EY711118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: PRP22_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 OS=Saccharomyces cerevisiae GN=PRP22 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 5.292e-62 Identity = 124/251 (49.40%), Postives = 171/251 (68.13%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVNDNFVNHRALKSAGNGKHSL 798 RK+V +TNIAETS+TIDGI YV+DPGFAK +YN R +E L+VSPIS+A A+QR GRAGRT PGKC+RLYTE +F N++ T PEI R NL++T+L LK +GI+DL+ FDFMDPP ++ AL L +L +LDD+G LT +G++MS FP+DP +S+ L+ S CS+EI++I +MLSV N F RP++ Q AD K++ + H +G L ++Q NF++ R LK A + K + Sbjct: 751 RKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAK-FHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQI 1000
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: CDC28_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 OS=Schizosaccharomyces pombe GN=cdc28 PE=2 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 9.981e-61 Identity = 116/202 (57.43%), Postives = 153/202 (75.74%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAML-SVPNCFVRPREAQKAADEAKS 648 RK+V++TNIAETS+TIDG+ +VID GF KQ +YNPR +ESL+ P S+ASA QR+GRAGR PGKCFRLYT +++NN+L T PEI R+NL N VL LK LGI++L+ FDFMD P PETLMR+LE+L LGAL++ G LT++G +M+EFP DP +SK L+ S KY C E+LSI +ML + F RP++ AD+A++ Sbjct: 687 RKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARA 888
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: PRP16_HUMAN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo sapiens GN=DHX38 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 2.458e-59 Identity = 119/247 (48.18%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*M-YTMLYKQTWRIH----LGVNDNFVNHRALK 771 RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+ ++ +D+ + + + +P + Y +Y Q W+ + + ND+F++ +A++ Sbjct: 799 RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK-----FAVPESDHLTYLNVYLQ-WKNNNYSTIWCNDHFIHAKAMR 1039
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: PRP16_BOVIN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos taurus GN=DHX38 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.458e-59 Identity = 119/247 (48.18%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*M-YTMLYKQTWRIH----LGVNDNFVNHRALK 771 RK +V+TNIAETSLT+DGI++VID G+ K KV+NPR+ +++L + PIS+A+A+QRSGRAGRT PG+CFRLYT+ ++ N+L T PEI R+NLAN VL LK LG+ DL+ F FMDPP + ++ ++ L LGALD+ G LT G M EFPLDP +SKML+ S CS+EIL I +MLSVP F RP+ ++ +D+ + + + +P + Y +Y Q W+ + + ND+F++ +A++ Sbjct: 799 RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK-----FAVPESDHLSYLNVYLQ-WKNNNYSTIWCNDHFIHAKAMR 1039
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: PRP16_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Saccharomyces cerevisiae GN=PRP16 PE=1 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 3.038e-56 Identity = 109/203 (53.69%), Postives = 154/203 (75.86%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGI-DDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQ 651 RKI+++TNIAETSLTI GI YVID G++K KVYNP++ ++SL+++PISKA+A QRSGRAGRT PG +RLYTE +F D+ QT PEI R+NL+NT+L LK L + D+L F F+D P +T + +L L ++GA+D G LT +G +M++FPL P +SK+L+ + + CS+E+L+I +MLSVP F RP+E QK AD A+++ Sbjct: 632 RKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIARNK 834 HSP 2 Score: 22.3274 bits (46), Expect = 3.038e-56 Identity = 10/21 (47.62%), Postives = 12/21 (57.14%), Query Frame = 3 Query: 672 DPLTLLNVYHALQANMEDPSW 734 D LTLLNV+ +AN W Sbjct: 841 DHLTLLNVFEQWRANNFSSHW 861
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: PRP16_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 OS=Schizosaccharomyces pombe GN=prp16 PE=2 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 5.667e-56 Identity = 114/255 (44.71%), Postives = 174/255 (68.24%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHLGVND----NFVNHRALKSAGNGKHSL 798 RK+VV+TNIAETSLT+ GI YV+D G+ K K+YN ++ +++L V+PIS+A+A+QR+GRAGRT PG +RLYTE ++ ++ T PEI R+NL+NTVL LK LG++++ FDFMD P +TLM +L L LGALD+ G LT +G+KMS FP+DP +SK+++ + Y C+ EI++I +MLSVP+ F RP+E + +D A+ + + +P + + Q W+ + N +F++ + LK A + + L Sbjct: 759 RKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREK-----FNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQL 1008
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX35_PONAB (Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.823e-54 Identity = 106/197 (53.81%), Postives = 147/197 (74.62%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAA 633 RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P + A Sbjct: 336 RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQA 531
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX35_HUMAN (Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35 PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 2.381e-54 Identity = 105/190 (55.26%), Postives = 145/190 (76.32%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTE-MGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP 612 RK++V+TN+AETS+TI GIVYVID GF K + YNPR +E L+V P+S+ASA+QR+GR GR++ GKC+RLYTE++F+ L T PE+ RSNLA +L LK LGID+++ F FM PP +++++ALE+L LG LD D LTE +G +++EFPL+P +KML+ES + CS EILSI+AM+ + N FV P Sbjct: 336 RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVP 524
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: PRH1_SCHPO (Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces pombe GN=prh1 PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 3.330e-48 Identity = 108/252 (42.86%), Postives = 163/252 (64.68%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQVWSH*WGIPLHS*MYTMLYKQTWRIHL---------GVNDNFVNHRALKS 774 RK+V+STNIAETS+TI GI YVID G AK K +N ++ +ESL V PIS+++A QRSGRAGR G+C+R+YTE F+ L +T PEI R +L+ VLTLK G +D+++F +MDPP+ E L+RALE L +GALDD+G++ ++G +MS PL P +++ ++ + ++NC +E++ + + LS + F+ P+E + A EA+ + LHS + R +L + NF+N RALK+ Sbjct: 364 RKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDK-LPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKF--------LHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKT 606
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX40_HUMAN (Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40 PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 1.184e-45 Identity = 95/200 (47.50%), Postives = 135/200 (67.50%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP--REAQKAADE 639 RK V+STNI+ TSLTIDGI YV+D GF KQ +NPR+ ++ L V PISK+ A QRSGRAGRT GKCFR+Y++ +N + PEI R++L + VLTLK L I D++ F ++DPP ++ AL+ L A+D G++T +G M EFPL P ++ ++++ +C + +L I+AMLSV N F+RP E QK A++ Sbjct: 339 RKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQ 538 The following BLAST results are available for this feature:
BLAST of EY711118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711118 ID=EY711118; Name=EY711118; organism=Citrus sinensis; type=EST; length=883bpback to top |