EY686976

Overview
NameEY686976
Unique NameEY686976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27_PIG (60S ribosomal protein L27 OS=Sus scrofa GN=RPL27 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27_MOUSE (60S ribosomal protein L27 OS=Mus musculus GN=Rpl27 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27_MACFA (60S ribosomal protein L27 OS=Macaca fascicularis GN=RPL27 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27_HUMAN (60S ribosomal protein L27 OS=Homo sapiens GN=RPL27 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27_CHICK (60S ribosomal protein L27 OS=Gallus gallus GN=RPL27 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27_CERNI (60S ribosomal protein L27 OS=Cervus nippon GN=RPL27 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27_BOVIN (60S ribosomal protein L27 OS=Bos taurus GN=RPL27 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27_CANFA (60S ribosomal protein L27 OS=Canis familiaris GN=RPL27 PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 7.898e-38
Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E K + EE++KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEEKYKTGKNKWFFQKLRF 136          
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27B_YEAST (60S ribosomal protein L27-B OS=Saccharomyces cerevisiae GN=RPL27B PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.031e-37
Identity = 72/136 (52.94%), Postives = 100/136 (73.53%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KFLK  K  ++++GRYAG+K VIVK  D+G++   +GH LVAGI++YP KV +K  AKK AK++++K F+K+VNY HL+PTRYTLDV+  K VVS ++ +   ++  A K  KK  EER + GKN+WFF+KLRF
Sbjct:    1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136          
BLAST of EY686976 vs. ExPASy Swiss-Prot
Match: RL27A_YEAST (60S ribosomal protein L27-A OS=Saccharomyces cerevisiae GN=RPL27A PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.001e-37
Identity = 72/136 (52.94%), Postives = 100/136 (73.53%), Query Frame = 2
Query:   50 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 454
            M KFLK  K  ++++GRYAG+K VIVK  D+G++   +GH LVAGI++YP KV +K  AKK AK++++K F+K+VNY HL+PTRYTLDV+  K VVS ++ +   ++  A K  KK  EER + GKN+WFF+KLRF
Sbjct:    1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136          
The following BLAST results are available for this feature:
BLAST of EY686976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RL27_PIG3.545e-3857.3560S ribosomal protein L27 OS=Sus scrofa GN=RPL27 P... [more]
RL27_MOUSE3.545e-3857.3560S ribosomal protein L27 OS=Mus musculus GN=Rpl27... [more]
RL27_MACFA3.545e-3857.3560S ribosomal protein L27 OS=Macaca fascicularis G... [more]
RL27_HUMAN3.545e-3857.3560S ribosomal protein L27 OS=Homo sapiens GN=RPL27... [more]
RL27_CHICK3.545e-3857.3560S ribosomal protein L27 OS=Gallus gallus GN=RPL2... [more]
RL27_CERNI3.545e-3857.3560S ribosomal protein L27 OS=Cervus nippon GN=RPL2... [more]
RL27_BOVIN3.545e-3857.3560S ribosomal protein L27 OS=Bos taurus GN=RPL27 P... [more]
RL27_CANFA7.898e-3856.6260S ribosomal protein L27 OS=Canis familiaris GN=R... [more]
RL27B_YEAST1.031e-3752.9460S ribosomal protein L27-B OS=Saccharomyces cerev... [more]
RL27A_YEAST3.001e-3752.9460S ribosomal protein L27-A OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-031-E09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686976 ID=EY686976; Name=EY686976; organism=Citrus sinensis; type=EST; length=810bp
CCACGCGTCCGCAGAGAGAGCCGCGGGTGCGCGAGGAGCGAGAGTTGAAA
TGGTGAAGTTTCTGAAACCAAACAAGGCCGTGATCCTTCTTCAGGGCCGT
TACGCCGGCCGGAAGGCGGTGATCGTGAAGTCGTTCGACGACGGGACCCG
CGAGAGGGCGTACGGGCACTGTTTGGTAGCGGGGATAAAGAAGTACCCGG
GCAAGGTCATCCGCAAGGACTCGGCGAAGAAGACAGCGAAGAAGTCACGC
GTCAAGGCCTTCGTCAAGTTGGTCAACTACCAGCACCTGATGCCCACGCG
CTACACTCTCGACGTCGATTTGAAGGACGTCGTGTCGGCCGATTCCCTCC
AGAGCAAGGACAAGAAGGTGACCGCTTGCAAGGAGACCAAGAAGCGCCTC
GAGGAGAGGTTTAAGACTGGCAAGAATCGTTGGTTCTTTACTAAGCTCAG
GTTTTAGATTTTTAACCAAAGGAAGAAAACGACTTGTGTTTTTGTTTTGT
TTTATTTTGCGTTATTGACAACGCTTTAGTTGTTACAGTGCCAATTTTGA
GATTCGTGTACCTTTCTTGGGAACTTCACTCTATTTCTGGATCTGGCACT
ATTTTCATGTGCAACTATTGGGGGCCTAGGGGTGTGGTCTGCCGGCGCGA
CTGGGGGGGAGCCCTCTTTTCCCCATAGAAGGGAGGCCCGTTTCGCGGGT
CCGGGGCGGCGCCGGGTGGGTGGGAAGACGGGGCCTGGCGCTGGGCGTCT
CCTATGCCGTTGCGGTGGGGGGCCGTCCCCCCGCCTCGCCTGGGCACCCC
CTGCTTCCCG
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