EY686935

Overview
NameEY686935
Unique NameEY686935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHOP5 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisA53) GN=hmgA PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.351e-39
Identity = 87/199 (43.72%), Postives = 117/199 (58.79%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP--------TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            Y SGF NSF +EA+ GALP G+NSP  C +GLYAEQ+SG+ FT+PR  N+RSWLYRI+PS  H          G+  ++ D     T P         QLRW P  +P     F+ G+ T+  AG +  + G A H+Y    SM + AF NADG+ + VPQ+G L   TE G+++  PGEI V+P+G +F   L  GP+
Sbjct:   21 YMSGFKNSFETEALPGALPIGRNSPQRCAYGLYAEQLSGSPFTAPRGSNERSWLYRIRPSVKHS---------GRF-AKADVGLWRTAPCHEHEMPIAQLRWDPPPLPQHEQTFLQGVVTMTTAGDANTQAGMAAHIYLITASMVDQAFYNADGELMFVPQQGSLRFVTEFGRIDAGPGEIVVIPRGVKFRVELTGGPA 209          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHOPS (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisB5) GN=hmgA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.266e-38
Identity = 87/199 (43.72%), Postives = 118/199 (59.30%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP--------TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            Y SGFGNSF +EA+ GALP G+NSP    +GLYAEQ+SG+ FT+PR  N+RSWLYRI+PS  H          G+  ++ D     + P         QLRW    +P     F+ G+ T+  AG    + G A HMY  ++SM +  F NADG+ + VPQ+GRL + TE G + + P EIAV+P+G +F   L DGP+
Sbjct:   21 YMSGFGNSFETEALPGALPVGRNSPQRAAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKHS---------GRF-AKADMGLWRSAPCLEHDMPIAQLRWDAPPMPTEEVTFVQGVRTMTTAGDVNTQAGMAAHMYLISRSMVDQHFYNADGELMFVPQQGRLRLVTEFGVIAIEPAEIAVIPRGVKFRVELVDGPA 209          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHIE6 (Homogentisate 1,2-dioxygenase OS=Rhizobium etli (strain CIAT 652) GN=hmgA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.653e-38
Identity = 85/201 (42.29%), Postives = 119/201 (59.20%), Query Frame = 2
Query:   62 QSSSLIRKTDGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPT-QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            Q+S      D      L Y  GFGN F +E++ GALP+GQNSP  C +GLYAEQ+SG+ FT+PR  N+RSWLYRI+PS  H   +    A   L       + ++ P  QLRW P+  P+   +F++G+ TI  AG +  + G + H Y  N+ M +  F NADG+ L+VPQ G L + TE G ++V P EI ++P+G  F
Sbjct:    3 QTSIQASSGDAAAADQLKYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHT--RRFSNASYPLWKTAPCLDEHSLPLGQLRWDPIPPPEERLNFLEGVRTITTAGDATTQVGMSAHAYVFNEDMVDDYFFNADGELLIVPQLGALRVFTEMGIMDVEPSEICLVPRGMMF 201          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHOP2 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain HaA2) GN=hmgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.159e-38
Identity = 86/192 (44.79%), Postives = 113/192 (58.85%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP-TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688
            Y SGFGNSF +EA+ GALP G+NSP    +GLYAEQ+SG+ FT+PR  N+RSWLYRI+PS  H     R       +        Y  P  QLRW    +P     F+ G+ T+  AG    + G A HMY   +SM +  F NADG+ + VPQ+G L + TE G + + P EIAV+P+G +F   L DGP+
Sbjct:   21 YMSGFGNSFETEALPGALPIGRNSPQRAAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKH---SGRFTKADMGLWRSAPCLEYDMPIAQLRWDAPSMPQEDLTFLQGVRTMTTAGDVNTQAGMATHMYLITQSMVDQHFYNADGELMFVPQQGSLRLVTEFGVISIEPAEIAVIPRGVKFRVELVDGPA 209          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHILW (Homogentisate 1,2-dioxygenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=hmgA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.163e-38
