EY686935

Overview
NameEY686935
Unique NameEY686935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSESM (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. tomato GN=hmgA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.051e-45
Identity = 96/194 (49.48%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  101 FSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            F  L Y+SGF N FSSEA+ GALP GQNSP   P GLYAEQ SGT+FT  R   +R+WLYRIKPSA H    PR     + ++   +      P +LRW   DIP  P DFIDGL  +    ++    G ++++Y AN SM   AF +ADG++L+VPQ+GRL I TE G L++ P EIAVLP+G +F+  L DG
Sbjct:    7 FEALAYQSGFANQFSSEALPGALPMGQNSPQKHPLGLYAEQFSGTAFTVARNEARRTWLYRIKPSAAH----PRYQRMDRQIT--GREQGPINPNRLRWNAFDIPAEPVDFIDGLIALASTSAADQAEGVSVYVYAANTSMQR-AFFSADGEWLIVPQQGRLRIITEMGVLDIGPLEIAVLPRGLKFSVQLLDG 193          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEPF (Homogentisate 1,2-dioxygenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hmgA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.182e-44
Identity = 100/194 (51.55%), Postives = 124/194 (63.92%), Query Frame = 2
Query:  104 SDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPF--KPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            S L Y+SGFGN FSSEA+ GALP GQNSP   P+GLY E  SGT+FT  R   +R+W+YRI+PSA H  F    R  A G L           TP +LRW P+D+P  PTDFIDGL ++     +    G +I+ Y AN+SM+   F NADG+ L+VPQ GRL IATE G L+V+P EIAVLP+G +F   L D
Sbjct:    5 SALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYTELFSGTAFTMTRSEARRTWMYRIQPSANHPAFVKLERQLAGGPL--------GEVTPNRLRWNPLDLPTEPTDFIDGLVSMAANSGADKPAGISIYHYGANRSMER-VFFNADGELLLVPQLGRLRIATELGVLDVAPLEIAVLPRGLKFRVELLD 189          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_STRCO (Homogentisate 1,2-dioxygenase OS=Streptomyces coelicolor GN=hmgA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.544e-44
Identity = 90/190 (47.37%), Postives = 121/190 (63.68%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            L Y SGFGN  +SEA+ GALP G+NSP   P GLYAEQ+SGT+FT PR  N+RSWLYRI+PSA H  F     +    +     + +   P +LRW P+ +P   TDF++GL+T+ G G +  R G A+H+Y A  SMD   F +ADG+ L+VP++G L + TE G L   PG +A++P+G RF   L D
Sbjct:   12 LAYLSGFGNEHASEAVAGALPEGRNSPQRAPLGLYAEQLSGTAFTEPRAHNRRSWLYRIRPSAAHPAF---TRSGNGTIRTAPFNQAVPDPNRLRWNPLPVPGPATDFVEGLWTLGGNGDATQRTGMAVHLYHATASMDR-VFSDADGELLIVPERGGLLLRTEFGLLHAEPGHVALIPRGVRFRVQLLD 197          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_STRAW (Homogentisate 1,2-dioxygenase OS=Streptomyces avermitilis GN=hmgA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.544e-44
Identity = 90/190 (47.37%), Postives = 123/190 (64.74%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            L + +GFGN  +SEA+ GALP G+NSP   P GLYAEQ+SG++FT PR  N+RSWLYRI+PSA H PF     A    +     + +   P +LRW P+  P + TDF+ GL+T+ G G +  R G A+H+Y AN SMD   F +ADG+ L+VP++G L + TE G L   PG++A++P+G RF   L D
Sbjct:   12 LAHLTGFGNEHASEAVPGALPEGRNSPQRAPLGLYAEQLSGSAFTEPRAHNRRSWLYRIRPSAAHPPF---TRADNGAIRTAPFTETAPDPNRLRWNPLPEPPAGTDFVGGLWTLGGNGDATQRTGMAVHLYHANSSMDR-VFSDADGELLIVPERGGLLLRTEFGLLHAEPGQVALVPRGVRFRVDLLD 197          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSE14 (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=hmgA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.634e-44
