EY686935

Overview
NameEY686935
Unique NameEY686935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_DICDI (Homogentisate 1,2-dioxygenase OS=Dictyostelium discoideum GN=hgd PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 5.524e-54
Identity = 107/195 (54.87%), Postives = 136/195 (69.74%), Query Frame = 2
Query:  107 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDI-PDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            D  Y+SGFGNSF SEAI G LP+G+N+P  CP  LYAEQ+SG +FT+PR   QRSWLYRI+PS  H P K   P    LV   D +N +  P QLRWKP  I  D P DF++GL TI GAG + +RHG AIH+YTA KSM+N +F N+DGDFL+VPQ+G L I TE G ++V  GEI V+ +G  F+ ++ +GP+
Sbjct:    7 DYEYQSGFGNSFESEAIKGTLPKGRNAPQNCPLDLYAEQLSGNAFTAPRHTQQRSWLYRIRPSVCHTPLK---PIDSGLVC--DLNNLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHASVRHGLAIHIYTATKSMENKSFYNSDGDFLIVPQQGTLDIQTEFGFMKVKSGEICVIQRGITFSVNV-EGPT 195          

HSP 2 Score: 23.483 bits (49), Expect = 5.524e-54
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 3
Query:  681 GHPRGYIAESFGAH 722
            G  RGYI E FG+H
Sbjct:  193 GPTRGYICEVFGSH 206          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BORPE (Homogentisate 1,2-dioxygenase OS=Bordetella pertussis GN=hmgA PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.294e-53
Identity = 100/190 (52.63%), Postives = 136/190 (71.58%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            L+Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P   H PF P   A  + +S+F +     TP QLRW P+ +PD+PTDFIDG++T  G G    + G  IH+Y AN+SM    F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R    L D
Sbjct:    3 LHYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLD 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BORPA (Homogentisate 1,2-dioxygenase OS=Bordetella parapertussis GN=hmgA PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.914e-53
Identity = 100/190 (52.63%), Postives = 135/190 (71.05%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            L Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P   H PF P   A  + +S+F +     TP QLRW P+ +PD+PTDFIDG++T  G G    + G  IH+Y AN+SM    F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R    L D
Sbjct:    3 LQYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLD 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BORBR (Homogentisate 1,2-dioxygenase OS=Bordetella bronchiseptica GN=hmgA PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.914e-53
Identity = 100/190 (52.63%), Postives = 135/190 (71.05%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            L Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P   H PF P   A  + +S+F +     TP QLRW P+ +PD+PTDFIDG++T  G G    + G  IH+Y AN+SM    F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R    L D
Sbjct:    3 LQYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLD 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_BORA1 (Homogentisate 1,2-dioxygenase OS=Bordetella avium (strain 197N) GN=hmgA PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.540e-52
Identity = 103/190 (54.21%), Postives = 131/190 (68.95%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            LNY+SGFGN+ ++EA+ GALP+G+NSP  CP+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P   H PF+P   A   L    D      TP QLRW P+ +P +PTDFIDG++T  G G    + G  IH+Y AN+SM    F NAD + L+VPQ GRL +ATE G L++ P EIAVLP+G RF   L D
Sbjct:    3 LNYQSGFGNACATEALPGALPQGRNSPQQCPYGLYAEQLSGTAFTAPRSENRRSWLYRIRPGVVHRPFEPYAGAPHWLA---DFGTGPVTPNQLRWSPLPLPATPTDFIDGVHTWGGNGGPDEQSGVGIHLYAANQSMKGRFFYNADAEMLLVPQLGRLRLATEMGLLDLEPLEIAVLPRGVRFRVELLD 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RALPJ (Homogentisate 1,2-dioxygenase OS=Ralstonia pickettii (strain 12J) GN=hmgA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.733e-52
Identity = 103/189 (54.50%), Postives = 130/189 (68.78%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y+SGFGN FS+EA+ GALP GQNSP   P+GLYAEQISGT+FT+PR  N+RSWLYRI+P A H PF+    A G+  S F++     +P QLRW P+  P + TDFIDG+ T  G G    + G  IH+Y AN  M +  F NADG+ L+VPQ+GRL + TE G ++V P EIAV+P+G RF   LPDG
Sbjct:   22 YQSGFGNEFSTEALPGALPHGQNSPQKAPYGLYAEQISGTAFTAPRAHNRRSWLYRIRPGAVHLPFEAM--AQGRFHSHFNEVPP--SPNQLRWDPLPAPAAGTDFIDGIVTFAGNGGPDAQTGCGIHLYAANADMTDRFFYNADGELLIVPQQGRLRLLTEMGVVDVEPLEIAVIPRGVRFRVELPDG 206          

