EY711141

Overview
NameEY711141
Unique NameEY711141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_ARCB4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Arcobacter butzleri (strain RM4018) GN=dxs PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.019e-20
Identity = 67/192 (34.90%), Postives = 104/192 (54.17%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEG-DRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHG 617
            F+ ++AG+VG DG TH GAFD++F+  +PNMV+ AP D   L   +  A  +++ P   R+PRG    +   P    TP  +GK  IL  G      +GYG+ V + +     L ++DI  TV D RF KPLD +L+ +L+ ++ +  I  +     G GS +  FL    I +  ++L S    D++I+HG
Sbjct:  399 FAMDRAGIVGNDGETHQGAFDISFLRFIPNMVLFAPRDNETLEQSLEFAYNLNN-PCAIRYPRGAFKKLNFVP----TPFVLGKAEILKTGISNKLFIGYGAGVSRAI-DTEALHNEDI--TVVDLRFVKPLDKNLLLELSKKYNDWYIFSDSQKQSGVGSAILEFLNDEKIHN--VQLTSFEYNDKFIEHG 580          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS1_KITGR (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Kitasatospora griseola GN=dxs1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.787e-19
Identity = 64/212 (30.19%), Postives = 111/212 (52.36%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILME---GDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISA 671
            F  ++AG+ G DG +H G +D++ +  +P + + AP D A +   V  A  ++D P+  RFP+G  +G   P   +     IG   +L        V ++  G +   C+ AA +L +  I+ TV D  + KP+D  L+ +LA  H +++TVE+ G  GG G+ +   +  + + D P  LR + +P  ++ H S  + LEE GL+   ++A
Sbjct:  413 FVLDRAGVTGNDGASHNGMWDLSVLQVVPGLRIAAPRDAARVREHVRQAVAVEDAPTVVRFPKGE-LGPEAPAIER-----IGGVDVLARTGPAPDVLLVAVGPMAAACLDAAALLAADGITATVVDPCWVKPVDPALV-ELAGAHRMVVTVEDNGRTGGVGAALAQAMRDADV-DTP--LRDLGIPQEFLAHASRGEILEEIGLTGTGVAA 614          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_WOLSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Wolinella succinogenes GN=dxs PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.333e-19
Identity = 69/223 (30.94%), Postives = 107/223 (47.98%), Query Frame = 3
Query:   33 KITSPFSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEG-DRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXR 695
            K+   F+ ++ G+VG DG TH G  D+ ++  +P+M +MAP     L   V  A      P  FR+PR +   V+       +P   GK   LMEG D V  +G+G+ V +    + ++ S +  V + D RF KPLD + + +L+ E+   +   + S VGG  S +  +    G     +++ SM L D YI HG      EE G   + +S  V   L R
Sbjct:  394 KLPVKFAIDRGGIVGEDGETHQGILDIGYLRLIPHMTLMAPRSNESLKEAVKFAKDFSLGPIAFRYPRKS--FVLQEGIFSESPFLYGKAERLMEGKDEVLFVGFGNGVGRAYEVSKVMAS-EYEVGLVDLRFVKPLDHETLWELSKEYRYWLVFSDASKVGGVASALLEWKAEVG---AEVEILSMELEDEYIQHGKVEQVEEEIGFDVKGLSQKVRERLER 610          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_STRC1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces sp. (strain CL190) GN=dxs PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.047e-19
Identity = 63/223 (28.25%), Postives = 115/223 (51.57%), Query Frame = 3
Query:   48 FSQEQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLXRPKEP 707
            F  ++AG+ G DG +H G +D++ +  +P + + AP D   +   +  A  +DD P+  RFP+   +G  +P  ++     +G   +L   +R  V ++  G + Q C+  A +L+++ I  TV D R+ KP+D  ++  LA EH ++  VE+ S   G GS V   L   G  D  + +R   +P++++ H    + L + GL+   I+  + + L   +EP
