EY711118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX29_XENLA (ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.718e-28 Identity = 76/206 (36.89%), Postives = 122/206 (59.22%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKK--LGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQV 654 RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + ISKASA QR GRAGR + G CFRLYT + F + ++ + PEILR L L + K LG + +DPP + + A+ +L +GA + LT +G+ ++ P++ ++ KML+ + C + + +++A ++ + FV P + AD AKS + Sbjct: 919 RKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFISKASALQRQGRAGRVRNGYCFRLYTRERFESFME-YSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDAVATLAATMTEKSPFVTPIGEKDRADLAKSSM 1123
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX29_HUMAN (ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 5.000e-28 Identity = 72/204 (35.29%), Postives = 119/204 (58.33%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKS 648 RKIV++TNIAET +TI +V+VID G K+ Y+ ++ SL+ + +SKASA QR GRAGR + G CFR+YT + F + PEILR L L + K + F +DPP + + A+ +L +GA + ++ LT +G+ ++ P++ ++ KML+ + C + + +++A+++ + F P + AD AKS Sbjct: 924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEG-FMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKS 1126
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: KZ_DROME (Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster GN=kz PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.900e-27 Identity = 75/195 (38.46%), Postives = 108/195 (55.38%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL--------DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFV 606 R VVSTN+AETSLTI I YV+D G K ++Y+ V + +V+ SKASA QR+GRAGR G C+RLY+ +N+ + + P+I + + + +L ++ +GID +VHF F PP L A L LGAL D +T +G +S FP+ P+ KML S + N + + A LSV + Sbjct: 643 RLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLI 837
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: YL419_YEAST (Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces cerevisiae GN=YLR419W PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.100e-26 Identity = 70/186 (37.63%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDD-DGNLTEMGEKMSEFP-LDPQMSKMLVESPKYNCSNEILSISAMLSV 591 RK+VVSTNIAETS+TID V ID G AK YNP+ L+ S ISKA QR GRAGR + G ++L+++ + ND+ PEI R L + L++K +GI D+ F +D P L +A +L +G +D+ D +LT++G+ +S P +D + K+L+ + C++ + + ++L + Sbjct: 917 RKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGI 1102
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: YUM14_USTMA (Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis GN=UM11114 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26 Identity = 71/208 (34.13%), Postives = 117/208 (56.25%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH---FDFMDPPAPETLMRALEVLNYLGALDDD----GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKS 648 RKIVVSTN+AETS+TI + YV+D G K+ + P + L+ S+A+ QR GRAGR + G+CFRLY+ + Q PE+ R L + L +K + D+ V +DPP+ ++ AL L GAL D LT +G+ +++ PLD +++K+L+ + C +L++++++S F P E ++ A +A++ Sbjct: 1081 RKIVVSTNVAETSITIPDVSYVVDTGRVKETRFEPESGLTRLVECWASRAACKQRRGRAGRVRAGECFRLYSRYVDEKKMAAQQTPEMRRVPLESLFLEVKSMREDEDVKEYLNKALDPPSLASMDAALTNLIEAGALQSDRGYKSRLTSLGKHLAQLPLDLRLAKLLIMGTIFGCLGPMLTVASIMSCKPLFNTPFEKREEASKARA 1288
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: TDRD9_HUMAN (Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25 Identity = 69/201 (34.33%), Postives = 110/201 (54.73%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDD--LVHFDFMDPPAPETLMRALEVLNYLGAL----------DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP 612 RKI++STNIAE+S+T+ + YVID + V + +SL +S SK S +QR GRAGR G C+RL + ++N + PE+LR L +T+L +K L + + + + PP + R + +L +GAL DG LT +G +++ P++ Q+ K++V + C +E L I+A LS+ N F P Sbjct: 285 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMP 485
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: RHA2_CAEEL (Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans GN=rha-2 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25 Identity = 70/189 (37.04%), Postives = 105/189 (55.56%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD-------DGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 591 R V+STN+AETSLTI G+ YVID GF K+++Y+ V V IS+AS QR+GRAGR G +RLY+ + D PEIL VL LK + I +V+F F P + L A + L LGAL + + +T++G+ ++ FPL P +K + + ++N + + + ++LSV Sbjct: 601 RLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVY-QDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSV 788
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX9_XENLA (ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25 Identity = 64/188 (34.04%), Postives = 106/188 (56.38%), Query Frame = 1 Query: 49 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFV 606 K+++STNIAETS+TI+ +VYVID K K++ + + SK + QR GRAGR +PG CF L ++ F+ L+ PEI R+ L L++K L + + HF ++PP + ++ A L L ALD + LT +G +++ P++P++ KM++ + + + +ISA P F+ Sbjct: 710 KVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDK-LETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFI 896
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: TDRD9_RAT (Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus GN=Tdrd9 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24 Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 1 Query: 46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDD--LVHFDFMDPPAPETLMRALEVLNYLGAL----------DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP 612 RKI++STNIAE+S+T+ + YVID + V + +SL +S SK S QR GRAGR G C+RL +++ + PE+LR L +TVL +K L + + + + PP+ + R + +L +GAL DG LT +G +++ P+ Q+ K++V + C +E L I+A LS+ N F P Sbjct: 285 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTMP 485
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: MLE_DROME (Dosage compensation regulator OS=Drosophila melanogaster GN=mle PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24 Identity = 65/182 (35.71%), Postives = 104/182 (57.14%), Query Frame = 1 Query: 49 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588 KI++STNIAETS+TID IV+VID A+ K++ + S SK + QR GRAGR +PG CF L + F L+ PE+ R+ L LT+K L + + HF ++PP + ++ A +L + LD + LT +G ++ P++P++ KM+V + C+ ++++I A S Sbjct: 712 KIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARF-QALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCA-DLMAIMASYS 891 The following BLAST results are available for this feature:
BLAST of EY711118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711118 ID=EY711118; Name=EY711118; organism=Citrus sinensis; type=EST; length=883bpback to top |