EY686980

Overview
NameEY686980
Unique NameEY686980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY686980 vs. ExPASy Swiss-Prot
Match: PLDP1_ARATH (Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11
Identity = 53/168 (31.55%), Postives = 81/168 (48.21%), Query Frame = 1 
Query:    7 VRAILDWQRRTMDMMYKDVVQALRAKGIMEDPRNYLTFFCLGNREVKRSGEYEPAERPEDDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMEGARDTEIAMGGYQPYHLSTRVPARGQIHG-----FRMSLWYEHLGMLD---DTFLQPESSECVKKV 486
            VRAI+ WQ RT+   +  ++  L    I     +Y++F+  G R   +  E  P    +               +YVH+K+MIVDD   +IGSANIN RS+ G+RD+EI +       + +R+  +    G      R+SLW EHLG+     D  + P S    K++
Sbjct:  838 VRAIMHWQYRTIYRGHNSILTNLY-NTIGVKAHDYISFY--GLRAYGKLSEDGPVATSQ---------------VYVHSKIMIVDDRAALIGSANINDRSLLGSRDSEIGVLIEDTELVDSRMAGKPWKAGKFSSSLRLSLWSEHLGLRTGEIDQIIDPVSDSTYKEI 987
The following BLAST results are available for this feature:
BLAST of EY686980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PLDP1_ARATH2.920e-1131.55Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-031-F01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686980 ID=EY686980; Name=EY686980; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGGGCAATATTAGATTGGCAGAGAAGGACAATGGATATGAT
GTATAAGGATGTTGTTCAGGCTCTTAGAGCAAAGGGCATTATGGAAGATC
CCAGGAACTATTTGACATTCTTCTGCCTTGGGAATCGGGAGGTGAAGAGG
AGTGGTGAATATGAACCTGCAGAAAGGCCGGAGGATGATTCAGACTATCT
TAGAGCTCAGGAAGCTCGACGCTTCATGATCTACGTTCATGCCAAGATGA
TGATTGTTGATGACGAATACATTATAATTGGATCTGCCAACATCAACCAG
CGATCAATGGAGGGTGCCAGGGACACTGAGATAGCCATGGGAGGCTACCA
ACCATATCATTTGTCAACCAGGGTGCCAGCACGAGGCCAGATACACGGCT
TCCGTATGTCACTATGGTACGAGCACCTAGGCATGCTCGATGACACCTTC
CTCCAGCCAGAAAGTAGCGAATGTGTTAAGAAGGTTAACCAGATTGCCGA
ACGGTATTGGGACCTGTACTCCAGTGAGTCTCTTGAGCATGACTTGCCCG
GTCACTTGCTCCGCTACCCCATTGGTGTTTCTGGGGAAGGAGATGTCACG
GAAGTTTGCCAGAAACCGGGTTCTTCCCCGGACAGCGAGGGCCCGTGGTC
GCGGGAGCAGATCCGGGTTATCGGCGCCAGGGCGGGGAAGACCCGGTTGC
TTCCCCGGGAGGGGCGACAGAAGAGTGTCCCGGATTGGCCGCCCCCCGGC
GTGAGGGGGCCGAGGCGTTGGCAGAGTGGTGTGACGGGCGCACCGGCGTG
CGCCGCGGGGAGGGGGCTCCGCC
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