Sbjct:  413 FVLDRAGVTGVDGASHNGMWDMSVLQVVPGLRIAAPRDADHVRAQLREAVAVDDAPTLIRFPK-ESVGPRIPALDR-----VGGLDVLHRDERPEVLLVAVGVMAQVCLQTAELLRARGIGCTVVDPRWVKPVD-PVLPPLAAEHRLVAVVEDNSRAAGVGSAVALAL---GDADVDVPVRRFGIPEQFLAHARRGEVLADIGLTPVEIAGRIGASLPVREEP 625          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCVP (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=dxs PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.980e-19
Identity = 61/208 (29.33%), Postives = 105/208 (50.48%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            +++G+ G DG +H G +D++ +  +P M V AP D A L   +  A  + D P+  RFP+G+ +G  +P   +   +++         + V ++  G      +  A+ L++Q I VTV D R+  P+  + I  LA  H++++T+E+ G  GG GS V   L    I    +  R   LP  +  H S  + LE  GL+ R+I+  +
Sbjct:  414 DRSGVTGPDGASHNGMWDLSILGIVPGMRVAAPRDGARLREELGEALDVSDGPTAIRFPKGD-VGEDIPAIERRGDVDVLAVPADGMSEDVLLVAVGPFAAMALAVADRLRNQGIGVTVVDPRWVLPVPEE-IATLATRHKLVVTLEDNGGHGGVGSAVSGALRHKEI---DVPCRDAALPQEFFAHASRGEVLESVGLTERNIARQI 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCUA (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium ulcerans (strain Agy99) GN=dxs PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.980e-19
Identity = 60/208 (28.85%), Postives = 108/208 (51.92%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            ++AG+ G+DGP+H G +D++ +  +P + V AP D   L   +  A  +DD P+  RFP+G+ +G  +P   +   +++           V ++  G++    +  A  L +Q I VTV D R+  P+  D I  LA  H++++T+E+  V GG GS V   L  + I    +  R + LP ++ +H S  + L +  L+ + ++  V
Sbjct:  414 DRAGITGSDGPSHNGMWDLSMLGIIPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDIPALERRDGMDVLAVPASGLNHDVLLIAVGALASMALAVAKRLHNQGIGVTVIDPRWVLPV-ADGIGDLAVAHKLVVTLEDNGVNGGVGSAVSAALRRAEI---GVHCRDVGLPQQFFEHASRGELLADLRLTDQDVARRV 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCTU (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium tuberculosis GN=dxs PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 59/208 (28.37%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            ++AG+ G+DG +H G +D++ +  +P + V AP D   L   +  A  +DD P+  RFP+G+ +G  +    +   +++           V ++  G+     +  A  L +Q I VTV D R+  P+ +D +R+LA +H++L+T+E+  V GG GS V   L  + I    +  R + LP  + +H S ++ L + GL+ + ++  +
Sbjct:  414 DRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPV-SDGVRELAVQHKLLVTLEDNGVNGGAGSAVSAALRRAEI---DVPCRDVGLPQEFYEHASRSEVLADLGLTDQDVARRI 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCTA (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=dxs PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 59/208 (28.37%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            ++AG+ G+DG +H G +D++ +  +P + V AP D   L   +  A  +DD P+  RFP+G+ +G  +    +   +++           V ++  G+     +  A  L +Q I VTV D R+  P+ +D +R+LA +H++L+T+E+  V GG GS V   L  + I    +  R + LP  + +H S ++ L + GL+ + ++  +
Sbjct:  414 DRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPV-SDGVRELAVQHKLLVTLEDNGVNGGAGSAVSAALRRAEI---DVPCRDVGLPQEFYEHASRSEVLADLGLTDQDVARRI 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCBT (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=dxs PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 59/208 (28.37%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            ++AG+ G+DG +H G +D++ +  +P + V AP D   L   +  A  +DD P+  RFP+G+ +G  +    +   +++           V ++  G+     +  A  L +Q I VTV D R+  P+ +D +R+LA +H++L+T+E+  V GG GS V   L  + I    +  R + LP  + +H S ++ L + GL+ + ++  +
