EY686935

Overview
NameEY686935
Unique NameEY686935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_XANOM (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hmgA PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.324e-47
Identity = 95/189 (50.26%), Postives = 126/189 (66.67%), Query Frame = 2
Query:  113 NYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            +Y +GFGN F++EA+ G+LP GQNSP     GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H  F   +    +L ++F        P Q+RW P+ +P +PTDF+DGLYT+ G GS     G A+H+Y AN SM    F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF   L D
Sbjct:    6 HYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFS--LIEQSRLHNDF--GGGPVPPDQMRWSPLPLPATPTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMHGRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQIGVIPRGVRFRVELLD 190          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_XANOR (Homogentisate 1,2-dioxygenase OS=Xanthomonas oryzae pv. oryzae GN=hmgA PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.341e-47
Identity = 94/189 (49.74%), Postives = 126/189 (66.67%), Query Frame = 2
Query:  113 NYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            +Y +GFGN F++EA+ G+LP GQNSP     GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H  F   +    +L ++F        P Q+RW P+ +P +PTDF+DGLYT+ G GS     G A+H+Y AN SM    F NADG+ L+VPQ GRL + TE G LE+ P ++ V+P+G RF   L D
Sbjct:    6 HYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFS--LIEQSRLHNDF--GGGPVPPDQMRWSPLPLPATPTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMHGRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQVGVIPRGVRFRVELLD 190          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_CAEEL (Homogentisate 1,2-dioxygenase OS=Caenorhabditis elegans GN=hgo-1 PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.341e-47
Identity = 99/200 (49.50%), Postives = 126/200 (63.00%), Query Frame = 2
Query:   98 DFSDLNYESGFGNSF--SSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSP-TDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            +F +L Y +GFGN    S   +  ALP GQNSP  C  GLYAEQ+SGT+FT+PR  NQRSWLYRI+PS  H PF+          + F  S+    P Q RW P  +P      F+D LYT+CG G    R G AIH ++ N SM++ A  N+DGDFL+VPQ+G L I TE G+L V+P EIAV+PQG RF+ ++  GPS
Sbjct:    3 EFDELKYLTGFGNEHATSDPRVPDALPVGQNSPQKCSHGLYAEQLSGTAFTAPRSQNQRSWLYRIRPSVIHRPFEAMKENDQHWTNNF--SSIPPNPNQYRWNPFPLPTKEGVTFVDNLYTVCGGGDVISRTGLAIHQFSCNASMEHTAMYNSDGDFLIVPQQGALEITTEFGRLLVNPQEIAVIPQGIRFSVAV-RGPS 199          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEPW (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain W619) GN=hmgA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.672e-46
Identity = 98/194 (50.52%), Postives = 127/194 (65.46%), Query Frame = 2
Query:  107 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            DL Y SGFGN F+SEA+ GALP GQNSP   P+GLYAE +SGT+FT  R   +R+WLYRI+PSA H  F+   R P +G L           TP +LRW P  +P  PTDFI+G   +    ++    G ++++Y AN+SM+   F NADG+ L+VP++GRL IATE G LEV P EIAV+P+G +F   LPDG
Sbjct:    8 DLQYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPSALHPRFERLARQPLNGPL--------GGVTPNRLRWNPQPLPTEPTDFIEGWLPMVANSAADKPAGVSVYIYCANRSMER-VFFNADGELLIVPEQGRLRIATELGLLEVEPQEIAVVPRGMKFRVELPDG 192          