Identity = 96/190 (50.53%), Postives = 122/190 (64.21%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            L Y+SGFGN FSSEA+ GALP GQNSP   P GLYAEQ SGT+FT  R   +R+WLYRIKPSA H    PR    G+ ++   +      P +LRW   DIP  P DFIDGL  +    ++    G ++++Y AN SM   AF +ADG++L+VPQ+GRL I TE G L++ P EIAVLP+G +F   L D
Sbjct:   10 LAYQSGFGNQFSSEALPGALPIGQNSPQKHPLGLYAEQFSGTAFTVARSEARRTWLYRIKPSAAH----PRYQRMGRQIA--GQEQGPINPNRLRWNAFDIPAEPVDFIDGLIPLASTSAADQADGVSVYVYAANTSMQR-AFFSADGEWLIVPQQGRLRIITELGLLDIEPLEIAVLPRGMKFRVQLLD 192          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEPG (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain GB-1) GN=hmgA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.339e-44
Identity = 97/194 (50.00%), Postives = 125/194 (64.43%), Query Frame = 2
Query:  107 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            DL+Y SGFGN F+SEA+ GALP GQNSP   P+GLYAE +SGT+FT  R   +R+WLYRI+PSA H  F+   R P  G L            P +LRW P  IP  PTDFI+G   +    ++    G +I++Y AN+SM+   F NADG+ L+VP++GRL IATE G +EV P EIAV+P+G +F   L DG
Sbjct:    8 DLHYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPSALHPRFERLARQPLSGPL--------GGINPNRLRWSPQPIPAEPTDFIEGWLPMVANAAAEKPAGVSIYIYRANRSMER-VFFNADGELLLVPEQGRLRIATELGVMEVEPLEIAVIPRGMKFRVELLDG 192          

HSP 2 Score: 22.3274 bits (46), Expect = 3.339e-44
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYIAE+ GA
Sbjct:  192 GQARGYIAENHGA 204          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEP1 (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hmgA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.339e-44
Identity = 97/194 (50.00%), Postives = 125/194 (64.43%), Query Frame = 2
Query:  107 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            DL+Y SGFGN F+SEA+ GALP GQNSP   P+GLYAE +SGT+FT  R   +R+WLYRI+PSA H  F+   R P  G L            P +LRW P  IP  PTDFI+G   +    ++    G +I++Y AN+SM+   F NADG+ L+VP++GRL IATE G +EV P EIAV+P+G +F   L DG
Sbjct:    8 DLHYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPSALHPRFERLARQPLGGPL--------GGINPNRLRWSPQPIPAEPTDFIEGWLPMAANAAAEKPAGVSIYIYCANRSMER-VFFNADGELLLVPEQGRLRIATELGVMEVEPLEIAVIPRGMKFRVELLDG 192          

HSP 2 Score: 22.3274 bits (46), Expect = 3.339e-44
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYIAE+ GA
Sbjct:  192 GQARGYIAENHGA 204          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEPK (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain KT2440) GN=hmgA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.352e-44
Identity = 97/194 (50.00%), Postives = 124/194 (63.92%), Query Frame = 2
Query:  107 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDG 682
            DL+Y SGFGN F+SEA+ GALP GQNSP   P+GLYAE +SGT+FT  R   +R+WLYRI+PSA H  F+   R P  G L            P +LRW P  IP  PTDFI+G   +     +    G +I++Y AN+SM+   F NADG+ L+VP++GRL IATE G +EV P EIAV+P+G +F   L DG
Sbjct:    8 DLHYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSELRRTWLYRIRPSALHPRFERLARQPLGGPL--------GGINPNRLRWSPQPIPAEPTDFIEGWLPMAANAGAEKPAGVSIYIYRANRSMER-VFFNADGELLLVPEQGRLRIATELGVMEVEPLEIAVIPRGMKFRVELLDG 192          

HSP 2 Score: 22.3274 bits (46), Expect = 4.352e-44
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  681 GHPRGYIAESFGA 719
            G  RGYIAE+ GA
Sbjct:  192 GQARGYIAENHGA 204          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEF5 (Homogentisate 1,2-dioxygenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hmgA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.001e-43
