVEI-DTP--CRDVGLPQEFYDHASRSEVLADLGLTDQDVARRI 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_CORJK (1-deoxy-D-xylulose-5-phosphate synthase OS=Corynebacterium jeikeium (strain K411) GN=dxs PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 64/212 (30.19%), Postives = 115/212 (54.25%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGN---GIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 680
            ++AG+ G+DG +H G +D++    +P + V AP D   L   +  A  +DD P+  RFP+G+   GI  V   ++     E    +   EG RV I+ +G++ +Q + AA  L   + S TV D  +  P   D + + A   ++++T+E+  V GG GS + + L+ +GI    + +R++ +P  ++ HGS  + LE+ GL +  ++ TV+
Sbjct:  420 DRAGITGSDGASHNGMWDLSITGIVPGIHVAAPRDARTLELALDRAVAVDDAPTVVRFPKGDAPAGIPAVREEDDYDVLFEQSGDK--SEG-RVLIVSFGALSKQALGAAQALCDANFSATVVDPHWVVP-TADSLLEFARGFDLIVTIEDNGVHGGAGSRLHYDLSQAGI---DVPVRNLGVPQEFLAHGSRGEVLEDLGLDAETVARTVV 624          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_ARTCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=dxs PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 68/237 (28.69%), Postives = 124/237 (52.32%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGV---VLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXRPKEPF*FKYHTNQQHLALGS 755
            ++AG+ G DG +H G +D++ +  +P + + AP D + L   +  A  I+D P+  RF +G+ +G     L   + G  + + +       + V I+  G++ +  +  AN L +Q IS TV D R+  P+   ++  LA+ H ++I +E+G   GG GS +   +  +G+      L  + LP  ++DHG+ ++ LE  GL+++ I+  V++ +   K PF  +    QQH   GS
Sbjct:  424 DRAGVTGPDGASHHGMWDMSMVQIVPGLHLAAPRDASRLREELREAVAINDAPTVVRFSKGS-VGAEIEALERLSDGVDV-LARRPAGSTANDVLIVSVGAMSELALDVANRLGAQGISTTVVDPRWVLPVRRSIV-ALASHHRLVICIEDGVRAGGVGSRIRQEMRAAGV---DTALNEVGLPVEFLDHGTRSEVLERVGLTAQQITHDVVAQVLGTKVPF-ARPLPGQQHPTTGS 653          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_THEFY (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermobifida fusca (strain YX) GN=dxs PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20
Identity = 61/225 (27.11%), Postives = 109/225 (48.44%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRIL------MEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXRPKE 704
            F+ ++AG+ G DG +H G +D++ +  +PN+ +  P D   L  ++  A  IDD P+  R+P+G     V+PP       +IG   +L       E   + ++  G + Q C   A+ L  Q I VTV D R+ KPLD  L+ + A    + +  + G VG  G  V   L  +   D  + +R+  +  R+++H      L + GL ++ ++  +  ++ +  E
Sbjct:  413 FALDRAGITGDDGASHNGMWDLSILQVVPNLSIAVPRDAVRLRELLREAISIDDGPTVVRYPKG-----VVPPAIPAVD-QIGGMDVLRRPASGTEAPDLLLVAVGPMAQTCCEVADRLADQGIGVTVVDPRWVKPLDPALVSEAARHSVVAVVEDNGRVGAVGDAVARALRDA---DLDIPVRTFGIEQRFLEHAKRDRILAQMGLDAQGLARKLTEIVAQRAE 628          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium paratuberculosis GN=dxs PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20
Identity = 68/213 (31.92%), Postives = 112/213 (52.58%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPP-NNKGTPLEIGKGRILMEGD----RVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            ++AG+ G+DG +H G +D++ +  +P M V AP D A L   +  A  +DD P+  RFP+G+ +G  +P    +G+ L  G   + +        V ++G G+     +  A  L  Q I VTV D R+  P+ +D I +LA  H++++T E+  V GG GS V   L  +  LD P   R + LP R+ +H S  + L +  L+ + I+  +
