EY686935

Overview
NameEY686935
Unique NameEY686935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_CAUSK (Homogentisate 1,2-dioxygenase OS=Caulobacter sp. (strain K31) GN=hmgA PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.955e-51
Identity = 101/197 (51.27%), Postives = 133/197 (67.51%), Query Frame = 2
Query:  107 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY----TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGP 685
            DL Y+SGF N FS+EA+ GALP GQNSP   P+GLYAEQ+SGT+FT+PR  N+RSWLYR++PSA H P+ P        V E  KS  +     TP +LRW P++IP++P DF+DGL T+ G G    + G A H+Y AN+SM +  F NADG+ L+VPQ G L   TE G ++ +PGE+ V+P+G RF   L +GP
Sbjct:    2 DLQYQSGFANHFSTEAVPGALPVGQNSPQAPPYGLYAEQLSGTAFTAPRHENRRSWLYRLRPSAGHGPYAP-------YVQERLKSGPFGAAVPTPNRLRWDPLEIPEAPLDFVDGLVTLAGNGDVATQAGMAAHLYLANRSMIDRVFQNADGELLIVPQLGALRFVTELGVIDAAPGEVVVIPRGVRFRVEL-EGP 190          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_DROME (Homogentisate 1,2-dioxygenase OS=Drosophila melanogaster GN=hgo PE=1 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 8.452e-51
Identity = 106/200 (53.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query:  104 SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSP---TDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            S+  Y SGFG+ FSSE      +LP GQNSP VCP+ LYAEQ+SG++FT+PR  N R+WLYR  PSA H PF+P   A       +D+      P QLRWKP D+P       +F++GL+T+CGAG    RHG AIH+Y+ N SMDN AF N+DGDFL+VPQ+G L I TE G++ V+P EI V+PQG RFA ++ D PS
Sbjct:    2 SEYKYLSGFGSHFSSEDERYPNSLPVGQNSPQVCPYKLYAEQLSGSAFTAPRTENMRTWLYRKLPSAAHLPFQPFKGAE-YFSQNWDEQPP--NPNQLRWKPFDLPPKDGKNVNFVEGLHTVCGAGDPRSRHGLAIHIYSCNGSMDNSAFYNSDGDFLIVPQQGVLDITTEFGRMSVAPNEICVIPQGIRFAVNV-DSPS 197          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_CAUCR (Homogentisate 1,2-dioxygenase OS=Caulobacter crescentus GN=hmgA PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.345e-50
Identity = 99/194 (51.03%), Postives = 132/194 (68.04%), Query Frame = 2
Query:  107 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            DL Y++GFG+ F +EA  GALP G+NSP   PFGLYAEQ+SG++FT+PR  N+R+WLYR++PSA HE ++P   A  KLVS F       TP +LRW P++IP +PTDF+DGL ++ G   +    G A H+Y  N SM N  F NADG+ L+VPQ G L + TE G L+  PG IAV+P+G RF   + +GP+
Sbjct:    2 DLRYQTGFGSYFETEAHPGALPVGRNSPQKVPFGLYAEQLSGSAFTAPRHENRRTWLYRLRPSAGHEAYQPY--AQDKLVSAFPGP---ATPNRLRWSPLEIPAAPTDFVDGLVSLAGNADAATLGGIAAHVYLVNVSMKNRVFYNADGEMLIVPQMGELTLVTEMGVLKAGPGHIAVIPRGVRFRVEV-EGPA 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_CAUCN (Homogentisate 1,2-dioxygenase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=hmgA PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.345e-50
Identity = 99/194 (51.03%), Postives = 132/194 (68.04%), Query Frame = 2
Query:  107 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            DL Y++GFG+ F +EA  GALP G+NSP   PFGLYAEQ+SG++FT+PR  N+R+WLYR++PSA HE ++P   A  KLVS F       TP +LRW P++IP +PTDF+DGL ++ G   +    G A H+Y  N SM N  F NADG+ L+VPQ G L + TE G L+  PG IAV+P+G RF   + +GP+
Sbjct:    2 DLRYQTGFGSYFETEAHPGALPVGRNSPQKVPFGLYAEQLSGSAFTAPRHENRRTWLYRLRPSAGHEAYQPY--AQDKLVSAFPGP---ATPNRLRWSPLEIPAAPTDFVDGLVSLAGNADAATLGGIAAHVYLVNVSMKNRVFYNADGEMLIVPQMGELTLVTEMGVLKAGPGHIAVIPRGVRFRVEV-EGPA 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_MOUSE (Homogentisate 1,2-dioxygenase OS=Mus musculus GN=Hgd PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.719e-49
Identity = 96/192 (50.00%), Postives = 130/192 (67.71%), Query Frame = 2