Sbjct:  414 DRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPV-SDGVRELAVQHKLLVTLEDNGVNGGAGSAVSAALRRAEI---DVPCRDVGLPQEFYEHASRSEVLADLGLTDQDVARRI 616          
BLAST of EY711141 vs. ExPASy Swiss-Prot
Match: DXS_MYCBP (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=dxs PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 59/208 (28.37%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   57 EQAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGVVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 677
            ++AG+ G+DG +H G +D++ +  +P + V AP D   L   +  A  +DD P+  RFP+G+ +G  +    +   +++           V ++  G+     +  A  L +Q I VTV D R+  P+ +D +R+LA +H++L+T+E+  V GG GS V   L  + I    +  R + LP  + +H S ++ L + GL+ + ++  +
Sbjct:  414 DRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPV-SDGVRELAVQHKLLVTLEDNGVNGGAGSAVSAALRRAEI---DVPCRDVGLPQEFYEHASRSEVLADLGLTDQDVARRI 616          
The following BLAST results are available for this feature:
BLAST of EY711141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_ARCB48.019e-2034.901-deoxy-D-xylulose-5-phosphate synthase OS=Arcobac... [more]
DXS1_KITGR1.787e-1930.191-deoxy-D-xylulose-5-phosphate synthase 1 OS=Kitas... [more]
DXS_WOLSU2.333e-1930.941-deoxy-D-xylulose-5-phosphate synthase OS=Wolinel... [more]
DXS_STRC13.047e-1928.251-deoxy-D-xylulose-5-phosphate synthase OS=Strepto... [more]
DXS_MYCVP3.980e-1929.331-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCUA3.980e-1928.851-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCTU5.198e-1928.371-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCTA5.198e-1928.371-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCBT5.198e-1928.371-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]
DXS_MYCBP5.198e-1928.371-deoxy-D-xylulose-5-phosphate synthase OS=Mycobac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-C07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711141 ID=EY711141; Name=EY711141; organism=Citrus sinensis; type=EST; length=852bp
GATGGGAGCAGGTTGACATGATGTAGACCTTCAAAATTACCAGTCCGTTT
TCCCAAGAACAAGCTGGTTTGGTTGGTGCGGATGGACCTACTCACTGTGG
AGCATTTGACGTCACATTCATGTCTTGCTTGCCCAACATGGTGGTCATGG
CTCCATCTGATGAAGCTGAGCTAATGCACATGGTCGCTACCGCAGCAGTT
ATAGATGACAGGCCCAGCTGTTTCAGATTTCCAAGGGGCAACGGAATTGG
AGTTGTTCTCCCGCCTAATAACAAAGGAACTCCACTTGAGATTGGGAAAG
GAAGAATCCTAATGGAAGGCGATAGAGTGGCAATTTTGGGCTATGGTTCT
ATAGTCCAACAATGTGTGCTAGCTGCGAACATGCTTAAGAGCCAAGACAT
TTCCGTGACAGTGGCTGATGCAAGATTTTGCAAACCTTTGGATACAGACC
TCATTAGACAGTTGGCCAATGAGCATGAAATCCTAATTACTGTGGAAGAG
GGTTCTGTGGGAGGCTTTGGCTCTCATGTATGTCACTTTCTAACCTTAAG
TGGCATTCTGGATGGACCTCTCAAGTTGAGATCAATGGTGCTTCCTGATA
GATACATCGACCATGGATCACCAGCCGATCAGCTTGAAGAATCAGGGCTC
TCCTCNAGGCATATCTCTGCAACAGTCTTATCTCTCTTANGGAGGCCAAA
AGAGCCCTTCTGATTTAAGTATCATACAAATCAACAGCATCTTGCCCTTG
GATCAACTTACATTCCCAGTTGGGGGTGTAAACACTACAGGNCCAACTCT
AGAATCTTTACTTTCAATCCCCTGTAACATGAAGCATTACGTGGGATATA
AA
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