EY686972

Overview
NameEY686972
Unique NameEY686972
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686972 vs. ExPASy Swiss-Prot
Match: GLGB_EMENI (1,4-alpha-glucan-branching enzyme OS=Emericella nidulans GN=be1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.791e-15
Identity = 36/86 (41.86%), Postives = 58/86 (67.44%), Query Frame = 1
Query:  103 VVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALAD 360
            +VFER +L+++FNFH   S++DYRVG  + G Y++VLD+DD  FGG  R+D    +F+ +  ++ + +   VY P+RTA+  AL +
Sbjct:  599 LVFERADLLWIFNFHPTESFTDYRVGVEQAGTYRVVLDTDDQAFGGLGRIDQGTRFFTTDMEWNGRRNYLQVYIPTRTALALALEE 684          
BLAST of EY686972 vs. ExPASy Swiss-Prot
Match: GLGB_ASPOR (1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae GN=gbeA PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.791e-15
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 1
Query:   91 THASVVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALAD 360
            T   +VFER  L+++FNFH  +S++DYRVG  + G Y+IVLD+DDP FGG  R      +F+ +  ++ + +   VY P+RTA+V AL +
Sbjct:  598 TDKVLVFERAGLLWIFNFHPTNSFTDYRVGVEQSGTYRIVLDTDDPAFGGLNRNLKETRFFTTDLSWNGRSNFLQVYIPTRTALVLALEE 687          
BLAST of EY686972 vs. ExPASy Swiss-Prot
Match: GLGB_KLULA (1,4-alpha-glucan-branching enzyme OS=Kluyveromyces lactis GN=GLC3 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.958e-14
Identity = 37/85 (43.53%), Postives = 61/85 (71.76%), Query Frame = 1
Query:  103 VVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHN-AEYFSLEGWYDDQPHSFLVYAPSRTAVVYAL 354
            + FER  L+F+FNFH   S++DYR+G  +PG Y+IVL+SD   +GG+ R+D + ++YF+ +  ++++ +   VY P+RTA+V AL
Sbjct:  627 IAFERNGLLFIFNFHPTESFTDYRIGVNEPGCYRIVLNSDKHEYGGWDRIDESQSKYFTTDLKWNERNNFIQVYIPNRTALVLAL 711          
BLAST of EY686972 vs. ExPASy Swiss-Prot
Match: GLGB_DEBHA (1,4-alpha-glucan-branching enzyme OS=Debaryomyces hansenii GN=GLC3 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.269e-13
Identity = 36/94 (38.30%), Postives = 60/94 (63.83%), Query Frame = 1
Query:  103 VVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLD-------HNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYALADE 363
            +VFER  L+F+FNFH  +SY+DY++G   PG Y+IVL+SD   FGG+ R++          ++F+    ++D+ ++   Y PSRTA+V  + ++
Sbjct:  616 IVFERNGLLFIFNFHPTNSYADYKIGVETPGVYQIVLNSDSLSFGGHGRIEETNKETGEKLQFFTNNERWNDRSNALFCYIPSRTAIVLQVKEK 709          
BLAST of EY686972 vs. ExPASy Swiss-Prot
Match: GLGB_CANGA (1,4-alpha-glucan-branching enzyme OS=Candida glabrata GN=GLC3 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.658e-13
Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 1
Query:  103 VVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVV 345
            + FER   +FVFNFH   S++DYR+G    G YKIVL++D   FGG+ R+D   E+F+ +  ++++ +   VY PSRTA+V
Sbjct:  621 IAFERNGHLFVFNFHPTQSFTDYRIGVDVAGTYKIVLNTDRAEFGGHNRIDEAQEFFTTDLEWNNRRNFIQVYIPSRTAIV 701          
BLAST of EY686972 vs. ExPASy Swiss-Prot
Match: GLGB_SOLTU (1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.300e-13
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 1
Query:  103 VVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFS 276
            VVFERG+LVFVFNFH  ++Y  Y+VGC  PGKY++ LDSD   FGG+ R  H+ ++F+