Query:  104 SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIP---DSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFA 664
            ++L Y SGFGN  +SE     G+LP+GQN+P VCP+ LYAEQ+SG++FT PR  N+RSWLYRI PS +H+PF+     H  +   +D+      P QLRWKP +IP   +   DF+ GLYT+CGAG     +G A+H++  N SM+N  F N+DGDFL+VPQKG+L I TE GK+ + P EI V+ +G RF+
Sbjct:    2 AELKYISGFGNECASEDPRCPGSLPKGQNNPQVCPYNLYAEQLSGSAFTCPRNTNKRSWLYRILPSVSHKPFESIDQGH--VTHNWDEVGP--DPNQLRWKPFEIPKASEKKVDFVSGLYTLCGAGDIKSNNGLAVHIFLCNSSMENRCFYNSDGDFLIVPQKGKLLIYTEFGKMSLQPNEICVIQRGMRFS 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_XANCP (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. campestris GN=hmgA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.089e-48
Identity = 99/202 (49.01%), Postives = 128/202 (63.37%), Query Frame = 2
Query:   89 DGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY----TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            D    +D  Y +GFGN F+SEA+   LP GQNSP     GLYAEQ+SGT+FT+PR  N+RSWLYR++P+A H  F         L+ +    N +      P QLRW P+ +P +PTDFIDGLYT+ G GS    +G A+H+Y AN SM +  F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF   L DG
Sbjct:   19 DAPMHNDQRYMTGFGNEFASEAVADTLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRMRPAAVHGTFS--------LIEQSQFHNDFGHGPVPPDQLRWSPLPLPQTPTDFIDGLYTMAGNGSPEAMNGVAVHLYAANASMQDRFFYNADGELLLVPQLGRLRVHTELGMLELEPQQIGVIPRGVRFRVELRDG 212          

HSP 2 Score: 21.9422 bits (45), Expect = 1.089e-48
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  681 GHPRGYIAESFGA--HVP 728
            G  RGY+ E+FG   H+P
Sbjct:  212 GTARGYVCENFGGLLHLP 229          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_XANC8 (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=hmgA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.089e-48
Identity = 99/202 (49.01%), Postives = 128/202 (63.37%), Query Frame = 2
Query:   89 DGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY----TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            D    +D  Y +GFGN F+SEA+   LP GQNSP     GLYAEQ+SGT+FT+PR  N+RSWLYR++P+A H  F         L+ +    N +      P QLRW P+ +P +PTDFIDGLYT+ G GS    +G A+H+Y AN SM +  F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF   L DG
Sbjct:   19 DAPMHNDQRYMTGFGNEFASEAVADTLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRMRPAAVHGTFS--------LIEQSQFHNDFGHGPVPPDQLRWSPLPLPQTPTDFIDGLYTMAGNGSPEAMNGVAVHLYAANASMQDRFFYNADGELLLVPQLGRLRVHTELGMLELEPQQIGVIPRGVRFRVELRDG 212          

HSP 2 Score: 21.9422 bits (45), Expect = 1.089e-48
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  681 GHPRGYIAESFGA--HVP 728
            G  RGY+ E+FG   H+P
Sbjct:  212 GTARGYVCENFGGLLHLP 229          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_HUMAN (Homogentisate 1,2-dioxygenase OS=Homo sapiens GN=HGD PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.762e-48
Identity = 98/192 (51.04%), Postives = 129/192 (67.19%), Query Frame = 2
Query:  104 SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSP---TDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFA 664
            ++L Y SGFGN  SSE     G+LP GQN+P VCP+ LYAEQ+SG++FT PR  N+RSWLYRI PS +H+PF+     H  +   +D+ +    P QLRWKP +IP +     DF+ GL+T+CGAG     +G AIH++  N SM+N  F N+DGDFL+VPQKG L I TE GK+ V P EI V+ +G RF+
Sbjct:    2 AELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDEGH--VTHNWDEVDP--DPNQLRWKPFEIPKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFS 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PONAB (Homogentisate 1,2-dioxygenase OS=Pongo abelii GN=HGD PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.142e-47
