EY686935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_DICDI (Homogentisate 1,2-dioxygenase OS=Dictyostelium discoideum GN=hgd PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 5.524e-54 Identity = 107/195 (54.87%), Postives = 136/195 (69.74%), Query Frame = 2 Query: 107 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDI-PDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688 D Y+SGFGNSF SEAI G LP+G+N+P CP LYAEQ+SG +FT+PR QRSWLYRI+PS H P K P LV D +N + P QLRWKP I D P DF++GL TI GAG + +RHG AIH+YTA KSM+N +F N+DGDFL+VPQ+G L I TE G ++V GEI V+ +G F+ ++ +GP+ Sbjct: 7 DYEYQSGFGNSFESEAIKGTLPKGRNAPQNCPLDLYAEQLSGNAFTAPRHTQQRSWLYRIRPSVCHTPLK---PIDSGLVC--DLNNLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHASVRHGLAIHIYTATKSMENKSFYNSDGDFLIVPQQGTLDIQTEFGFMKVKSGEICVIQRGITFSVNV-EGPT 195 HSP 2 Score: 23.483 bits (49), Expect = 5.524e-54 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 681 GHPRGYIAESFGAH 722 G RGYI E FG+H Sbjct: 193 GPTRGYICEVFGSH 206
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BORPE (Homogentisate 1,2-dioxygenase OS=Bordetella pertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.294e-53 Identity = 100/190 (52.63%), Postives = 136/190 (71.58%), Query Frame = 2 Query: 110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679 L+Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P H PF P A + +S+F + TP QLRW P+ +PD+PTDFIDG++T G G + G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R L D Sbjct: 3 LHYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLD 189
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BORPA (Homogentisate 1,2-dioxygenase OS=Bordetella parapertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.914e-53 Identity = 100/190 (52.63%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679 L Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P H PF P A + +S+F + TP QLRW P+ +PD+PTDFIDG++T G G + G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R L D Sbjct: 3 LQYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLD 189
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BORBR (Homogentisate 1,2-dioxygenase OS=Bordetella bronchiseptica GN=hmgA PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.914e-53 Identity = 100/190 (52.63%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679 L Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P H PF P A + +S+F + TP QLRW P+ +PD+PTDFIDG++T G G + G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R L D Sbjct: 3 LQYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLD 189
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BORA1 (Homogentisate 1,2-dioxygenase OS=Bordetella avium (strain 197N) GN=hmgA PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.540e-52 Identity = 103/190 (54.21%), Postives = 131/190 (68.95%), Query Frame = 2 Query: 110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679 LNY+SGFGN+ ++EA+ GALP+G+NSP CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P H PF+P A L D TP QLRW P+ +P +PTDFIDG++T G G + G IH+Y AN+SM F NAD + L+VPQ GRL +ATE G L++ P EIAVLP+G RF L D Sbjct: 3 LNYQSGFGNACATEALPGALPQGRNSPQQCPYGLYAEQLSGTAFTAPRSENRRSWLYRIRPGVVHRPFEPYAGAPHWLA---DFGTGPVTPNQLRWSPLPLPATPTDFIDGVHTWGGNGGPDEQSGVGIHLYAANQSMKGRFFYNADAEMLLVPQLGRLRLATEMGLLDLEPLEIAVLPRGVRFRVELLD 189
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RALPJ (Homogentisate 1,2-dioxygenase OS=Ralstonia pickettii (strain 12J) GN=hmgA PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.733e-52 Identity = 103/189 (54.50%), Postives = 130/189 (68.78%), Query Frame = 2 Query: 116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682 Y+SGFGN FS+EA+ GALP GQNSP P+GLYAEQISGT+FT+PR N+RSWLYRI+P A H PF+ A G+ S F++ +P QLRW P+ P + TDFIDG+ T G G + G IH+Y AN M + F NADG+ L+VPQ+GRL + TE G ++V P EIAV+P+G RF LPDG Sbjct: 22 YQSGFGNEFSTEALPGALPHGQNSPQKAPYGLYAEQISGTAFTAPRAHNRRSWLYRIRPGAVHLPFEAM--AQGRFHSHFNEVPP--SPNQLRWDPLPAPAAGTDFIDGIVTFAGNGGPDAQTGCGIHLYAANADMTDRFFYNADGELLIVPQQGRLRLLTEMGVVDVEPLEIAVIPRGVRFRVELPDG 206 HSP 2 Score: 23.0978 bits (48), Expect = 1.733e-52 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 681 GHPRGYIAESFGA 719 G RGYI E+FGA Sbjct: 206 GDARGYICENFGA 218
