EY711118

Overview
NameEY711118
Unique NameEY711118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX29_XENLA (ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.718e-28
Identity = 76/206 (36.89%), Postives = 122/206 (59.22%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKK--LGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKSQV 654
            RKIV++TNIAET +TI  +V+VID G  K+  Y+   ++ SL+ + ISKASA QR GRAGR + G CFRLYT + F + ++  + PEILR  L    L + K  LG  +      +DPP  + +  A+ +L  +GA +     LT +G+ ++  P++ ++ KML+    + C + + +++A ++  + FV P   +  AD AKS +
Sbjct:  919 RKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFISKASALQRQGRAGRVRNGYCFRLYTRERFESFME-YSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDAVATLAATMTEKSPFVTPIGEKDRADLAKSSM 1123          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX29_HUMAN (ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.000e-28
Identity = 72/204 (35.29%), Postives = 119/204 (58.33%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALD-DDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKS 648
            RKIV++TNIAET +TI  +V+VID G  K+  Y+   ++ SL+ + +SKASA QR GRAGR + G CFR+YT + F       + PEILR  L    L + K  +     F    +DPP  + +  A+ +L  +GA + ++  LT +G+ ++  P++ ++ KML+    + C + + +++A+++  + F  P   +  AD AKS
Sbjct:  924 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEG-FMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKS 1126          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: KZ_DROME (Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster GN=kz PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.900e-27
Identity = 75/195 (38.46%), Postives = 108/195 (55.38%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL--------DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFV 606
            R  VVSTN+AETSLTI  I YV+D G  K ++Y+    V + +V+  SKASA QR+GRAGR   G C+RLY+   +N+  +  + P+I +  + + +L ++ +GID +VHF F  PP    L  A   L  LGAL        D    +T +G  +S FP+ P+  KML  S + N     + + A LSV    +
Sbjct:  643 RLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLI 837          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: YL419_YEAST (Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces cerevisiae GN=YLR419W PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.100e-26
Identity = 70/186 (37.63%), Postives = 110/186 (59.14%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDD-DGNLTEMGEKMSEFP-LDPQMSKMLVESPKYNCSNEILSISAMLSV 591
            RK+VVSTNIAETS+TID  V  ID G AK   YNP+     L+ S ISKA   QR GRAGR + G  ++L+++  + ND+     PEI R  L +  L++K +GI D+  F    +D P    L +A  +L  +G +D+ D +LT++G+ +S  P +D +  K+L+    + C++  + + ++L +
Sbjct:  917 RKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGI 1102          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: YUM14_USTMA (Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis GN=UM11114 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26
Identity = 71/208 (34.13%), Postives = 117/208 (56.25%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH---FDFMDPPAPETLMRALEVLNYLGALDDD----GNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRPREAQKAADEAKS 648
            RKIVVSTN+AETS+TI  + YV+D G  K+  + P   +  L+    S+A+  QR GRAGR + G+CFRLY+       +  Q  PE+ R  L +  L +K +  D+ V       +DPP+  ++  AL  L   GAL  D      LT +G+ +++ PLD +++K+L+    + C   +L++++++S    F  P E ++ A +A++
Sbjct: 1081 RKIVVSTNVAETSITIPDVSYVVDTGRVKETRFEPESGLTRLVECWASRAACKQRRGRAGRVRAGECFRLYSRYVDEKKMAAQQTPEMRRVPLESLFLEVKSMREDEDVKEYLNKALDPPSLASMDAALTNLIEAGALQSDRGYKSRLTSLGKHLAQLPLDLRLAKLLIMGTIFGCLGPMLTVASIMSCKPLFNTPFEKREEASKARA 1288          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: TDRD9_HUMAN (Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25
Identity = 69/201 (34.33%), Postives = 110/201 (54.73%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDD--LVHFDFMDPPAPETLMRALEVLNYLGAL----------DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP 612
            RKI++STNIAE+S+T+  + YVID    +  V +     +SL +S  SK S +QR GRAGR   G C+RL  +  ++N +     PE+LR  L +T+L +K L + +   +    + PP    + R + +L  +GAL            DG LT +G  +++ P++ Q+ K++V    + C +E L I+A LS+ N F  P
Sbjct:  285 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFAMP 485          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: RHA2_CAEEL (Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans GN=rha-2 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25