Sbjct:  686 VVFERGDLVFVFNFHPKNTYEGYKVGCDLPGKYRVALDSDAWEFGGHGRTGHDVDHFT 743          
BLAST of EY686972 vs. ExPASy Swiss-Prot
Match: GLGB_ASHGO (1,4-alpha-glucan-branching enzyme OS=Ashbya gossypii GN=GLC3 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.833e-12
Identity = 36/88 (40.91%), Postives = 58/88 (65.91%), Query Frame = 1
Query:   91 THASVVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRL-DHNAEYFSLEGWYDDQPHSFLVYAPSRTAVVYA 351
            T   + FER  LVF+FNFH   S++DYR+G  + G Y+I+L+SD   FGG++R+ + N+ + + +  ++ + +   VY PSRTA+V A
Sbjct:  613 TDKVISFERNGLVFIFNFHPTQSFTDYRIGVDEAGAYRIILNSDREEFGGHRRIEEENSVFHTTDLEWNGRRNFIQVYLPSRTALVLA 700          
BLAST of EY686972 vs. ExPASy Swiss-Prot
Match: GLGB_GLOIN (1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.965e-12
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 1
Query:  103 VVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDDPLFGGYKRLDHNAEYFSLEGWYDDQPHSFLVYAPSRTAVV 345
            V FERGNL+++FNF    S++DY++G    GKY I L++D  +FGG+ R+D +  Y S    +D + +   VY P R A V
Sbjct:  599 VAFERGNLLWIFNFLPTQSFADYKIGTEWAGKYSIALNTDRKIFGGHDRIDESISYHSQPHEWDGRKNYIQVYIPCRVAPV 679          
The following BLAST results are available for this feature:
BLAST of EY686972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GLGB_EMENI8.791e-1541.861,4-alpha-glucan-branching enzyme OS=Emericella ni... [more]
GLGB_ASPOR8.791e-1543.331,4-alpha-glucan-branching enzyme OS=Aspergillus o... [more]
GLGB_KLULA1.958e-1443.531,4-alpha-glucan-branching enzyme OS=Kluyveromyces... [more]
GLGB_DEBHA1.269e-1338.301,4-alpha-glucan-branching enzyme OS=Debaryomyces ... [more]
GLGB_CANGA1.658e-1344.441,4-alpha-glucan-branching enzyme OS=Candida glabr... [more]
GLGB_SOLTU6.300e-1356.901,4-alpha-glucan-branching enzyme OS=Solanum tuber... [more]
GLGB_ASHGO1.833e-1240.911,4-alpha-glucan-branching enzyme OS=Ashbya gossyp... [more]
GLGB_GLOIN6.965e-1241.981,4-alpha-glucan-branching enzyme OS=Glomus intrar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-031-E01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686972 ID=EY686972; Name=EY686972; organism=Citrus sinensis; type=EST; length=917bp
CGGGCGGGGGNNTAAACCCCGCCCCCTTCTATCACGGGCGGCTCAGCCCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCGACCCACGCGT
CCGTAGTCTTTGAAAGAGGAAATCTTGTTTTCGTCTTCAACTTTCATTGG
AATAGTAGTTATTCCGACTATCGTGTGGGCTGCTTGAAGCCAGGGAAGTA
TAAGATTGTCTTGGATTCAGATGATCCACTGTTTGGAGGCTACAAAAGGC
TCGACCACAATGCCGAGTACTTCAGCTTGGAAGGGTGGTATGATGACCAA
CCTCATTCCTTCTTGGTATATGCGCCAAGCAGAACGGCTGTGGTCTATGC
TCTAGCAGATGAAGAAGAGCAACCTCTTAATGTATAAAATTAAATAACCA
TCAGGTTCTATTTAATATGGGAGTTTCGAGAGATCTCCTTGCTGTGCATC
AGCATTCCACTTACCAATCTTGAGAATAAAAGTACAGTGAGAGACTCGTT
GAATTACCCTTTCTGGTAATTTTTGCATCACATAAATTGGGGAGGTCAGG
ATGAACACCCACGAGAGGACAACCTGCATGCAACATTGCAATTTCATGCC
GAAGAATTGGAGACCAATACCGGGGTAAAAAGGTTTCCCGGCGACATGGG
GGAAAATGGGTTCCTGGTTCCGTAAATCGGACCGAGATTGGGAGAATAAA
TGCCGTAACCGGCACAAAGAAGGCGTCCGCGTGTGCGTGCAGGAACAGTG
GGCGCGGGGGGCGGGCGCGGACGCGATGAGGCACCGTGTTGCGCAACCAG
CGGGAGCAAAGAATGTGCGAGAGCTCAGAGGGAGACGGGAGCCACCTCCA
GCCGAGGGCGGGAATTCGAGGGCGGGGGGGCGTGTTTTTGCTGATTCATA
TAACAATAAACCCACAA
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