Identity = 95/193 (49.22%), Postives = 123/193 (63.73%), Query Frame = 2
Query:  104 SDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSN-SYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            S L+Y+SGFGN F+SEA+ GALP GQNSP   P+GLYAE  SGT+FT  R   +R+W+YRI+PSA H       PA  KL  +         TP +LRW P+ IP  PTDFIDGL  +    ++    G +++ Y AN+SM+   F NADG+ L+VP+ GRL I TE G L++ P EIAVLP+G +F   L D
Sbjct:    8 SALSYQSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELFSGTAFTMTRSEARRTWMYRIQPSAKH-------PAFAKLARQLAGGPLGEVTPNRLRWSPLQIPSEPTDFIDGLVAMVANSAAQKPAGISVYHYRANRSMER-VFFNADGELLLVPELGRLRIVTELGMLDLEPLEIAVLPRGLKFRIELLD 192          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_PSEU2 (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hmgA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.912e-43
Identity = 96/190 (50.53%), Postives = 122/190 (64.21%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPD 679
            L Y+SGFGN FSSEA+  ALP GQNSP   P GLYAEQ SGT+FT  R   +R+WLYRIKPSA H  ++ R+           +      P +LRW   DIP +PTDFIDGL  +    ++    G ++++YTAN SM   AF +ADG++LVVPQ+GRL I TE G L++ P EIAVLP+G +F   L D
Sbjct:   10 LVYQSGFGNQFSSEALPDALPVGQNSPQKHPLGLYAEQFSGTAFTVARSEARRTWLYRIKPSAAHSRYQ-RMDR-----QMAGQEPGPINPNRLRWNAFDIPAAPTDFIDGLIPLASTSAAEQAEGVSVYLYTANTSMQR-AFFSADGEWLVVPQQGRLRIVTELGLLDIEPLEIAVLPRGLKFCVQLLD 192          
The following BLAST results are available for this feature:
BLAST of EY686935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
HGD_PSESM9.051e-4549.48Homogentisate 1,2-dioxygenase OS=Pseudomonas syrin... [more]
HGD_PSEPF1.182e-4451.55Homogentisate 1,2-dioxygenase OS=Pseudomonas fluor... [more]
HGD_STRCO1.544e-4447.37Homogentisate 1,2-dioxygenase OS=Streptomyces coel... [more]
HGD_STRAW1.544e-4447.37Homogentisate 1,2-dioxygenase OS=Streptomyces aver... [more]
HGD_PSE142.634e-4450.53Homogentisate 1,2-dioxygenase OS=Pseudomonas syrin... [more]
HGD_PSEPG3.339e-4450.00Homogentisate 1,2-dioxygenase OS=Pseudomonas putid... [more]
HGD_PSEP13.339e-4450.00Homogentisate 1,2-dioxygenase OS=Pseudomonas putid... [more]
HGD_PSEPK4.352e-4450.00Homogentisate 1,2-dioxygenase OS=Pseudomonas putid... [more]
HGD_PSEF51.001e-4349.22Homogentisate 1,2-dioxygenase OS=Pseudomonas fluor... [more]
HGD_PSEU22.912e-4350.53Homogentisate 1,2-dioxygenase OS=Pseudomonas syrin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-030-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686935 ID=EY686935; Name=EY686935; organism=Citrus sinensis; type=EST; length=826bp
CCACCCGTCCGAGGATTGTTAGTGAGCTGCTGAGACACAAATGGAGAAGA
AGAGTCAACATCAATCATCATCATTAATCAGAAAAACGGACGGCGAAGAT
TTCTCTGATCTGAATTACGAGTCAGGATTCGGCAACAGCTTCTCGTCGGA
GGCGATCGACGGTGCGTTGCCACGTGGACAGAACAGCCCCCTCGTTTGTC
CGTTCGGTCTCTACGCCGAACAGATCTCCGGCACCTCCTTCACCTCCCCT
CGCAAGCTCAATCAACGCAGTTGGTTATACAGAATAAAACCTTCTGCAAC
ACATGAACCGTTTAAGCCTCGAGTGCCTGCTCATGGGAAGCTGGTGAGTG
AATTTGACAAGTCTAACAGTTACACTACGCCGACTCAGCTCCGGTGGAAG
CCGGTTGATATCCCTGATTCACCGACTGATTTTATTGACGGGTTGTACAC
GATATGTGGGGCTGGCAGCTCATTTCTTCGGCATGGATATGCTATTCACA
TGTACACTGCCAACAAATCAATGGACAACTGTGCCTTCTGTAATGCTGAT
GGAGATTTTTTGGTAGTTCCCCAAAAAGGAAGGCTGTGGATTGCTACTGA
ATGTGGAAAACTGGAAGTCTCTCCTGGCGAAATTGCCGTTTTACCTCAAG
GGTTTCGTTTTGCTGGAAGTTTACCAGATGGGCCATCCCCGTGGTTACAT
CGCCGAGAGTTTTGGGGCCCATGTTCCGGCTTCCTGATGTTGGCCCGCGA
CGGGGCGATGGTCGGGGTGGGCCGAAAGAGTGCCTGGGGCCGACGGGCGG
GCCCGTGAGAGGGCCCCCGGCTAGAG
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