Identity = 70/189 (37.04%), Postives = 105/189 (55.56%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD-------DGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSV 591
            R  V+STN+AETSLTI G+ YVID GF K+++Y+    V    V  IS+AS  QR+GRAGR   G  +RLY+   +  D      PEIL       VL LK + I  +V+F F   P  + L  A + L  LGAL +       +  +T++G+ ++ FPL P  +K +  + ++N  +  + + ++LSV
Sbjct:  601 RLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVY-QDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSV 788          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: DHX9_XENLA (ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25
Identity = 64/188 (34.04%), Postives = 106/188 (56.38%), Query Frame = 1
Query:   49 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFV 606
            K+++STNIAETS+TI+ +VYVID    K K++     + +      SK +  QR GRAGR +PG CF L ++  F+  L+    PEI R+ L    L++K L +  + HF    ++PP  + ++ A   L  L ALD +  LT +G  +++ P++P++ KM++    +   + + +ISA    P  F+
Sbjct:  710 KVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDK-LETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFI 896          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: TDRD9_RAT (Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus GN=Tdrd9 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 1
Query:   46 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDD--LVHFDFMDPPAPETLMRALEVLNYLGAL----------DDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLSVPNCFVRP 612
            RKI++STNIAE+S+T+  + YVID    +  V +     +SL +S  SK S  QR GRAGR   G C+RL     +++ +     PE+LR  L +TVL +K L + +   +    + PP+   + R + +L  +GAL            DG LT +G  +++ P+  Q+ K++V    + C +E L I+A LS+ N F  P
Sbjct:  285 RKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTMP 485          
BLAST of EY711118 vs. ExPASy Swiss-Prot
Match: MLE_DROME (Dosage compensation regulator OS=Drosophila melanogaster GN=mle PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 65/182 (35.71%), Postives = 104/182 (57.14%), Query Frame = 1
Query:   49 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTEMGEKMSEFPLDPQMSKMLVESPKYNCSNEILSISAMLS 588
            KI++STNIAETS+TID IV+VID   A+ K++     + S      SK +  QR GRAGR +PG CF L +   F   L+    PE+ R+ L    LT+K L +  + HF    ++PP  + ++ A  +L  +  LD +  LT +G  ++  P++P++ KM+V    + C+ ++++I A  S
Sbjct:  712 KIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARF-QALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCA-DLMAIMASYS 891          
The following BLAST results are available for this feature:
BLAST of EY711118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
DHX29_XENLA1.718e-2836.89ATP-dependent RNA helicase DHX29 OS=Xenopus laevis... [more]
DHX29_HUMAN5.000e-2835.29ATP-dependent RNA helicase DHX29 OS=Homo sapiens G... [more]
KZ_DROME1.900e-2738.46Probable ATP-dependent RNA helicase kurz OS=Drosop... [more]
YL419_YEAST2.100e-2637.63Putative ATP-dependent RNA helicase YLR419W OS=Sac... [more]
YUM14_USTMA2.743e-2634.13Putative DEAH-box ATP-dependent helicase UM11114 O... [more]
TDRD9_HUMAN5.174e-2534.33Putative ATP-dependent RNA helicase TDRD9 OS=Homo ... [more]
RHA2_CAEEL5.174e-2537.04Putative ATP-dependent RNA helicase rha-2 OS=Caeno... [more]
DHX9_XENLA8.825e-2534.04ATP-dependent RNA helicase A-like protein OS=Xenop... [more]
TDRD9_RAT4.380e-2434.33Putative ATP-dependent RNA helicase TDRD9 OS=Rattu... [more]
MLE_DROME4.380e-2435.71Dosage compensation regulator OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-A03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711118 ID=EY711118; Name=EY711118; organism=Citrus sinensis; type=EST; length=883bp
TTTGAACCTGCTCCACCTCCAAGTAAGGAAGGTGGCCCCCCTGGAAGAAA
GATTGTGGTCTCTACAAACATAGCAGAAACTTCTTTGACCATAGATGGGA
TAGTTTATGTTATAGACCCAGGTTTTGCTAAACAAAAAGTTTATAATCCA
CGTGTGCGTGTGGAATCGTTATTGGTTTCTCCAATATCGAAAGCAAGTGC
ACATCAGCGGTCTGGGCGTGCTGGAAGAACTCAGCCAGGAAAATGTTTCC
GACTCTACACTGAGAAAAGTTTTAATAATGATCTGCAGCCGCAGACATAT
CCAGAAATATTACGTTCAAACCTTGCAAATACAGTCCTTACATTAAAGAA
GCTGGGTATTGATGATTTAGTGCATTTTGATTTTATGGACCCTCCTGCTC
CTGAGACACTGATGCGAGCATTAGAAGTTTTGAATTATTTGGGAGCACTG
GACGATGATGGAAACCTGACTGAAATGGGGGAGAAGATGAGTGAATTTCC
ACTAGATCCTCAAATGTCGAAGATGCTCGTTGAGAGTCCTAAATACAACT
GCTCAAATGAAATTCTTTCCATTTCTGCCATGCTTTCAGTACCCAATTGC
TTTGTCCGGCCTAGGGAGGCTCAAAAAGCTGCAGATGAAGCAAAAAGCCA
GGTTTGGTCACATTGATGGGGGATCCCCTTACACTCCTGAATGTATACCA
TGCTTTACAAGCAAACATGGAGGATCCATCTTGGGGTTAATGACAATTTT
GTCAATCATAGGGCATTGAAGTCCGCTGGAAATGGTAAACACAGCTTGTT
TCGATCATGGCCCGGGTCAACCTCAAGTTTGCAGCATGATTTTAAGGTCG
GGACTACTTGGCAACTTCAAAAAGCATGGTGGG
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