HSP 2 Score: 22.3274 bits (46), Expect = 1.672e-46
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYIAE+ GA
Sbjct:  192 GQARGYIAENHGA 204          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_XANC5 (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hmgA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.814e-46
Identity = 94/189 (49.74%), Postives = 126/189 (66.67%), Query Frame = 2
Query:  113 NYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            +Y +GFGN F++EA+ G+LP GQNSP     GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H  F   +    +L ++F        P Q+RW P+ +P + TDF+DGLYT+ G GS     G A+H+Y AN SM +  F NADG+ L+VPQ GRL + TE G LE+ P +I V+P+G RF   L D
Sbjct:    8 SYMTGFGNEFATEAVAGSLPVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRIRPAAVHGRFS--LIEQSRLHNDF--GGGPVPPDQMRWSPLPLPATRTDFVDGLYTMAGNGSPEAMTGVAVHLYAANASMRDRFFYNADGELLLVPQLGRLRVCTELGVLELEPQQIGVIPRGLRFRVELLD 192          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_XANAC (Homogentisate 1,2-dioxygenase OS=Xanthomonas axonopodis pv. citri GN=hmgA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.675e-46
Identity = 94/197 (47.72%), Postives = 123/197 (62.44%), Query Frame = 2
Query:   89 DGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            D    +D  Y +GFGN F++EA+ G+LP GQNSP     GLYAEQ+SGT+FT+PR  N+RSWLYRI+P+A H  F     +H       D       P QLRW P+ +P  PTDF+DGLYT+ G G      G  +H+Y AN SM +  F +ADG+ L+VPQ+GRL + TE G L + P +I V+P+G RF   L D
Sbjct:   19 DAPMHNDQRYMTGFGNEFATEAVAGSLPIGQNSPQRVAHGLYAEQLSGTAFTAPRGQNRRSWLYRIRPAAVHGSFSLVEQSH----FHNDFGAGPVPPDQLRWSPLPLPSVPTDFVDGLYTMAGNGGPEAMSGVGVHVYAANASMQDRFFYDADGELLLVPQQGRLRVHTELGVLALEPQQIGVIPRGMRFRVELLD 211          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEAE (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa GN=hmgA PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.392e-45
Identity = 98/197 (49.75%), Postives = 126/197 (63.96%), Query Frame = 2
Query:   98 DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            D + L Y+SGFGN FSSEA+ GALP GQNSP   P+GLYAE +SGT+FT  R   +R+WLYRI PSA H PF+   R  A  +L           TP +LRW P+ +P+ PTDF+DGL  +          G +I+ Y AN+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F   L DG
Sbjct:    4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAEL--------DAPTPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDG 191          

HSP 2 Score: 22.3274 bits (46), Expect = 1.392e-45
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYIAE+ GA
Sbjct:  191 GEARGYIAENHGA 203          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEAB (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hmgA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.392e-45
Identity = 98/197 (49.75%), Postives = 126/197 (63.96%), Query Frame = 2
Query:   98 DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            D + L Y+SGFGN FSSEA+ GALP GQNSP   P+GLYAE +SGT+FT  R   +R+WLYRI PSA H PF+   R  A  +L           TP +LRW P+ +P+ PTDF+DGL  +          G +I+ Y AN+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F   L DG
Sbjct:    4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAEL--------DAPTPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDG 191          

HSP 2 Score: 22.3274 bits (46), Expect = 1.392e-45
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYIAE+ GA
Sbjct:  191 GEARGYIAENHGA 203          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEA8 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain LESB58) GN=hmgA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.392e-45
Identity = 98/197 (49.75%), Postives = 126/197 (63.96%), Query Frame = 2
Query:   98 DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            D + L Y+SGFGN FSSEA+ GALP GQNSP   P+GLYAE +SGT+FT  R   +R+WLYRI PSA H PF+   R  A  +L           TP +LRW P+ +P+ PTDF+DGL  +          G +I+ Y AN+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F   L DG
Sbjct:    4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAEL--------DAPTPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDG 191          

HSP 2 Score: 22.3274 bits (46), Expect = 1.392e-45
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYIAE+ GA
Sbjct:  191 GEARGYIAENHGA 203          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEA7 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain PA7) GN=hmgA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.392e-45
Identity = 98/197 (49.75%), Postives = 126/197 (63.96%), Query Frame = 2
Query:   98 DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            D + L Y+SGFGN FSSEA+ GALP GQNSP   P+GLYAE +SGT+FT  R   +R+WLYRI PSA H PF+   R  A  +L           TP +LRW P+ +P+ PTDF+DGL  +          G +I+ Y AN+SM+ C F +ADG+ L+VPQ GRL + TE G L+V P EIAV+P+G +F   L DG
Sbjct:    4 DSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAEL--------DAPTPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERC-FYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDG 191          