HSP 2 Score: 23.0978 bits (48), Expect = 1.733e-52
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYI E+FGA
Sbjct:  206 GDARGYICENFGA 218          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_MYXXD (Homogentisate 1,2-dioxygenase OS=Myxococcus xanthus (strain DK 1622) GN=hmgA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.012e-52
Identity = 104/190 (54.74%), Postives = 135/190 (71.05%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVS-EFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGFGN F++EA+ GALP GQNSP   PFGLYAEQ+SG++FT+PR+ N+RSWLYR++PSA H  F+P   A G L S  FD+  +  +P +LRW P   P  PTDF+DGL T  G G +    G +IH+Y AN+SM +  F +ADG+ L+VPQ GRL + TE G L+V+PGEIAV+P+G RF   LP+G
Sbjct:   14 YLSGFGNEFATEAVPGALPEGQNSPQRAPFGLYAEQLSGSAFTAPRRENRRSWLYRLRPSANHPAFQPL--AQGLLRSGPFDEVPA--SPNRLRWSPQPPPAQPTDFVDGLVTYAGNGDAASGAGISIHLYAANRSMVDRVFFDADGELLIVPQAGRLRLVTELGVLDVAPGEIAVVPRGVRFRAELPEG 199          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RALSO (Homogentisate 1,2-dioxygenase OS=Ralstonia solanacearum GN=hmgA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 3.839e-52
Identity = 102/189 (53.97%), Postives = 131/189 (69.31%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y+SGFGN F++EA+ GALP GQNSP   P+GLYAEQ+SGT+FT+PR  N+R+WLYRI+P+A H PF+P   A  +  S+F    +  +P QLRW P+  P + TDFIDG+ T  G G    + G  IH+Y AN SM    F NADG+ L+VPQ+GRL + TE G L+V P EIAV+P+G RF   LPDG
Sbjct:   22 YQSGFGNEFATEALPGALPHGQNSPQQAPYGLYAEQLSGTAFTAPRAHNRRAWLYRIRPAAVHLPFEPI--AQDRFHSDFHAVPA--SPNQLRWDPLPAPAAGTDFIDGIVTFAGNGGPDAQTGCGIHLYAANASMTGRFFYNADGELLIVPQQGRLRLLTELGVLDVEPLEIAVIPRGVRFRVELPDG 206          

HSP 2 Score: 22.7126 bits (47), Expect = 3.839e-52
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGY+ E+FGA
Sbjct:  206 GEARGYLCENFGA 218          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RALEJ (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain JMP134) GN=hmgA PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.109e-51
Identity = 99/189 (52.38%), Postives = 130/189 (68.78%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGF N F++EA+ GALP GQNSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P A H+PF   +    + +S FD+     +P Q+RW P  +P +PTDFIDG+ T+ G G      G  IH+Y AN+SM +  F NADG+ L+VPQ+GR+   TE G+L+V P EI V+P+G RF   LPDG
Sbjct:   13 YMSGFANEFATEALPGALPVGQNSPQRAPYGLYAEQLSGTAFTAPRAHNRRSWLYRIRPGAVHKPFT--LVEQSRFLSRFDEVPP--SPNQMRWSPPAMPTTPTDFIDGIVTMAGNGGPDAMTGCGIHLYLANQSMQDRFFYNADGEMLIVPQQGRVRFVTEMGRLDVEPQEIVVIPRGVRFRVELPDG 197          

