EY686935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHOP5 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisA53) GN=hmgA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.351e-39 Identity = 87/199 (43.72%), Postives = 117/199 (58.79%), Query Frame = 2 Query: 116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP--------TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688 Y SGF NSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H G+ ++ D T P QLRW P +P F+ G+ T+ AG + + G A H+Y SM + AF NADG+ + VPQ+G L TE G+++ PGEI V+P+G +F L GP+ Sbjct: 21 YMSGFKNSFETEALPGALPIGRNSPQRCAYGLYAEQLSGSPFTAPRGSNERSWLYRIRPSVKHS---------GRF-AKADVGLWRTAPCHEHEMPIAQLRWDPPPLPQHEQTFLQGVVTMTTAGDANTQAGMAAHIYLITASMVDQAFYNADGELMFVPQQGSLRFVTEFGRIDAGPGEIVVIPRGVKFRVELTGGPA 209
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHOPS (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisB5) GN=hmgA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.266e-38 Identity = 87/199 (43.72%), Postives = 118/199 (59.30%), Query Frame = 2 Query: 116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP--------TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688 Y SGFGNSF +EA+ GALP G+NSP +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H G+ ++ D + P QLRW +P F+ G+ T+ AG + G A HMY ++SM + F NADG+ + VPQ+GRL + TE G + + P EIAV+P+G +F L DGP+ Sbjct: 21 YMSGFGNSFETEALPGALPVGRNSPQRAAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKHS---------GRF-AKADMGLWRSAPCLEHDMPIAQLRWDAPPMPTEEVTFVQGVRTMTTAGDVNTQAGMAAHMYLISRSMVDQHFYNADGELMFVPQQGRLRLVTEFGVIAIEPAEIAVIPRGVKFRVELVDGPA 209
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHIE6 (Homogentisate 1,2-dioxygenase OS=Rhizobium etli (strain CIAT 652) GN=hmgA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.653e-38 Identity = 85/201 (42.29%), Postives = 119/201 (59.20%), Query Frame = 2 Query: 62 QSSSLIRKTDGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPT-QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661 Q+S D L Y GFGN F +E++ GALP+GQNSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H + A L + ++ P QLRW P+ P+ +F++G+ TI AG + + G + H Y N+ M + F NADG+ L+VPQ G L + TE G ++V P EI ++P+G F Sbjct: 3 QTSIQASSGDAAAADQLKYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHT--RRFSNASYPLWKTAPCLDEHSLPLGQLRWDPIPPPEERLNFLEGVRTITTAGDATTQVGMSAHAYVFNEDMVDDYFFNADGELLIVPQLGALRVFTEMGIMDVEPSEICLVPRGMMF 201
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHOP2 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain HaA2) GN=hmgA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.159e-38 Identity = 86/192 (44.79%), Postives = 113/192 (58.85%), Query Frame = 2 Query: 116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP-TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAGSLPDGPS 688 Y SGFGNSF +EA+ GALP G+NSP +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H R + Y P QLRW +P F+ G+ T+ AG + G A HMY +SM + F NADG+ + VPQ+G L + TE G + + P EIAV+P+G +F L DGP+ Sbjct: 21 YMSGFGNSFETEALPGALPIGRNSPQRAAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKH---SGRFTKADMGLWRSAPCLEYDMPIAQLRWDAPSMPQEDLTFLQGVRTMTTAGDVNTQAGMATHMYLITQSMVDQHFYNADGELMFVPQQGSLRLVTEFGVISIEPAEIAVIPRGVKFRVELVDGPA 209
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHILW (Homogentisate 1,2-dioxygenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=hmgA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.163e-38 Identity = 83/187 (44.39%), Postives = 115/187 (61.50%), Query Frame = 2 Query: 104 SDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPT-QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661 S L Y GFGN F +E++ GALP+GQNSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H + A L + ++ P QLRW P+ P+ F++G+ TI AG + + G + H Y N+ M + F NADG+ L+VPQ G L + TE G ++V P EI ++P+G F Sbjct: 17 STLKYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHT--RRFSNASYPLWKTAPCLDEHSLPLGQLRWDPIPAPEERLTFLEGVRTITTAGDAATQVGMSAHAYVFNQDMVDDYFFNADGELLIVPQLGALRVFTEMGIMDVEPLEICLIPRGMMF 201 HSP 2 Score: 21.557 bits (44), Expect = 3.163e-38 Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 3 Query: 654 FVLLEVYQMGHPRGYIAESFGA 719 F +L+ + RGYI E++GA Sbjct: 201 FKILKTGEQAVWRGYICENYGA 222