Identity = 97/192 (50.52%), Postives = 126/192 (65.62%), Query Frame = 2
Query:  104 SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIP---DSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFA 664
            + L Y SGFGN  SSE     G+LP GQN+P VCP+ LYAEQ+SG++FT PR  N+RSWLYRI PS +H+PF+     H  +   +D+ +    P QLRWKP +IP       D + GL+T+CGAG     +G AIH++  N SM+N  F N+DGDFL+VPQKG L I TE GK+ V P EI V+ +G RF+
Sbjct:    2 AQLKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRIPPSVSHKPFESIDEGH--VTHNWDEVDP--DPNQLRWKPFEIPKVSQKKVDLVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFS 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_XANOP (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hmgA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.324e-47
Identity = 95/189 (50.26%), Postives = 126/189 (66.67%), Query Frame = 2
Query:  113 NYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            +Y +GFGN F++EA+ G+LP GQNSP     GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H  F   +    +L ++F        P Q+RW P+ +P +PTDF+DGLYT+ G GS     G A+H+Y AN SM    F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF   L D
Sbjct:    6 HYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFS--LIEQSRLHNDF--GGGPVPPDQMRWSPLPLPATPTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMHGRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQIGVIPRGVRFRVELLD 190          
The following BLAST results are available for this feature:
BLAST of EY686935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
HGD_CAUSK4.955e-5151.27Homogentisate 1,2-dioxygenase OS=Caulobacter sp. (... [more]
HGD_DROME8.452e-5153.00Homogentisate 1,2-dioxygenase OS=Drosophila melano... [more]
HGD_CAUCR9.345e-5051.03Homogentisate 1,2-dioxygenase OS=Caulobacter cresc... [more]
HGD_CAUCN9.345e-5051.03Homogentisate 1,2-dioxygenase OS=Caulobacter cresc... [more]
HGD_MOUSE2.719e-4950.00Homogentisate 1,2-dioxygenase OS=Mus musculus GN=H... [more]
HGD_XANCP1.089e-4849.01Homogentisate 1,2-dioxygenase OS=Xanthomonas campe... [more]
HGD_XANC81.089e-4849.01Homogentisate 1,2-dioxygenase OS=Xanthomonas campe... [more]
HGD_HUMAN1.762e-4851.04Homogentisate 1,2-dioxygenase OS=Homo sapiens GN=H... [more]
HGD_PONAB1.142e-4750.52Homogentisate 1,2-dioxygenase OS=Pongo abelii GN=H... [more]
HGD_XANOP3.324e-4750.26Homogentisate 1,2-dioxygenase OS=Xanthomonas oryza... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-030-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686935 ID=EY686935; Name=EY686935; organism=Citrus sinensis; type=EST; length=826bp
CCACCCGTCCGAGGATTGTTAGTGAGCTGCTGAGACACAAATGGAGAAGA
AGAGTCAACATCAATCATCATCATTAATCAGAAAAACGGACGGCGAAGAT
TTCTCTGATCTGAATTACGAGTCAGGATTCGGCAACAGCTTCTCGTCGGA
GGCGATCGACGGTGCGTTGCCACGTGGACAGAACAGCCCCCTCGTTTGTC
CGTTCGGTCTCTACGCCGAACAGATCTCCGGCACCTCCTTCACCTCCCCT
CGCAAGCTCAATCAACGCAGTTGGTTATACAGAATAAAACCTTCTGCAAC
ACATGAACCGTTTAAGCCTCGAGTGCCTGCTCATGGGAAGCTGGTGAGTG
AATTTGACAAGTCTAACAGTTACACTACGCCGACTCAGCTCCGGTGGAAG
CCGGTTGATATCCCTGATTCACCGACTGATTTTATTGACGGGTTGTACAC
GATATGTGGGGCTGGCAGCTCATTTCTTCGGCATGGATATGCTATTCACA
TGTACACTGCCAACAAATCAATGGACAACTGTGCCTTCTGTAATGCTGAT
GGAGATTTTTTGGTAGTTCCCCAAAAAGGAAGGCTGTGGATTGCTACTGA
ATGTGGAAAACTGGAAGTCTCTCCTGGCGAAATTGCCGTTTTACCTCAAG
GGTTTCGTTTTGCTGGAAGTTTACCAGATGGGCCATCCCCGTGGTTACAT
CGCCGAGAGTTTTGGGGCCCATGTTCCGGCTTCCTGATGTTGGCCCGCGA
CGGGGCGATGGTCGGGGTGGGCCGAAAGAGTGCCTGGGGCCGACGGGCGG
GCCCGTGAGAGGGCCCCCGGCTAGAG
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