Sbjct:  414 DRAGITGSDGASHNGMWDLSILGVVPGMRVAAPRDAARLREELGEALDVDDGPTALRFPKGD-VGEDIPAIERRGSGLS-GVDVLALPASGCNHDVLLIGVGAFAPMALAVARRLADQGIGVTVVDPRWVLPV-SDSILELAARHKLVVTCEDNGVNGGVGSAVSAALRRAE-LDVP--CRDVGLPQRFYEHASRGELLADLALTDQDIARRI 620          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium avium (strain 104) GN=dxs PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20
Identity = 68/213 (31.92%), Postives = 112/213 (52.58%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPP-NNKGTPLEIGKGRILMEGD----RVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            ++AG+ G+DG +H G +D++ +  +P M V AP D A L   +  A  +DD P+  RFP+G+ +G  +P    +G+ L  G   + +        V ++G G+     +  A  L  Q I VTV D R+  P+ +D I +LA  H++++T E+  V GG GS V   L  +  LD P   R + LP R+ +H S  + L +  L+ + I+  +
Sbjct:  414 DRAGITGSDGASHNGMWDLSILGVVPGMRVAAPRDAARLREELGEALDVDDGPTALRFPKGD-VGEDIPAIERRGSGLS-GVDVLALPASGCNHDVLLIGVGAFAPMALAVARRLADQGIGVTVVDPRWVLPV-SDSILELAARHKLVVTCEDNGVNGGVGSAVSAALRRAE-LDVP--CRDVGLPQRFYEHASRGELLADLALTDQDIARRI 620          
The following BLAST results are available for this feature:
BLAST of EY711141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_MYCSS6.140e-2028.851-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCSK6.140e-2028.851-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCSJ6.140e-2028.851-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCLE6.140e-2029.811-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCLB6.140e-2029.811-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_CORJK6.140e-2030.191-deoxy-D-xylulose-5-phosphate synthase OS=Coryneb... [more]
DXS_ARTCA6.140e-2028.691-deoxy-D-xylulose-5-phosphate synthase OS=Arthrob... [more]
DXS_THEFY8.019e-2027.111-deoxy-D-xylulose-5-phosphate synthase OS=Thermob... [more]
DXS_MYCPA8.019e-2031.921-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCA18.019e-2031.921-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-C07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711141 ID=EY711141; Name=EY711141; organism=Citrus sinensis; type=EST; length=852bp
GATGGGAGCAGGTTGACATGATGTAGACCTTCAAAATTACCAGTCCGTTT
TCCCAAGAACAAGCTGGTTTGGTTGGTGCGGATGGACCTACTCACTGTGG
AGCATTTGACGTCACATTCATGTCTTGCTTGCCCAACATGGTGGTCATGG
CTCCATCTGATGAAGCTGAGCTAATGCACATGGTCGCTACCGCAGCAGTT
ATAGATGACAGGCCCAGCTGTTTCAGATTTCCAAGGGGCAACGGAATTGG
AGTTGTTCTCCCGCCTAATAACAAAGGAACTCCACTTGAGATTGGGAAAG
GAAGAATCCTAATGGAAGGCGATAGAGTGGCAATTTTGGGCTATGGTTCT
ATAGTCCAACAATGTGTGCTAGCTGCGAACATGCTTAAGAGCCAAGACAT
TTCCGTGACAGTGGCTGATGCAAGATTTTGCAAACCTTTGGATACAGACC
TCATTAGACAGTTGGCCAATGAGCATGAAATCCTAATTACTGTGGAAGAG
GGTTCTGTGGGAGGCTTTGGCTCTCATGTATGTCACTTTCTAACCTTAAG
TGGCATTCTGGATGGACCTCTCAAGTTGAGATCAATGGTGCTTCCTGATA
GATACATCGACCATGGATCACCAGCCGATCAGCTTGAAGAATCAGGGCTC
TCCTCNAGGCATATCTCTGCAACAGTCTTATCTCTCTTANGGAGGCCAAA
AGAGCCCTTCTGATTTAAGTATCATACAAATCAACAGCATCTTGCCCTTG
GATCAACTTACATTCCCAGTTGGGGGTGTAAACACTACAGGNCCAACTCT
AGAATCTTTACTTTCAATCCCCTGTAACATGAAGCATTACGTGGGATATA
AA
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