HSP 2 Score: 22.3274 bits (46), Expect = 1.392e-45
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYIAE+ GA
Sbjct:  191 GEARGYIAENHGA 203          
The following BLAST results are available for this feature:
BLAST of EY686935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
HGD_XANOM3.324e-4750.26Homogentisate 1,2-dioxygenase OS=Xanthomonas oryza... [more]
HGD_XANOR4.341e-4749.74Homogentisate 1,2-dioxygenase OS=Xanthomonas oryza... [more]
HGD_CAEEL4.341e-4749.50Homogentisate 1,2-dioxygenase OS=Caenorhabditis el... [more]
HGD_PSEPW1.672e-4650.52Homogentisate 1,2-dioxygenase OS=Pseudomonas putid... [more]
HGD_XANC52.814e-4649.74Homogentisate 1,2-dioxygenase OS=Xanthomonas campe... [more]
HGD_XANAC3.675e-4647.72Homogentisate 1,2-dioxygenase OS=Xanthomonas axono... [more]
HGD_PSEAE1.392e-4549.75Homogentisate 1,2-dioxygenase OS=Pseudomonas aerug... [more]
HGD_PSEAB1.392e-4549.75Homogentisate 1,2-dioxygenase OS=Pseudomonas aerug... [more]
HGD_PSEA81.392e-4549.75Homogentisate 1,2-dioxygenase OS=Pseudomonas aerug... [more]
HGD_PSEA71.392e-4549.75Homogentisate 1,2-dioxygenase OS=Pseudomonas aerug... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-030-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686935 ID=EY686935; Name=EY686935; organism=Citrus sinensis; type=EST; length=826bp
CCACCCGTCCGAGGATTGTTAGTGAGCTGCTGAGACACAAATGGAGAAGA
AGAGTCAACATCAATCATCATCATTAATCAGAAAAACGGACGGCGAAGAT
TTCTCTGATCTGAATTACGAGTCAGGATTCGGCAACAGCTTCTCGTCGGA
GGCGATCGACGGTGCGTTGCCACGTGGACAGAACAGCCCCCTCGTTTGTC
CGTTCGGTCTCTACGCCGAACAGATCTCCGGCACCTCCTTCACCTCCCCT
CGCAAGCTCAATCAACGCAGTTGGTTATACAGAATAAAACCTTCTGCAAC
ACATGAACCGTTTAAGCCTCGAGTGCCTGCTCATGGGAAGCTGGTGAGTG
AATTTGACAAGTCTAACAGTTACACTACGCCGACTCAGCTCCGGTGGAAG
CCGGTTGATATCCCTGATTCACCGACTGATTTTATTGACGGGTTGTACAC
GATATGTGGGGCTGGCAGCTCATTTCTTCGGCATGGATATGCTATTCACA
TGTACACTGCCAACAAATCAATGGACAACTGTGCCTTCTGTAATGCTGAT
GGAGATTTTTTGGTAGTTCCCCAAAAAGGAAGGCTGTGGATTGCTACTGA
ATGTGGAAAACTGGAAGTCTCTCCTGGCGAAATTGCCGTTTTACCTCAAG
GGTTTCGTTTTGCTGGAAGTTTACCAGATGGGCCATCCCCGTGGTTACAT
CGCCGAGAGTTTTGGGGCCCATGTTCCGGCTTCCTGATGTTGGCCCGCGA
CGGGGCGATGGTCGGGGTGGGCCGAAAGAGTGCCTGGGGCCGACGGGCGG
GCCCGTGAGAGGGCCCCCGGCTAGAG
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