Identity = 83/187 (44.39%), Postives = 115/187 (61.50%), Query Frame = 2
Query:  104 SDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPT-QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            S L Y  GFGN F +E++ GALP+GQNSP  C +GLYAEQ+SG+ FT+PR  N+RSWLYRI+PS  H   +    A   L       + ++ P  QLRW P+  P+    F++G+ TI  AG +  + G + H Y  N+ M +  F NADG+ L+VPQ G L + TE G ++V P EI ++P+G  F
Sbjct:   17 STLKYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHT--RRFSNASYPLWKTAPCLDEHSLPLGQLRWDPIPAPEERLTFLEGVRTITTAGDAATQVGMSAHAYVFNQDMVDDYFFNADGELLIVPQLGALRVFTEMGIMDVEPLEICLIPRGMMF 201          

HSP 2 Score: 21.557 bits (44), Expect = 3.163e-38
Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  654 FVLLEVYQMGHPRGYIAESFGA 719
            F +L+  +    RGYI E++GA
Sbjct:  201 FKILKTGEQAVWRGYICENYGA 222          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHISN (Homogentisate 1,2-dioxygenase OS=Rhizobium sp. (strain NGR234) GN=hmgA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.811e-38
Identity = 81/185 (43.78%), Postives = 111/185 (60.00%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVP-AHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            L Y  GFGN F +E++ GALP+GQNSP  C +GLYAEQ+SG+ FT+PR  N+RSWLYRI+PS  H     ++   H K       +       QLRW P+  P    +F+ G+ T+  AG    + G A H Y  N  M +  F NADG+ L+VP+ G L + TE GK++V+P EI ++P+G  F
Sbjct:   17 LAYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHTGRFAKIDYPHWKTAPHI--AEHALALGQLRWNPLPEPTGELNFLQGIRTMTTAGDVLTQVGMAAHAYVFNADMVDDYFFNADGELLIVPEMGALQVFTELGKMDVAPSEICLVPRGTMF 199          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHIL3 (Homogentisate 1,2-dioxygenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=hmgA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.206e-38
Identity = 85/198 (42.93%), Postives = 120/198 (60.61%), Query Frame = 2
Query:   77 IRKTDGE--DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPT-QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            I+ +DGE    + L Y  GFGN F +E++ GALP+GQNSP  C +GLYAEQ+SG+ FT+PR  N+RSWLYRI+PS  H   +    A   L       + ++ P  QLRW P+  P     F++G+ TI  AG +  + G + H Y  N+ M +  F NADG+ L+VPQ G + + TE G ++V P EI ++P+G  F
Sbjct:    6 IQTSDGEAATANTLKYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHT--RRFSNASYPLWKTAPCLDEHSLPLGQLRWDPIPAPAERLTFLEGVRTITTAGDAATQVGMSAHAYVFNEDMVDDYFFNADGELLIVPQLGAIRVFTEMGIMDVEPLEICLIPRGMMF 201          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_SINMW (Homogentisate 1,2-dioxygenase OS=Sinorhizobium medicae (strain WSM419) GN=hmgA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.400e-37
Identity = 79/195 (40.51%), Postives = 112/195 (57.44%), Query Frame = 2
Query:   80 RKTDGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVP-AHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            RK   +      Y  GFGN F +E++ G+LP+GQNSP  C +GLYAEQ+SG+ FT+PR  N+RSWLYRI+PS  H     ++   H K      + +      QLRW P+  P     F+ G+ T+  AG +  + G A H Y  N  M +  F NADG+ L+VP+ G   + TE G+++V P EI ++P+G  F
Sbjct:    9 RKAAPDQQRSAGYMPGFGNDFETESLPGSLPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHTGRFTKIDYPHWKTAPHTPEHS--LALGQLRWSPLPAPSQSLTFLQGIRTMTTAGDALTQVGMAAHAYAFNADMVDDYFFNADGELLIVPETGAFQVFTELGRIDVEPSEICLVPRGMMF 201          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHIEC (Homogentisate 1,2-dioxygenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=hmgA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.021e-36