HSP 2 Score: 22.3274 bits (46), Expect = 1.109e-51
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYI E++GA
Sbjct:  197 GEARGYICENYGA 209          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RALEH (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hmgA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.884e-51
Identity = 99/189 (52.38%), Postives = 129/189 (68.25%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            Y SGF N F++EA+ GALP G+NSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H PF        + +S FD+     +P Q+RW P  +P  PTDF+DG+ T+ G G      G  IH+Y AN+SM +  F NADG+ L+VPQ+GRL + TE G+LEV P EI V+P+G RF   LPDG
Sbjct:   13 YMSGFANEFATEALPGALPVGRNSPQCAPYGLYAEQLSGTAFTAPRAHNRRSWLYRIRPAAMHTPFTQI--EQSRFLSRFDQVPP--SPNQMRWSPPAMPSVPTDFVDGIVTMAGNGGPEAMTGCGIHLYLANQSMQDRFFYNADGEMLIVPQQGRLLMVTELGRLEVEPQEIVVIPRGVRFRVELPDG 197          

HSP 2 Score: 22.3274 bits (46), Expect = 1.884e-51
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYI E++GA
Sbjct:  197 GEARGYICENYGA 209          
The following BLAST results are available for this feature:
BLAST of EY686935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
HGD_DICDI5.524e-5454.87Homogentisate 1,2-dioxygenase OS=Dictyostelium dis... [more]
HGD_BORPE5.294e-5352.63Homogentisate 1,2-dioxygenase OS=Bordetella pertus... [more]
HGD_BORPA6.914e-5352.63Homogentisate 1,2-dioxygenase OS=Bordetella parape... [more]
HGD_BORBR6.914e-5352.63Homogentisate 1,2-dioxygenase OS=Bordetella bronch... [more]
HGD_BORA11.540e-5254.21Homogentisate 1,2-dioxygenase OS=Bordetella avium ... [more]
HGD_RALPJ1.733e-5254.50Homogentisate 1,2-dioxygenase OS=Ralstonia pickett... [more]
HGD_MYXXD2.012e-5254.74Homogentisate 1,2-dioxygenase OS=Myxococcus xanthu... [more]
HGD_RALSO3.839e-5253.97Homogentisate 1,2-dioxygenase OS=Ralstonia solanac... [more]
HGD_RALEJ1.109e-5152.38Homogentisate 1,2-dioxygenase OS=Ralstonia eutroph... [more]
HGD_RALEH1.884e-5152.38Homogentisate 1,2-dioxygenase OS=Ralstonia eutroph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-030-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686935 ID=EY686935; Name=EY686935; organism=Citrus sinensis; type=EST; length=826bp
CCACCCGTCCGAGGATTGTTAGTGAGCTGCTGAGACACAAATGGAGAAGA
AGAGTCAACATCAATCATCATCATTAATCAGAAAAACGGACGGCGAAGAT
TTCTCTGATCTGAATTACGAGTCAGGATTCGGCAACAGCTTCTCGTCGGA
GGCGATCGACGGTGCGTTGCCACGTGGACAGAACAGCCCCCTCGTTTGTC
CGTTCGGTCTCTACGCCGAACAGATCTCCGGCACCTCCTTCACCTCCCCT
CGCAAGCTCAATCAACGCAGTTGGTTATACAGAATAAAACCTTCTGCAAC
ACATGAACCGTTTAAGCCTCGAGTGCCTGCTCATGGGAAGCTGGTGAGTG
AATTTGACAAGTCTAACAGTTACACTACGCCGACTCAGCTCCGGTGGAAG
CCGGTTGATATCCCTGATTCACCGACTGATTTTATTGACGGGTTGTACAC
GATATGTGGGGCTGGCAGCTCATTTCTTCGGCATGGATATGCTATTCACA
TGTACACTGCCAACAAATCAATGGACAACTGTGCCTTCTGTAATGCTGAT
GGAGATTTTTTGGTAGTTCCCCAAAAAGGAAGGCTGTGGATTGCTACTGA
ATGTGGAAAACTGGAAGTCTCTCCTGGCGAAATTGCCGTTTTACCTCAAG
GGTTTCGTTTTGCTGGAAGTTTACCAGATGGGCCATCCCCGTGGTTACAT
CGCCGAGAGTTTTGGGGCCCATGTTCCGGCTTCCTGATGTTGGCCCGCGA
CGGGGCGATGGTCGGGGTGGGCCGAAAGAGTGCCTGGGGCCGACGGGCGG
GCCCGTGAGAGGGCCCCCGGCTAGAG
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