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_MYXXD (Homogentisate 1,2-dioxygenase OS=Myxococcus xanthus (strain DK 1622) GN=hmgA PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.012e-52 Identity = 104/190 (54.74%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVS-EFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682 Y SGFGN F++EA+ GALP GQNSP PFGLYAEQ+SG++FT+PR+ N+RSWLYR++PSA H F+P A G L S FD+ + +P +LRW P P PTDF+DGL T G G + G +IH+Y AN+SM + F +ADG+ L+VPQ GRL + TE G L+V+PGEIAV+P+G RF LP+G Sbjct: 14 YLSGFGNEFATEAVPGALPEGQNSPQRAPFGLYAEQLSGSAFTAPRRENRRSWLYRLRPSANHPAFQPL--AQGLLRSGPFDEVPA--SPNRLRWSPQPPPAQPTDFVDGLVTYAGNGDAASGAGISIHLYAANRSMVDRVFFDADGELLIVPQAGRLRLVTELGVLDVAPGEIAVVPRGVRFRAELPEG 199
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RALSO (Homogentisate 1,2-dioxygenase OS=Ralstonia solanacearum GN=hmgA PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 3.839e-52 Identity = 102/189 (53.97%), Postives = 131/189 (69.31%), Query Frame = 2 Query: 116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682 Y+SGFGN F++EA+ GALP GQNSP P+GLYAEQ+SGT+FT+PR N+R+WLYRI+P+A H PF+P A + S+F + +P QLRW P+ P + TDFIDG+ T G G + G IH+Y AN SM F NADG+ L+VPQ+GRL + TE G L+V P EIAV+P+G RF LPDG Sbjct: 22 YQSGFGNEFATEALPGALPHGQNSPQQAPYGLYAEQLSGTAFTAPRAHNRRAWLYRIRPAAVHLPFEPI--AQDRFHSDFHAVPA--SPNQLRWDPLPAPAAGTDFIDGIVTFAGNGGPDAQTGCGIHLYAANASMTGRFFYNADGELLIVPQQGRLRLLTELGVLDVEPLEIAVIPRGVRFRVELPDG 206 HSP 2 Score: 22.7126 bits (47), Expect = 3.839e-52 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 681 GHPRGYIAESFGA 719 G RGY+ E+FGA Sbjct: 206 GEARGYLCENFGA 218
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RALEJ (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain JMP134) GN=hmgA PE=3 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 1.109e-51 Identity = 99/189 (52.38%), Postives = 130/189 (68.78%), Query Frame = 2 Query: 116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682 Y SGF N F++EA+ GALP GQNSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P A H+PF + + +S FD+ +P Q+RW P +P +PTDFIDG+ T+ G G G IH+Y AN+SM + F NADG+ L+VPQ+GR+ TE G+L+V P EI V+P+G RF LPDG Sbjct: 13 YMSGFANEFATEALPGALPVGQNSPQRAPYGLYAEQLSGTAFTAPRAHNRRSWLYRIRPGAVHKPFT--LVEQSRFLSRFDEVPP--SPNQMRWSPPAMPTTPTDFIDGIVTMAGNGGPDAMTGCGIHLYLANQSMQDRFFYNADGEMLIVPQQGRVRFVTEMGRLDVEPQEIVVIPRGVRFRVELPDG 197 HSP 2 Score: 22.3274 bits (46), Expect = 1.109e-51 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 681 GHPRGYIAESFGA 719 G RGYI E++GA Sbjct: 197 GEARGYICENYGA 209
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RALEH (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hmgA PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.884e-51 Identity = 99/189 (52.38%), Postives = 129/189 (68.25%), Query Frame = 2 Query: 116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF + +S FD+ +P Q+RW P +P PTDF+DG+ T+ G G G IH+Y AN+SM + F NADG+ L+VPQ+GRL + TE G+LEV P EI V+P+G RF LPDG Sbjct: 13 YMSGFANEFATEALPGALPVGRNSPQCAPYGLYAEQLSGTAFTAPRAHNRRSWLYRIRPAAMHTPFTQI--EQSRFLSRFDQVPP--SPNQMRWSPPAMPSVPTDFVDGIVTMAGNGGPEAMTGCGIHLYLANQSMQDRFFYNADGEMLIVPQQGRLLMVTELGRLEVEPQEIVVIPRGVRFRVELPDG 197 HSP 2 Score: 22.3274 bits (46), Expect = 1.884e-51 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 681 GHPRGYIAESFGA 719 G RGYI E++GA Sbjct: 197 GEARGYICENYGA 209 The following BLAST results are available for this feature:
BLAST of EY686935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >EY686935 ID=EY686935; Name=EY686935; organism=Citrus sinensis; type=EST; length=826bpback to top |