Identity = 79/185 (42.70%), Postives = 113/185 (61.08%), Query Frame = 2
Query:  110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPT-QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            L Y  GFGN F +E++ GALP+GQNSP  C +GLYAEQ+SG+ FT+PR  N+RSWLYRI+PS  H   +    A   L       + ++ P  QLRW P+  P+    F+ G+ T+  AG +  + G + H Y  N+ M +  F +ADG+ L+VPQ G + + TE G ++V P EI ++P+G  F
Sbjct:   19 LKYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHT--RRFSNASYPLWKTAPCLDEHSLPLGQLRWDPIPAPEEKLTFLQGVRTMTTAGDAATQVGMSAHAYVFNEDMVDDYFFDADGELLIVPQLGAIRVFTEMGIMDVEPLEICLVPRGMMF 201          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_LEGPC (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila (strain Corby) GN=hmgA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.787e-32
Identity = 81/186 (43.55%), Postives = 106/186 (56.99%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYT---TPTQLRWKPV-DIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            Y  GFGN   SEA+ GALP  QNSP  C  GLYAEQ+SGT+FT PR  N RSWLYRI P+ T   + P          EF+  +S+    +P  +RW P+ +      DF++GL+ I  AGS  +      + Y  N SM +  F N DG+ L VP  G + + TE GKL +S G IAV+P+G +F
Sbjct:    2 YLQGFGNYHHSEAVKGALPPNQNSPQHCNLGLYAEQLSGTAFTRPRHNNLRSWLYRILPTVTQGTYYP---------YEFNIMHSFVDEFSPNAMRWSPLYNSSQIKCDFVEGLFHI--AGSPLVN----TYTYYCNHSMSDKYFANNDGELLFVPYAGEIHLYTEFGKLMLSSGSIAVIPRGVKF 172          
The following BLAST results are available for this feature:
BLAST of EY686935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
HGD_RHOP54.351e-3943.72Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas ... [more]
HGD_RHOPS1.266e-3843.72Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas ... [more]
HGD_RHIE61.653e-3842.29Homogentisate 1,2-dioxygenase OS=Rhizobium etli (s... [more]
HGD_RHOP22.159e-3844.79Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas ... [more]
HGD_RHILW3.163e-3844.39Homogentisate 1,2-dioxygenase OS=Rhizobium legumin... [more]
HGD_RHISN4.811e-3843.78Homogentisate 1,2-dioxygenase OS=Rhizobium sp. (st... [more]
HGD_RHIL38.206e-3842.93Homogentisate 1,2-dioxygenase OS=Rhizobium legumin... [more]
HGD_SINMW1.400e-3740.51Homogentisate 1,2-dioxygenase OS=Sinorhizobium med... [more]
HGD_RHIEC2.021e-3642.70Homogentisate 1,2-dioxygenase OS=Rhizobium etli (s... [more]
HGD_LEGPC8.787e-3243.55Homogentisate 1,2-dioxygenase OS=Legionella pneumo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-030-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686935 ID=EY686935; Name=EY686935; organism=Citrus sinensis; type=EST; length=826bp
CCACCCGTCCGAGGATTGTTAGTGAGCTGCTGAGACACAAATGGAGAAGA
AGAGTCAACATCAATCATCATCATTAATCAGAAAAACGGACGGCGAAGAT
TTCTCTGATCTGAATTACGAGTCAGGATTCGGCAACAGCTTCTCGTCGGA
GGCGATCGACGGTGCGTTGCCACGTGGACAGAACAGCCCCCTCGTTTGTC
CGTTCGGTCTCTACGCCGAACAGATCTCCGGCACCTCCTTCACCTCCCCT
CGCAAGCTCAATCAACGCAGTTGGTTATACAGAATAAAACCTTCTGCAAC
ACATGAACCGTTTAAGCCTCGAGTGCCTGCTCATGGGAAGCTGGTGAGTG
AATTTGACAAGTCTAACAGTTACACTACGCCGACTCAGCTCCGGTGGAAG
CCGGTTGATATCCCTGATTCACCGACTGATTTTATTGACGGGTTGTACAC
GATATGTGGGGCTGGCAGCTCATTTCTTCGGCATGGATATGCTATTCACA
TGTACACTGCCAACAAATCAATGGACAACTGTGCCTTCTGTAATGCTGAT
GGAGATTTTTTGGTAGTTCCCCAAAAAGGAAGGCTGTGGATTGCTACTGA
ATGTGGAAAACTGGAAGTCTCTCCTGGCGAAATTGCCGTTTTACCTCAAG
GGTTTCGTTTTGCTGGAAGTTTACCAGATGGGCCATCCCCGTGGTTACAT
CGCCGAGAGTTTTGGGGCCCATGTTCCGGCTTCCTGATGTTGGCCCGCGA
CGGGGCGATGGTCGGGGTGGGCCGAAAGAGTGCCTGGGGCCGACGGGCGG
GCCCGTGAGAGGGCCCCCGGCTAGAG
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