EY686969

Overview
NameEY686969
Unique NameEY686969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO1_YEAST (Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=SOR1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11
Identity = 36/112 (32.14%), Postives = 65/112 (58.04%), Query Frame = 1 
Query:   19 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK-NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVM 348
            G   DV F+C+G +  +  A+  T  GG +  VGMG +    P+   + +E+ ++G FRY    +   + L+ +GK++VKPL+TH+F F  ++  +A++ + A GG  +K +
Sbjct:  243 GNHADVVFECSGADVCIDAAVKTTKVGGTMVQVGMGKNYTNFPIAEVSGKEMKLIGCFRYSFGDYRDAVNLVATGKVNVKPLITHKFKF--EDAAKAYDYNIAHGGEVVKTI 352
[Close]
BLAST of EY686969 vs. ExPASy Swiss-Prot
Match: DHSO_BACSU (Sorbitol dehydrogenase OS=Bacillus subtilis GN=gutB PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 8.764e-11
Identity = 34/97 (35.05%), Postives = 58/97 (59.79%), Query Frame = 1 
Query:    7 THASGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 294
            T  +  G+DV+++ AG    + +AL +   GGK+ +VG+   +E+ + +   A  E+D+ G+FRY NT+P  +E L SG +D K LVT ++   Q +
Sbjct:  235 TITNDRGVDVAWETAGNPAALQSALASVRRGGKLAIVGLPSQNEIPLNVPFIADNEIDIYGIFRYANTYPKGIEFLASGIVDTKHLVTDQYSLEQTQ 331
The following BLAST results are available for this feature:
BLAST of EY686969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
DHSO1_YEAST5.138e-1132.14Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisi... [more]
DHSO_BACSU8.764e-1135.05Sorbitol dehydrogenase OS=Bacillus subtilis GN=gut... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-031-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686969 ID=EY686969; Name=EY686969; organism=Citrus sinensis; type=EST; length=838bp
TGCCCGACCCACGCGTCCGGGACAGGAATAGATGTGAGCTTTGATTGTGC
AGGCCTTAACAAAACCATGTCAACAGCACTGGGCGCCACTTGTGCAGGTG
GTAAAGTTTGCCTCGTGGGGATGGGTCATCATGAAATGACTGTCCCACTC
ACTCCAGCTGCTGTAAGGGAAGTGGATGTGGTGGGGGTGTTTCGCTACAA
GAATACCTGGCCACTGTGTCTGGAGTTGCTTAGAAGCGGAAAGATTGATG
TAAAGCCCCTTGTCACGCACAGGTTTGGTTTCTCCCAGAAAGAAGTGGAA
GAGGCCTTTGAAACAAGTGCTCGTGGTGGTACTGCAATCAAGGTCATGTT
TAATCTGTAAGATACAATGTACTGCAATCAAGGTCATGTTTAATCTGTAC
AATACAACGGCCATGTAAACGTTTGGGCAAACGATTAAATAAAATGGAAT
TGTCGCCGTGTAAACATACGCACACCTGCCCGCCACCTAGTATCTCTTCT
ATAGCGAGCACAAAATACACATCCCTGGGCGGGAAAGTTACACGTCCCTG
GATGGGGGGAGCCTTGCCCAAAACCAAATTAATCACCTTGCGAACGATGC
CCCCTTTCCCCCAGCTGGGGTAACTACCCAAGAATCCCATACCGGAGGCC
CCCTTTATAGCATTGCCGCCACCTGAACGGCACACTGAGATCCCCACTTG
TAACAAACTATTACCCCTCGCCGCCCGTGTCTGCCCCGCCCTAGTAGTGT
GAGAGTCTACAACATTGCCCTCTATCTACAAACCCGTATCGCCGCATGGC
CTCCGTTGCATACCCCCCACCCCCCGGAATTCACGCCG
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