EY686935

Overview
NameEY686935
Unique NameEY686935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_LEGPL (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila (strain Lens) GN=hmgA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.148e-31
Identity = 83/184 (45.11%), Postives = 103/184 (55.98%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKP-RVPAHGKLVSEFDKSNSYTTPTQLRWKPV-DIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            Y  GFGN   SEA+ GALP  QNSP  C  GLYAEQ+SGTSFT PR  N RSWLYRI P+ T   + P        LV E        +P  +RW P+ +      DF++GL+ I G   S L + Y    Y  N SM +  F N DG+ L VP  G + + TE GKL +S G IAV+P+G +F
Sbjct:    2 YLQGFGNYHHSEAVKGALPPNQNSPQHCSLGLYAEQLSGTSFTRPRHNNLRSWLYRILPTVTQGTYYPYEFNIMQPLVDEL-------SPNAMRWSPLYNSSQIKCDFVEGLFHIAG---SPLVNAYT---YYCNHSMSDKYFANNDGELLFVPYTGEIHLHTEFGKLMLSSGSIAVIPRGVKF 172          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_LEGPA (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila (strain Paris) GN=hmgA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.148e-31
Identity = 81/186 (43.55%), Postives = 104/186 (55.91%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYT---TPTQLRWKPV-DIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            Y  GFGN   SEA+ GALP  QNSP  C  GLYAEQ+SGTSFT PR  N RSWLYRI P+ T   + P          EF+    +    +P  +RW P+ +      DF++GL+ I  AGS  +      + Y  N SM +  F N DG+ L VP  G + + TE GKL +S G IAV+P+G +F
Sbjct:    2 YLQGFGNYHHSEAVKGALPTNQNSPQHCSLGLYAEQLSGTSFTRPRHNNLRSWLYRILPTVTQGTYYP---------YEFNVMQPFVDELSPNAMRWSPLYNSSQIKCDFVEGLFHI--AGSPLVN----TYTYYCNHSMSDKYFANNDGELLFVPYAGEIHLHTEFGKLILSSGSIAVIPRGVKF 172          
BLAST of EY686935 vs. ExPASy Swiss-Prot
Match: HGD_LEGPH (Homogentisate 1,2-dioxygenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hmgA PE=3 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.339e-31
Identity = 80/186 (43.01%), Postives = 104/186 (55.91%), Query Frame = 2
Query:  116 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYT---TPTQLRWKPV-DIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRF 661
            Y  GFGN   SEA+ GALP  QNSP  C  GLYAEQ+SGT+FT PR  N RSWLYRI P+ T   + P          EF+    +    +P  +RW P+ +      DF++GL+ I  AGS  +      + Y  N SM +  F N DG+ L VP  G + + TE GKL +S G IAV+P+G +F
Sbjct:    2 YLQGFGNYHHSEAVKGALPPNQNSPQHCSLGLYAEQLSGTAFTRPRHNNLRSWLYRILPTVTQGTYYP---------YEFNIMQPFVDELSPNAMRWSPLYNSSQIKCDFVEGLFHI--AGSPLVN----TYTYYCNHSMSDKYFANNDGELLFVPYAGEIHLHTEFGKLMLSSGSIAVIPRGVKF 172          
The following BLAST results are available for this feature:
BLAST of EY686935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
HGD_LEGPL1.148e-3145.11Homogentisate 1,2-dioxygenase OS=Legionella pneumo... [more]
HGD_LEGPA1.148e-3143.55Homogentisate 1,2-dioxygenase OS=Legionella pneumo... [more]
HGD_LEGPH3.339e-3143.01Homogentisate 1,2-dioxygenase OS=Legionella pneumo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-030-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686935 ID=EY686935; Name=EY686935; organism=Citrus sinensis; type=EST; length=826bp
CCACCCGTCCGAGGATTGTTAGTGAGCTGCTGAGACACAAATGGAGAAGA
AGAGTCAACATCAATCATCATCATTAATCAGAAAAACGGACGGCGAAGAT
TTCTCTGATCTGAATTACGAGTCAGGATTCGGCAACAGCTTCTCGTCGGA
GGCGATCGACGGTGCGTTGCCACGTGGACAGAACAGCCCCCTCGTTTGTC
CGTTCGGTCTCTACGCCGAACAGATCTCCGGCACCTCCTTCACCTCCCCT
CGCAAGCTCAATCAACGCAGTTGGTTATACAGAATAAAACCTTCTGCAAC
ACATGAACCGTTTAAGCCTCGAGTGCCTGCTCATGGGAAGCTGGTGAGTG
AATTTGACAAGTCTAACAGTTACACTACGCCGACTCAGCTCCGGTGGAAG
CCGGTTGATATCCCTGATTCACCGACTGATTTTATTGACGGGTTGTACAC
GATATGTGGGGCTGGCAGCTCATTTCTTCGGCATGGATATGCTATTCACA
TGTACACTGCCAACAAATCAATGGACAACTGTGCCTTCTGTAATGCTGAT
GGAGATTTTTTGGTAGTTCCCCAAAAAGGAAGGCTGTGGATTGCTACTGA
ATGTGGAAAACTGGAAGTCTCTCCTGGCGAAATTGCCGTTTTACCTCAAG
GGTTTCGTTTTGCTGGAAGTTTACCAGATGGGCCATCCCCGTGGTTACAT
CGCCGAGAGTTTTGGGGCCCATGTTCCGGCTTCCTGATGTTGGCCCGCGA
CGGGGCGATGGTCGGGGTGGGCCGAAAGAGTGCCTGGGGCCGACGGGCGG
GCCCGTGAGAGGGCCCCCGGCTAGAG
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