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHISN (Homogentisate 1,2-dioxygenase OS=Rhizobium sp. (strain NGR234) GN=hmgA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.811e-38 Identity = 81/185 (43.78%), Postives = 111/185 (60.00%), Query Frame = 2 Query: 110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVP-AHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661 L Y GFGN F +E++ GALP+GQNSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H ++ H K + QLRW P+ P +F+ G+ T+ AG + G A H Y N M + F NADG+ L+VP+ G L + TE GK++V+P EI ++P+G F Sbjct: 17 LAYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHTGRFAKIDYPHWKTAPHI--AEHALALGQLRWNPLPEPTGELNFLQGIRTMTTAGDVLTQVGMAAHAYVFNADMVDDYFFNADGELLIVPEMGALQVFTELGKMDVAPSEICLVPRGTMF 199
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHIL3 (Homogentisate 1,2-dioxygenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=hmgA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.206e-38 Identity = 85/198 (42.93%), Postives = 120/198 (60.61%), Query Frame = 2 Query: 77 IRKTDGE--DFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPT-QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661 I+ +DGE + L Y GFGN F +E++ GALP+GQNSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H + A L + ++ P QLRW P+ P F++G+ TI AG + + G + H Y N+ M + F NADG+ L+VPQ G + + TE G ++V P EI ++P+G F Sbjct: 6 IQTSDGEAATANTLKYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHT--RRFSNASYPLWKTAPCLDEHSLPLGQLRWDPIPAPAERLTFLEGVRTITTAGDAATQVGMSAHAYVFNEDMVDDYFFNADGELLIVPQLGAIRVFTEMGIMDVEPLEICLIPRGMMF 201
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_SINMW (Homogentisate 1,2-dioxygenase OS=Sinorhizobium medicae (strain WSM419) GN=hmgA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.400e-37 Identity = 79/195 (40.51%), Postives = 112/195 (57.44%), Query Frame = 2 Query: 80 RKTDGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVP-AHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661 RK + Y GFGN F +E++ G+LP+GQNSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H ++ H K + + QLRW P+ P F+ G+ T+ AG + + G A H Y N M + F NADG+ L+VP+ G + TE G+++V P EI ++P+G F Sbjct: 9 RKAAPDQQRSAGYMPGFGNDFETESLPGSLPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHTGRFTKIDYPHWKTAPHTPEHS--LALGQLRWSPLPAPSQSLTFLQGIRTMTTAGDALTQVGMAAHAYAFNADMVDDYFFNADGELLIVPETGAFQVFTELGRIDVEPSEICLVPRGMMF 201
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_RHIEC (Homogentisate 1,2-dioxygenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=hmgA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.021e-36 Identity = 79/185 (42.70%), Postives = 113/185 (61.08%), Query Frame = 2 Query: 110 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPT-QLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661 L Y GFGN F +E++ GALP+GQNSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H + A L + ++ P QLRW P+ P+ F+ G+ T+ AG + + G + H Y N+ M + F +ADG+ L+VPQ G + + TE G ++V P EI ++P+G F Sbjct: 19 LKYMPGFGNDFETESLPGALPQGQNSPQKCNYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVRHT--RRFSNASYPLWKTAPCLDEHSLPLGQLRWDPIPAPEEKLTFLQGVRTMTTAGDAATQVGMSAHAYVFNEDMVDDYFFDADGELLIVPQLGAIRVFTEMGIMDVEPLEICLVPRGMMF 201
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_LEGPC (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila (strain Corby) GN=hmgA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.787e-32 Identity = 81/186 (43.55%), Postives = 106/186 (56.99%), Query Frame = 2 Query: 116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYT---TPTQLRWKPV-DIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661 Y GFGN SEA+ GALP QNSP C GLYAEQ+SGT+FT PR N RSWLYRI P+ T + P EF+ +S+ +P +RW P+ + DF++GL+ I AGS + + Y N SM + F N DG+ L VP G + + TE GKL +S G IAV+P+G +F Sbjct: 2 YLQGFGNYHHSEAVKGALPPNQNSPQHCNLGLYAEQLSGTAFTRPRHNNLRSWLYRILPTVTQGTYYP---------YEFNIMHSFVDEFSPNAMRWSPLYNSSQIKCDFVEGLFHI--AGSPLVN----TYTYYCNHSMSDKYFANNDGELLFVPYAGEIHLYTEFGKLMLSSGSIAVIPRGVKF 172 The following BLAST results are available for this feature:
BLAST of EY686935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >EY686935 ID=EY686935; Name=EY686935; organism=Citrus sinensis; type=EST; length=826bpback to top |